; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g16480 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g16480
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotransposon gag protein
Genome locationchr3:10916002..10917279
RNA-Seq ExpressionMoc03g16480
SyntenyMoc03g16480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.4e-7379.38Show/hide
Query:  PRNGKGTTQSETEESTNSAGSKLWIGLDKGKPTDQPESSEKRQNQKEKGFDLEELLDQADSPFTEEIMKEKRMTESLHYYVARFNEEKLQVEGLTDAVSL
        P  GK   +  + E          I LDKGKP D+PESSEKR NQK+KGFDLEELLDQADSPFTEEIM+EKR TESLH YV RFN+EKLQVEGLTDAVSL
Subjt:  PRNGKGTTQSETEESTNSAGSKLWIGLDKGKPTDQPESSEKRQNQKEKGFDLEELLDQADSPFTEEIMKEKRMTESLHYYVARFNEEKLQVEGLTDAVSL

Query:  LAFMSGVRDEHLSFSFGKKTSSTFSEALSRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWEKRDRSSQNDPPQNFEKYTPTTVPLE
        LAF+ GVRDEHLSFSFGK+T STFSEALSRAQRYMSAGEFFYSKRE +GKRTDQKRERSGDKPQGSRWEKRDRS Q DPPQ FEKYT TTVPLE
Subjt:  LAFMSGVRDEHLSFSFGKKTSSTFSEALSRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWEKRDRSSQNDPPQNFEKYTPTTVPLE

XP_022145129.1 uncharacterized protein LOC111014646 [Momordica charantia]7.1e-6571.36Show/hide
Query:  MTPERSPRRSDDNCSAKRRLNLDDPQVEGSEDGTSQSNPERQEGLPEAHAITTPVPLQKQFEVLENKVEGMLQCMTQVLRQFEQQEPDEVPLVRDPRNGK
        MTPERSPRRSDDNCSAKRRLNLDDPQV G EDGTSQ N ERQEGLPEAHA+TTP PLQKQF VLE+KVEGMLQ MTQVLRQ+E+QE DEVPLVRDPR GK
Subjt:  MTPERSPRRSDDNCSAKRRLNLDDPQVEGSEDGTSQSNPERQEGLPEAHAITTPVPLQKQFEVLENKVEGMLQCMTQVLRQFEQQEPDEVPLVRDPRNGK

Query:  GTTQSETEESTNSAGSKLWIG----------------------------------------LDKGKPTDQPESSEKRQNQKEKGFDLEELLDQADSPFTE
        G  QSETEESTNSAGSKL IG                                        LDKGKP DQPESSEKR NQKEKGFDLEELLDQADSPFTE
Subjt:  GTTQSETEESTNSAGSKLWIG----------------------------------------LDKGKPTDQPESSEKRQNQKEKGFDLEELLDQADSPFTE

Query:  EIMKEK
        EIM+EK
Subjt:  EIMKEK

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.8e-9854.59Show/hide
Query:  MTPERSPRRSDDNCSAKRRLNLDDPQVEGSEDGTSQSNPERQEGLPEAHAITTPVPLQKQFEVLENKVEGMLQCMTQVLRQFEQQEPDEVPLVRDPRNGK
        MTPERSPRRSDD+CSAKRRLNL DPQV G EDGTSQ N ERQEGL E  A+TTP P QKQF VLE+K                  E DEVPLVRDP+ GK
Subjt:  MTPERSPRRSDDNCSAKRRLNLDDPQVEGSEDGTSQSNPERQEGLPEAHAITTPVPLQKQFEVLENKVEGMLQCMTQVLRQFEQQEPDEVPLVRDPRNGK

Query:  GTTQSETEESTNSAGSKLWIG----------------------------------------LDKGKPTDQPESSEKRQNQKEKGFDLEELLDQADSPFTE
        G T+S+TEESTNS GSKL IG                                        LDKGKP D+PESSEKR + KEKGFDLEELLDQADSPFTE
Subjt:  GTTQSETEESTNSAGSKLWIG----------------------------------------LDKGKPTDQPESSEKRQNQKEKGFDLEELLDQADSPFTE

Query:  EIMKEK----------------------------------------------------------------------------------------------
        EIM+EK                                                                                              
Subjt:  EIMKEK----------------------------------------------------------------------------------------------

Query:  --RMTESLHYYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTSSTFSEALSRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWE
          R TESL  YVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGK+T +TFSEALSRAQRYMSAGEFFYSKREPDGKRTD KRERSGDKPQGSRWE
Subjt:  --RMTESLHYYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTSSTFSEALSRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWE

