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Moc03g16370 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g16370
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr3:10839788..10840297
RNA-Seq ExpressionMoc03g16370
SyntenyMoc03g16370
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsIPR000953 - Chromo/chromo shadow domain
IPR016197 - Chromo-like domain superfamily
IPR023780 - Chromo domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]4.6e-4860.36Show/hide
Query:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN
        MKKWADKKRRPLEF AG QVLIKLR EQ+R  G KDQRLV KYEG + +++KVG  SYRV LP+W+KI+PVIHV NLK YH D  D  RN V RPT+ L+
Subjt:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN

Query:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI
         K +K VEEILA+R     RP R + ++LVKW  LP +E SWE  EDL+    +I +F+ R+LTG STI
Subjt:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI

KAA0067362.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-4860.95Show/hide
Query:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN
        MKKWADKKRRPLEF AG QVLIKLR EQ+RL G KDQRLV KYEG + +++KVG  SYRV LP+W+KI+PVIHV NLKSYH D  D  +N V RP + LN
Subjt:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN

Query:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI
         K +K+VEEILA+R     RP R + ++LVKW  LP +E SWE  EDL+    +I +F+ R+LTG STI
Subjt:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]4.6e-4860.36Show/hide
Query:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN
        MKKWADKKRRPLEF AG QVLIKLR EQ+R  G KDQRLV KYEG + +++KVG  SYRV LP+W+KI+PVIHV NLK YH D  D  RN V RPT+ L+
Subjt:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN

Query:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI
         K +K VEEILA+R     RP R + ++LVKW  LP +E SWE  EDL+    +I +F+ R+LTG STI
Subjt:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI

TYK19637.1 reverse transcriptase [Cucumis melo var. makuwa]4.6e-4860.36Show/hide
Query:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN
        MKKWADKKRRPLEF AG QVLIKLR EQ+R  G KDQRLV KYEG + +++KVG  SYRV LP+W+KI+PVIHV NLK YH D  D  RN V RPT+ L+
Subjt:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN

Query:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI
         K +K VEEILA+R     RP R + ++LVKW  LP +E SWE  EDL+    +I +F+ R+LTG STI
Subjt:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI

XP_038882325.1 uncharacterized protein LOC120073574 [Benincasa hispida]1.2e-4863.75Show/hide
Query:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN
        MKKWADKK R LEF+AG +VLIKLR EQ R  G KDQRLV KYEG + +I+KVG+ SYRVQLPSW+KIHPVIHV  LK YHPD  D  RN + RP V + 
Subjt:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN

Query:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQ
        +  EK+V +IL KRT  +GRPRR++ +FLVKW  LPD+EISWE A+D K A+  IA FEQ
Subjt:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQ

TrEMBL top hitse value%identityAlignment
A0A5A7T0E2 Reverse transcriptase2.2e-4860.36Show/hide
Query:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN
        MKKWADKKRRPLEF AG QVLIKLR EQ+R  G KDQRLV KYEG + +++KVG  SYRV LP+W+KI+PVIHV NLK YH D  D  RN V RPT+ L+
Subjt:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN

Query:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI
         K +K VEEILA+R     RP R + ++LVKW  LP +E SWE  EDL+    +I +F+ R+LTG STI
Subjt:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI

A0A5A7UXR6 Reverse transcriptase2.2e-4860.36Show/hide
Query:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN
        MKKWADKKRRPLEF AG QVLIKLR EQ+R  G KDQRLV KYEG + +++KVG  SYRV LP+W+KI+PVIHV NLK YH D  D  RN V RPT+ L+
Subjt:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN

Query:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI
         K +K VEEILA+R     RP R + ++LVKW  LP +E SWE  EDL+    +I +F+ R+LTG STI
Subjt:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI

A0A5A7VG74 Reverse transcriptase5.9e-4960.95Show/hide
Query:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN
        MKKWADKKRRPLEF AG QVLIKLR EQ+RL G KDQRLV KYEG + +++KVG  SYRV LP+W+KI+PVIHV NLKSYH D  D  +N V RP + LN
Subjt:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN

