; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g16290 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g16290
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:10784027..10787345
RNA-Seq ExpressionMoc03g16290
SyntenyMoc03g16290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158520.1 uncharacterized protein LOC111024991 [Momordica charantia]2.8e-2449.03Show/hide
Query:  VRALQHQVRVQERDIGEDVSVDSPIPRDPIRGKAPMQSGEDSTRNLRSRVLVRERLNLGSRRTATLDPRDGICVHVTTEVPDLRQTMSGQNRGRQTGQQT
        V A    +R++E D+ E  + +S +PRDP  GKAP  S E+   ++  +V VRE LNL +R+TAT+DPR+G+ VH+TTE PDLRQ +  +N  +Q GQQT
Subjt:  VRALQHQVRVQERDIGEDVSVDSPIPRDPIRGKAPMQSGEDSTRNLRSRVLVRERLNLGSRRTATLDPRDGICVHVTTEVPDLRQTMSGQNRGRQTGQQT

Query:  PLTPNLGSTPTTTRVQSNVREQGQTTTQAITSTHQETIDVLEVPNPMELEVISKL
        P+T NLGSTP T  V SN  +Q      A TST+  T+DV EV + M+ EVI KL
Subjt:  PLTPNLGSTPTTTRVQSNVREQGQTTTQAITSTHQETIDVLEVPNPMELEVISKL
TrEMBL top hitse value%identityAlignment
A0A6J1DW30 Ribonuclease H1.4e-2449.03Show/hide
Query:  VRALQHQVRVQERDIGEDVSVDSPIPRDPIRGKAPMQSGEDSTRNLRSRVLVRERLNLGSRRTATLDPRDGICVHVTTEVPDLRQTMSGQNRGRQTGQQT
        V A    +R++E D+ E  + +S +PRDP  GKAP  S E+   ++  +V VRE LNL +R+TAT+DPR+G+ VH+TTE PDLRQ +  +N  +Q GQQT
Subjt:  VRALQHQVRVQERDIGEDVSVDSPIPRDPIRGKAPMQSGEDSTRNLRSRVLVRERLNLGSRRTATLDPRDGICVHVTTEVPDLRQTMSGQNRGRQTGQQT

Query:  PLTPNLGSTPTTTRVQSNVREQGQTTTQAITSTHQETIDVLEVPNPMELEVISKL
        P+T NLGSTP T  V SN  +Q      A TST+  T+DV EV + M+ EVI KL
Subjt:  PLTPNLGSTPTTTRVQSNVREQGQTTTQAITSTHQETIDVLEVPNPMELEVISKL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACTGCTTCGTCTGACTGTCGATGCTACTATCTCTACTCTTTCGACATTGGTCAGAGCACTTCAACATCAAGTAAGGGTCCAAGAGAGAGATATAGGTGAA
GATGTGTCTGTAGATTCACCGATTCCACGAGATCCAATACGAGGAAAGGCACCGATGCAATCAGGAGAAGATAGTACAAGGAATTTACGATCGCGAGTCCTAGTG
CGTGAACGACTAAATTTAGGATCCCGAAGGACTGCAACCCTTGATCCTCGGGATGGCATTTGTGTCCATGTCACCACAGAGGTACCAGATTTGCGACAAACCATG
TCAGGACAGAATAGAGGTCGACAAACAGGGCAACAGACCCCTCTGACACCGAACCTAGGATCAACTCCTACAACGACAAGAGTACAGTCGAATGTCCGTGAACAA
GGGCAAACGACCACACAAGCGATTACGTCTACCCACCAAGAAACAATAGACGTACTTGAGGTCCCAAACCCAATGGAGCTGGAAGTGATAAGCAAACTTCAGAAT
GATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCACTGCTTCGTCTGACTGTCGATGCTACTATCTCTACTCTTTCGACATTGGTCAGAGCACTTCAACATCAAGTAAGGGTCCAAGAGAGAGATATAGGTGAA
GATGTGTCTGTAGATTCACCGATTCCACGAGATCCAATACGAGGAAAGGCACCGATGCAATCAGGAGAAGATAGTACAAGGAATTTACGATCGCGAGTCCTAGTG
CGTGAACGACTAAATTTAGGATCCCGAAGGACTGCAACCCTTGATCCTCGGGATGGCATTTGTGTCCATGTCACCACAGAGGTACCAGATTTGCGACAAACCATG
TCAGGACAGAATAGAGGTCGACAAACAGGGCAACAGACCCCTCTGACACCGAACCTAGGATCAACTCCTACAACGACAAGAGTACAGTCGAATGTCCGTGAACAA
GGGCAAACGACCACACAAGCGATTACGTCTACCCACCAAGAAACAATAGACGTACTTGAGGTCCCAAACCCAATGGAGCTGGAAGTGATAAGCAAACTTCAGAAT
GATTTTTAA
Protein sequenceShow/hide protein sequence
MPLLRLTVDATISTLSTLVRALQHQVRVQERDIGEDVSVDSPIPRDPIRGKAPMQSGEDSTRNLRSRVLVRERLNLGSRRTATLDPRDGICVHVTTEVPDLRQTM
SGQNRGRQTGQQTPLTPNLGSTPTTTRVQSNVREQGQTTTQAITSTHQETIDVLEVPNPMELEVISKLQNDF