Query:  KRDRSSQNDPPQNFEKYTPTTVPLE
        KRDRSSQ DPP+ FEKYTPTTVP+E
Subjt:  KRDRSSQNDPPQNFEKYTPTTVPLE

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]3.3e-5454.51Show/hide
Query:  IGLDKGKPTDQPESSEKRQNQKEKGFDLEELLDQADSPFTEEIMKEK-----------------------------------------------------
        I L+KGKP D+PESSEKR NQKEKGFDLEELL QADSPFTEEIM+EK                                                     
Subjt:  IGLDKGKPTDQPESSEKRQNQKEKGFDLEELLDQADSPFTEEIMKEK-----------------------------------------------------

Query:  -------------------------------------------RMTESLHYYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTSSTFSEAL
                                                   R  ESLH YVARFNEEKLQ+EGLTDAVSLLAFMSGVRDEHLSFSF K+T STFSEAL
Subjt:  -------------------------------------------RMTESLHYYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTSSTFSEAL

Query:  SRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWEKRDRSSQNDPPQNF
        SRAQRYMSA EF YSKREPDGKRTDQKRERSGDKPQGSRWEKRDR SQ DPP+ F
Subjt:  SRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWEKRDRSSQNDPPQNF

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]4.8e-5389.6Show/hide
Query:  EKRMTESLHYYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTSSTFSEALSRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWE
        ++R TESLH YVARFN+EKLQ+E LTD VSLLAFMSGVRDEHLSFSFGKKT STFSE LSRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWE
Subjt:  EKRMTESLHYYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTSSTFSEALSRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWE

Query:  KRDRSSQNDPPQNFEKYTPTTVPLE
        KRDRSSQ DPP+ FEKYTPTTVPLE
Subjt:  KRDRSSQNDPPQNFEKYTPTTVPLE

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128051.2e-7379.38Show/hide
Query:  PRNGKGTTQSETEESTNSAGSKLWIGLDKGKPTDQPESSEKRQNQKEKGFDLEELLDQADSPFTEEIMKEKRMTESLHYYVARFNEEKLQVEGLTDAVSL
        P  GK   +  + E          I LDKGKP D+PESSEKR NQK+KGFDLEELLDQADSPFTEEIM+EKR TESLH YV RFN+EKLQVEGLTDAVSL
Subjt:  PRNGKGTTQSETEESTNSAGSKLWIGLDKGKPTDQPESSEKRQNQKEKGFDLEELLDQADSPFTEEIMKEKRMTESLHYYVARFNEEKLQVEGLTDAVSL

Query:  LAFMSGVRDEHLSFSFGKKTSSTFSEALSRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWEKRDRSSQNDPPQNFEKYTPTTVPLE
        LAF+ GVRDEHLSFSFGK+T STFSEALSRAQRYMSAGEFFYSKRE +GKRTDQKRERSGDKPQGSRWEKRDRS Q DPPQ FEKYT TTVPLE
Subjt:  LAFMSGVRDEHLSFSFGKKTSSTFSEALSRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWEKRDRSSQNDPPQNFEKYTPTTVPLE

A0A6J1CUA7 uncharacterized protein LOC1110146463.4e-6571.36Show/hide
Query:  MTPERSPRRSDDNCSAKRRLNLDDPQVEGSEDGTSQSNPERQEGLPEAHAITTPVPLQKQFEVLENKVEGMLQCMTQVLRQFEQQEPDEVPLVRDPRNGK
        MTPERSPRRSDDNCSAKRRLNLDDPQV G EDGTSQ N ERQEGLPEAHA+TTP PLQKQF VLE+KVEGMLQ MTQVLRQ+E+QE DEVPLVRDPR GK
Subjt:  MTPERSPRRSDDNCSAKRRLNLDDPQVEGSEDGTSQSNPERQEGLPEAHAITTPVPLQKQFEVLENKVEGMLQCMTQVLRQFEQQEPDEVPLVRDPRNGK

Query:  GTTQSETEESTNSAGSKLWIG----------------------------------------LDKGKPTDQPESSEKRQNQKEKGFDLEELLDQADSPFTE
        G  QSETEESTNSAGSKL IG                                        LDKGKP DQPESSEKR NQKEKGFDLEELLDQADSPFTE
Subjt:  GTTQSETEESTNSAGSKLWIG----------------------------------------LDKGKPTDQPESSEKRQNQKEKGFDLEELLDQADSPFTE