Query:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI
         K +K+VEEILA+R     RP R + ++LVKW  LP +E SWE  EDL+    +I +F+ R+LTG STI
Subjt:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI

A0A5D3C4R1 Reverse transcriptase2.2e-4860.36Show/hide
Query:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN
        MKKWADKKRRPLEF AG QVLIKLR EQ+R  G KDQRLV KYEG + +++KVG  SYRV LP+W+KI+PVIHV NLK YH D  D  RN V RPT+ L+
Subjt:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN

Query:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI
         K +K VEEILA+R     RP R + ++LVKW  LP +E SWE  EDL+    +I +F+ R+LTG STI
Subjt:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI

A0A5D3DBE0 Reverse transcriptase2.2e-4860.36Show/hide
Query:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN
        MKKWADKKRRPLEF AG QVLIKLR EQ+R  G KDQRLV KYEG + +++KVG  SYRV LP+W+KI+PVIHV NLK YH D  D  RN V RPT+ L+
Subjt:  MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALN

Query:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI
         K +K VEEILA+R     RP R + ++LVKW  LP +E SWE  EDL+    +I +F+ R+LTG STI
Subjt:  NKTEKKVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGTGGGCCGACAAGAAGCGCAGACCGTTAGAATTCGAAGCAGGACATCAAGTGCTCATTAAATTACGTCTGGAACAGCTCCGATTGTGGGGTAACAAA
GACCAACGCCTTGTGTGGAAGTACGAAGGGAAAATCAACATTATCCAGAAGGTCGGGAAGAGGTCATACAGGGTCCAATTACCCTCATGGATAAAGATACACCCA
GTGATTCATGTTAGAAATCTAAAATCCTATCACCCAGACAACATTGATCCCACACGCAACGAAGTGATTCGACCAACGGTCGCCTTGAACAACAAGACTGAAAAA
AAAGTTGAAGAAATCCTAGCTAAAAGAACTTGTCTAGTCGGACGACCAAGAAGGGACGTACAAAAATTCTTAGTCAAGTGGACAGGGCTTCCAGATAAAGAAATC
AGTTGGGAGCATGCAGAAGATTTGAAATTAGCATCAGCCCAGATCGCAGAATTCGAGCAACGTCGGTTGACAGGGAGATCAACCATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGTGGGCCGACAAGAAGCGCAGACCGTTAGAATTCGAAGCAGGACATCAAGTGCTCATTAAATTACGTCTGGAACAGCTCCGATTGTGGGGTAACAAA
GACCAACGCCTTGTGTGGAAGTACGAAGGGAAAATCAACATTATCCAGAAGGTCGGGAAGAGGTCATACAGGGTCCAATTACCCTCATGGATAAAGATACACCCA
GTGATTCATGTTAGAAATCTAAAATCCTATCACCCAGACAACATTGATCCCACACGCAACGAAGTGATTCGACCAACGGTCGCCTTGAACAACAAGACTGAAAAA
AAAGTTGAAGAAATCCTAGCTAAAAGAACTTGTCTAGTCGGACGACCAAGAAGGGACGTACAAAAATTCTTAGTCAAGTGGACAGGGCTTCCAGATAAAGAAATC
AGTTGGGAGCATGCAGAAGATTTGAAATTAGCATCAGCCCAGATCGCAGAATTCGAGCAACGTCGGTTGACAGGGAGATCAACCATTTAA
Protein sequenceShow/hide protein sequence
MKKWADKKRRPLEFEAGHQVLIKLRLEQLRLWGNKDQRLVWKYEGKINIIQKVGKRSYRVQLPSWIKIHPVIHVRNLKSYHPDNIDPTRNEVIRPTVALNNKTEK
KVEEILAKRTCLVGRPRRDVQKFLVKWTGLPDKEISWEHAEDLKLASAQIAEFEQRRLTGRSTI