| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032016.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 1.5e-52 | 44.12 | Show/hide |
Query: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEIS-----------------------------------------
MDSL+ FGQP S+ H+AIKY+Y RMKEG+SV+EHVL++M+HF++AEVNG ++E +
Subjt: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEIS-----------------------------------------
Query: ------SDAEANVATTSKRKFHKGSSSGSKSGPSYQKKGIQKKKKDNVKVKAPAATKGEEKIAKEKCFHCNENGHWKRNCPEYLVKKRAEKESK------
+ EANV TT+K KF +GSSS SKSGPS + I+KK K K P KG++ K KC+HC ENGH RNCP+YL +K+ K+ K
Subjt: ------SDAEANVATTSKRKFHKGSSSGSKSGPSYQKKGIQKKKKDNVKVKAPAATKGEEKIAKEKCFHCNENGHWKRNCPEYLVKKRAEKESK------
Query: --------DEKVVVSINATFLEEDHIQDHKPCSKLVLEEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEMREPRRSGRVLRQPDRYMSLIETK
+ KV VS NA FLEEDHI++H+ SKLVLEEISK+ATD+ + ST+V ++ G +HP QE+ EPRRSGRV+RQPDRY+ L E +
Subjt: --------DEKVVVSINATFLEEDHIQDHKPCSKLVLEEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEMREPRRSGRVLRQPDRYMSLIETK
Query: VTIPDD
+ IPDD
Subjt: VTIPDD
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| KAA0050670.1 gag/pol protein [Cucumis melo var. makuwa] | 7.9e-41 | 33.64 | Show/hide |
Query: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEIS-----------------------------------------
MDSL+ FGQ S I HDA+ Y+YN RM EG+SV+EHVLNMMVHFNVAE+NGAV++E S
Subjt: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEIS-----------------------------------------
Query: ------SDAEANVATTSKRKFHKGSSSGSKSGPSYQKKGIQKKKKDNVKVKA---PAATKGEEKIAKEKCFHCNENGHWKRNCPEYLVKKRAEKES----
EANVA TS RKFH+G + G+KS PS KKKK KA A T + K AK CFHCN+ GHWKRNCP+YL +K+ K+
Subjt: ------SDAEANVATTSKRKFHKGSSSGSKSGPSYQKKGIQKKKKDNVKVKA---PAATKGEEKIAKEKCFHCNENGHWKRNCPEYLVKKRAEKES----
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------KDEKVVVSINATFLEEDHIQDHKPCSKLVLEEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEM
KD KV VS NATFLEEDHI++HKPCSK+VL ++SK+ T+ STRVV++ TRV + S+ +H PQ +
Subjt: ------------------------------KDEKVVVSINATFLEEDHIQDHKPCSKLVLEEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEM
Query: REPRRSGRVLRQPDRYMSLIETKVTIPD
REPRRSGRV P RYMSL ET I D
Subjt: REPRRSGRVLRQPDRYMSLIETKVTIPD
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| KAA0056663.1 gag/pol protein [Cucumis melo var. makuwa] | 4.2e-42 | 35.62 | Show/hide |
Query: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEIS--------SDAEANVATTSKRKFHKGSSSGSKSGPSYQKKG
MD+L+A FGQP S+ H+AIKY+ RMKEG+SV+EHVL+MM+H N+AEVNG V++E + EANV TT KRKF +GSSS +K GPS K
Subjt: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEIS--------SDAEANVATTSKRKFHKGSSSGSKSGPSYQKKG
Query: IQKKKKDNVKVKAPAATKGEEKIAKEKCFHCNENGHWKRNCPEYLVKKRAEKES----------------------------------------------
I+KK+K + P KG++ K KC+HC++ GHW RNCP+YL KK+AEKE
Subjt: IQKKKKDNVKVKAPAATKGEEKIAKEKCFHCNENGHWKRNCPEYLVKKRAEKES----------------------------------------------
Query: ------------------------------------------------------------------------------KDEKVVVSINATFLEEDHIQDH
++ KV VS NAT L+EDHI++H
Subjt: ------------------------------------------------------------------------------KDEKVVVSINATFLEEDHIQDH
Query: KPCSKLVLEEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEMREPRRSGRVLRQPDRYM
+P SKLVL EISK A DK + ST+V ++ G +HP QE+REPRRSGRV+ QPDRY+
Subjt: KPCSKLVLEEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEMREPRRSGRVLRQPDRYM
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| KAA0066192.1 gag/pol protein [Cucumis melo var. makuwa] | 2.7e-41 | 43.73 | Show/hide |
Query: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEISSDAEANVATTSKRKFHKGSSSGSKSGPSYQKKGIQKKKKDN
MD LR FGQ S I +AIKYVYN MKE +V+EHVL+M+V+FN + EAN A R+F SS GSK IQ +K
