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Moc03g16320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g16320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr3:10804093..10809369
RNA-Seq ExpressionMoc03g16320
SyntenyMoc03g16320
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151295.1 uncharacterized protein LOC111019259 [Momordica charantia]6.6e-0578.38Show/hide
Query:  WINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
        WI  NDKA+VYIL SIS+VLAKK+ENMVT KEIMD L
Subjt:  WINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]3.9e-0565.96Show/hide
Query:  SVWVEVSKLIWINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
        +V V ++   WI  NDKAKVYILASISDVLAKK+E+ +T KEIMD L
Subjt:  SVWVEVSKLIWINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
XP_022155999.1 uncharacterized protein LOC111022974 [Momordica charantia]2.3e-0581.08Show/hide
Query:  WINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
        WI  NDKAKVYILASISDVLAKK+ENMV  +EIMD L
Subjt:  WINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]3.9e-0581.08Show/hide
Query:  WINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
        WI  NDKAKVYILASISDVLAKK+E+ VT KEIMD L
Subjt:  WINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
XP_038887277.1 uncharacterized protein LOC120077468 [Benincasa hispida]6.6e-0572.97Show/hide
Query:  WINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
        WI  NDKA++YILASISD+LAK YE+MV+ K+IMDLL
Subjt:  WINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
TrEMBL top hitse value%identityAlignment
A0A6J1DAT1 uncharacterized protein LOC1110192593.2e-0578.38Show/hide
Query:  WINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
        WI  NDKA+VYIL SIS+VLAKK+ENMVT KEIMD L
Subjt:  WINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
A0A6J1DFZ2 uncharacterized protein LOC1110200951.9e-0565.96Show/hide
Query:  SVWVEVSKLIWINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
        +V V ++   WI  NDKAKVYILASISDVLAKK+E+ +T KEIMD L
Subjt:  SVWVEVSKLIWINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
A0A6J1DRZ2 uncharacterized protein LOC1110229741.1e-0581.08Show/hide
Query:  WINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
        WI  NDKAKVYILASISDVLAKK+ENMV  +EIMD L
Subjt:  WINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
A0A6J1DUI4 uncharacterized protein LOC1110245734.2e-0575Show/hide
Query:  WINPNDKAKVYILASISDVLAKKYENMVTIKEIMDL
        WI  NDK KVY LASISDVL KK+E+MVT++EIMDL
Subjt:  WINPNDKAKVYILASISDVLAKKYENMVTIKEIMDL
A0A6J1DWL0 uncharacterized protein LOC1110247341.9e-0581.08Show/hide
Query:  WINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
        WI  NDKAKVYILASISDVLAKK+E+ VT KEIMD L
Subjt:  WINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTGATTGGGCGGCAAGGCAAGGGGGCTGATGGCATGCGCAGAGGCATGGCTGGCGTTGGTGGGCACGTGCATGGGCGGCAGAAAGGGGCGTTGGGCACT
GGCGCTAGCATTGAGAGGCGTGCGGAGAGCGTGAGTGTGGGTGTGGGAATGGGCGCTGATGGCGTGCGGGGCGCGCATGCGCTTGGACCGAGGCGCGCAGACAGG
GCCACGCGGGTGCTTGGGGTAGGCGTGGGCATGTGCGGCAGACAGGCATATGGGTGTTGGGCAGGCGCGGACGTGCAAGCATGGGCGGCAGGCGATGGAGTGCAG
GCGTGGCCGGCAGACGATGGCATGCAGGCGTGGGCGGTAGGCGATGGGCACTTAGGTAATCTTCTAATATTTTGTTCTGTCTGGGTTGAGGTATCTAAGCTGATC
TGGATCAATCCCAATGACAAGGCCAAGGTCTACATCTTGGCGAGCATATCTGATGTGCTTGCTAAGAAGTACGAGAACATGGTCACCATTAAGGAGATCATGGAC
TTGCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATTGATTGGGCGGCAAGGCAAGGGGGCTGATGGCATGCGCAGAGGCATGGCTGGCGTTGGTGGGCACGTGCATGGGCGGCAGAAAGGGGCGTTGGGCACT
GGCGCTAGCATTGAGAGGCGTGCGGAGAGCGTGAGTGTGGGTGTGGGAATGGGCGCTGATGGCGTGCGGGGCGCGCATGCGCTTGGACCGAGGCGCGCAGACAGG
GCCACGCGGGTGCTTGGGGTAGGCGTGGGCATGTGCGGCAGACAGGCATATGGGTGTTGGGCAGGCGCGGACGTGCAAGCATGGGCGGCAGGCGATGGAGTGCAG
GCGTGGCCGGCAGACGATGGCATGCAGGCGTGGGCGGTAGGCGATGGGCACTTAGGTAATCTTCTAATATTTTGTTCTGTCTGGGTTGAGGTATCTAAGCTGATC
TGGATCAATCCCAATGACAAGGCCAAGGTCTACATCTTGGCGAGCATATCTGATGTGCTTGCTAAGAAGTACGAGAACATGGTCACCATTAAGGAGATCATGGAC
TTGCTGTAG
Protein sequenceShow/hide protein sequence
MELIGRQGKGADGMRRGMAGVGGHVHGRQKGALGTGASIERRAESVSVGVGMGADGVRGAHALGPRRADRATRVLGVGVGMCGRQAYGCWAGADVQAWAAGDGVQ
AWPADDGMQAWAVGDGHLGNLLIFCSVWVEVSKLIWINPNDKAKVYILASISDVLAKKYENMVTIKEIMDLL