Subjt: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEISSDAEANVATTSKRKFHKGSSSGSKSGPSYQKKGIQKKKKDN
Query: VKVKAPAAT-KGEEKIA-KEKCFHCNENGHWKRNCPEYLVKKR----------------------------------------AEKESKD--------EK
K AA KG+ K+A K KCFHCN +GHWKRNCP+YL KK+ A KE++D K
Subjt: VKVKAPAAT-KGEEKIA-KEKCFHCNENGHWKRNCPEYLVKKR----------------------------------------AEKESKD--------EK
Query: VVVSINATFLEEDHIQDHKPCSKLVLEEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEMREPRRSGRVLRQPDRYMSLIETKVTIPDD
V VS NATFL+E+H+ DHKP SKLVL + A D+ST+VV++ GPS+RVD +T G SHP Q +R PRRSGR++ QP+RY+ L ET+V IPDD
Subjt: VVVSINATFLEEDHIQDHKPCSKLVLEEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEMREPRRSGRVLRQPDRYMSLIETKVTIPDD
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| TYJ98102.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-42 | 35.5 | Show/hide |
Query: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEIS--------SDAEANVATTSKRKFHKGSSSGSKSGPSYQKKG
MDSL+ FGQP S+ + IKY+Y RMK+G+SV+EHVL+MM+HFN+AEVNG V++E + + EANVATT KRKF + S S SK+GPS +
Subjt: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEIS--------SDAEANVATTSKRKFHKGSSSGSKSGPSYQKKG
Query: IQKKKKDNVKVKAPAATKGEEKIAKEKCFHCNENGHWKRNCPEYLVKKRAEKES----------------------------------------------
I+KKKK K P ++ K KC+H ENGHW RNCP++L K A+KE+
Subjt: IQKKKKDNVKVKAPAATKGEEKIAKEKCFHCNENGHWKRNCPEYLVKKRAEKES----------------------------------------------
Query: ----------------------------------------------------------------------KDEKVVVSINATFLEEDHIQDHKPCSKLVL
++ KV VS NATFLEE+HI++H+ SKLVL
Subjt: ----------------------------------------------------------------------KDEKVVVSINATFLEEDHIQDHKPCSKLVL
Query: EEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEMREPRRSGRVLRQPDRYMSLIETKVTIPDD
EEISK+ TD+ + ST++ ++ G +HP Q+ REPRRSGRV+RQPDRY+ L E ++ IPDD
Subjt: EEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEMREPRRSGRVLRQPDRYMSLIETKVTIPDD
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U676 Gag/pol protein | 3.8e-41 | 33.64 | Show/hide |
Query: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEIS-----------------------------------------
MDSL+ FGQ S I HDA+ Y+YN RM EG+SV+EHVLNMMVHFNVAE+NGAV++E S
Subjt: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEIS-----------------------------------------
Query: ------SDAEANVATTSKRKFHKGSSSGSKSGPSYQKKGIQKKKKDNVKVKA---PAATKGEEKIAKEKCFHCNENGHWKRNCPEYLVKKRAEKES----
EANVA TS RKFH+G + G+KS PS KKKK KA A T + K AK CFHCN+ GHWKRNCP+YL +K+ K+
Subjt: ------SDAEANVATTSKRKFHKGSSSGSKSGPSYQKKGIQKKKKDNVKVKA---PAATKGEEKIAKEKCFHCNENGHWKRNCPEYLVKKRAEKES----
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------------------------------KDEKVVVSINATFLEEDHIQDHKPCSKLVLEEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEM
KD KV VS NATFLEEDHI++HKPCSK+VL ++SK+ T+ STRVV++ TRV + S+ +H PQ +
Subjt: ------------------------------KDEKVVVSINATFLEEDHIQDHKPCSKLVLEEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEM
Query: REPRRSGRVLRQPDRYMSLIETKVTIPD
REPRRSGRV P RYMSL ET I D
Subjt: REPRRSGRVLRQPDRYMSLIETKVTIPD
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| A0A5A7UL81 Gag/pol protein | 2.0e-42 | 35.62 | Show/hide |
Query: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEIS--------SDAEANVATTSKRKFHKGSSSGSKSGPSYQKKG
MD+L+A FGQP S+ H+AIKY+ RMKEG+SV+EHVL+MM+H N+AEVNG V++E + EANV TT KRKF +GSSS +K GPS K
Subjt: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEIS--------SDAEANVATTSKRKFHKGSSSGSKSGPSYQKKG
Query: IQKKKKDNVKVKAPAATKGEEKIAKEKCFHCNENGHWKRNCPEYLVKKRAEKES----------------------------------------------
I+KK+K + P KG++ K KC+HC++ GHW RNCP+YL KK+AEKE
Subjt: IQKKKKDNVKVKAPAATKGEEKIAKEKCFHCNENGHWKRNCPEYLVKKRAEKES----------------------------------------------
Query: ------------------------------------------------------------------------------KDEKVVVSINATFLEEDHIQDH
++ KV VS NAT L+EDHI++H
Subjt: ------------------------------------------------------------------------------KDEKVVVSINATFLEEDHIQDH
Query: KPCSKLVLEEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEMREPRRSGRVLRQPDRYM
+P SKLVL EISK A DK + ST+V ++ G +HP QE+REPRRSGRV+ QPDRY+
Subjt: KPCSKLVLEEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEMREPRRSGRVLRQPDRYM
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| A0A5D3BEB1 Gag/pol protein | 5.4e-43 | 35.5 | Show/hide |
Query: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEIS--------SDAEANVATTSKRKFHKGSSSGSKSGPSYQKKG
MDSL+ FGQP S+ + IKY+Y RMK+G+SV+EHVL+MM+HFN+AEVNG V++E + + EANVATT KRKF + S S SK+GPS +
Subjt: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEIS--------SDAEANVATTSKRKFHKGSSSGSKSGPSYQKKG
Query: IQKKKKDNVKVKAPAATKGEEKIAKEKCFHCNENGHWKRNCPEYLVKKRAEKES----------------------------------------------
I+KKKK K P ++ K KC+H ENGHW RNCP++L K A+KE+
Subjt: IQKKKKDNVKVKAPAATKGEEKIAKEKCFHCNENGHWKRNCPEYLVKKRAEKES----------------------------------------------
Query: ----------------------------------------------------------------------KDEKVVVSINATFLEEDHIQDHKPCSKLVL
++ KV VS NATFLEE+HI++H+ SKLVL
Subjt: ----------------------------------------------------------------------KDEKVVVSINATFLEEDHIQDHKPCSKLVL
Query: EEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEMREPRRSGRVLRQPDRYMSLIETKVTIPDD
EEISK+ TD+ + ST++ ++ G +HP Q+ REPRRSGRV+RQPDRY+ L E ++ IPDD
Subjt: EEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEMREPRRSGRVLRQPDRYMSLIETKVTIPDD
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| A0A5D3BR24 Gag/pol protein | 1.3e-41 | 43.73 | Show/hide |
Query: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEISSDAEANVATTSKRKFHKGSSSGSKSGPSYQKKGIQKKKKDN
MD LR FGQ S I +AIKYVYN MKE +V+EHVL+M+V+FN + EAN A R+F SS GSK IQ +K
Subjt: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEISSDAEANVATTSKRKFHKGSSSGSKSGPSYQKKGIQKKKKDN
Query: VKVKAPAAT-KGEEKIA-KEKCFHCNENGHWKRNCPEYLVKKR----------------------------------------AEKESKD--------EK
K AA KG+ K+A K KCFHCN +GHWKRNCP+YL KK+ A KE++D K
Subjt: VKVKAPAAT-KGEEKIA-KEKCFHCNENGHWKRNCPEYLVKKR----------------------------------------AEKESKD--------EK
Query: VVVSINATFLEEDHIQDHKPCSKLVLEEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEMREPRRSGRVLRQPDRYMSLIETKVTIPDD
V VS NATFL+E+H+ DHKP SKLVL + A D+ST+VV++ GPS+RVD +T G SHP Q +R PRRSGR++ QP+RY+ L ET+V IPDD
Subjt: VVVSINATFLEEDHIQDHKPCSKLVLEEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEMREPRRSGRVLRQPDRYMSLIETKVTIPDD
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| A0A5D3CYG9 Retrovirus-related pol polyprotein from transposon tnt 1-94 | 7.5e-53 | 44.12 | Show/hide |
Query: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEIS-----------------------------------------
MDSL+ FGQP S+ H+AIKY+Y RMKEG+SV+EHVL++M+HF++AEVNG ++E +
Subjt: MDSLRARFGQPSTSIMHDAIKYVYNCRMKEGSSVKEHVLNMMVHFNVAEVNGAVMNEIS-----------------------------------------
Query: ------SDAEANVATTSKRKFHKGSSSGSKSGPSYQKKGIQKKKKDNVKVKAPAATKGEEKIAKEKCFHCNENGHWKRNCPEYLVKKRAEKESK------
+ EANV TT+K KF +GSSS SKSGPS + I+KK K K P KG++ K KC+HC ENGH RNCP+YL +K+ K+ K
Subjt: ------SDAEANVATTSKRKFHKGSSSGSKSGPSYQKKGIQKKKKDNVKVKAPAATKGEEKIAKEKCFHCNENGHWKRNCPEYLVKKRAEKESK------
Query: --------DEKVVVSINATFLEEDHIQDHKPCSKLVLEEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEMREPRRSGRVLRQPDRYMSLIETK
+ KV VS NA FLEEDHI++H+ SKLVLEEISK+ATD+ + ST+V ++ G +HP QE+ EPRRSGRV+RQPDRY+ L E +
Subjt: --------DEKVVVSINATFLEEDHIQDHKPCSKLVLEEISKDATDKSTRVVDQAGPSTRVDNRPSTCGPSHPPQEMREPRRSGRVLRQPDRYMSLIETK
Query: VTIPDD
+ IPDD
Subjt: VTIPDD
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