Query:  EIMKEK
        EIM+EK
Subjt:  EIMKEK

A0A6J1DWY0 uncharacterized protein LOC1110252931.4e-9854.59Show/hide
Query:  MTPERSPRRSDDNCSAKRRLNLDDPQVEGSEDGTSQSNPERQEGLPEAHAITTPVPLQKQFEVLENKVEGMLQCMTQVLRQFEQQEPDEVPLVRDPRNGK
        MTPERSPRRSDD+CSAKRRLNL DPQV G EDGTSQ N ERQEGL E  A+TTP P QKQF VLE+K                  E DEVPLVRDP+ GK
Subjt:  MTPERSPRRSDDNCSAKRRLNLDDPQVEGSEDGTSQSNPERQEGLPEAHAITTPVPLQKQFEVLENKVEGMLQCMTQVLRQFEQQEPDEVPLVRDPRNGK

Query:  GTTQSETEESTNSAGSKLWIG----------------------------------------LDKGKPTDQPESSEKRQNQKEKGFDLEELLDQADSPFTE
        G T+S+TEESTNS GSKL IG                                        LDKGKP D+PESSEKR + KEKGFDLEELLDQADSPFTE
Subjt:  GTTQSETEESTNSAGSKLWIG----------------------------------------LDKGKPTDQPESSEKRQNQKEKGFDLEELLDQADSPFTE

Query:  EIMKEK----------------------------------------------------------------------------------------------
        EIM+EK                                                                                              
Subjt:  EIMKEK----------------------------------------------------------------------------------------------

Query:  --RMTESLHYYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTSSTFSEALSRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWE
          R TESL  YVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGK+T +TFSEALSRAQRYMSAGEFFYSKREPDGKRTD KRERSGDKPQGSRWE
Subjt:  --RMTESLHYYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTSSTFSEALSRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWE

Query:  KRDRSSQNDPPQNFEKYTPTTVPLE
        KRDRSSQ DPP+ FEKYTPTTVP+E
Subjt:  KRDRSSQNDPPQNFEKYTPTTVPLE

A0A6J1DYL6 uncharacterized protein LOC1110257852.3e-5389.6Show/hide
Query:  EKRMTESLHYYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTSSTFSEALSRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWE
        ++R TESLH YVARFN+EKLQ+E LTD VSLLAFMSGVRDEHLSFSFGKKT STFSE LSRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWE
Subjt:  EKRMTESLHYYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTSSTFSEALSRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWE

Query:  KRDRSSQNDPPQNFEKYTPTTVPLE
        KRDRSSQ DPP+ FEKYTPTTVPLE
Subjt:  KRDRSSQNDPPQNFEKYTPTTVPLE

A0A6J1E1E7 uncharacterized protein LOC1110255481.6e-5454.51Show/hide
Query:  IGLDKGKPTDQPESSEKRQNQKEKGFDLEELLDQADSPFTEEIMKEK-----------------------------------------------------
        I L+KGKP D+PESSEKR NQKEKGFDLEELL QADSPFTEEIM+EK                                                     
Subjt:  IGLDKGKPTDQPESSEKRQNQKEKGFDLEELLDQADSPFTEEIMKEK-----------------------------------------------------

Query:  -------------------------------------------RMTESLHYYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTSSTFSEAL
                                                   R  ESLH YVARFNEEKLQ+EGLTDAVSLLAFMSGVRDEHLSFSF K+T STFSEAL
Subjt:  -------------------------------------------RMTESLHYYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKKTSSTFSEAL

Query:  SRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWEKRDRSSQNDPPQNF
        SRAQRYMSA EF YSKREPDGKRTDQKRERSGDKPQGSRWEKRDR SQ DPP+ F
Subjt:  SRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWEKRDRSSQNDPPQNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACCAGAAAGGAGTCCACGACGCTCTGATGATAACTGCTCTGCCAAGAGGAGGTTGAACTTGGACGACCCCCAGGTCGAAGGATCCGAGGATGGGACCAGC
CAGTCAAACCCGGAACGTCAGGAGGGGTTACCCGAGGCGCATGCAATAACGACCCCTGTGCCACTCCAAAAGCAGTTCGAGGTCTTGGAAAACAAGGTAGAGGGC
ATGTTGCAATGCATGACCCAAGTCCTTCGACAATTCGAGCAACAAGAGCCCGACGAGGTACCCCTTGTCAGAGACCCGAGAAATGGGAAGGGCACGACGCAAAGC
GAGACTGAGGAATCAACAAATAGTGCAGGGAGCAAGTTGTGGATAGGCCTCGATAAAGGCAAACCGACAGATCAGCCAGAGTCTTCAGAGAAGCGACAGAACCAA
AAGGAGAAGGGTTTCGACCTCGAAGAACTACTGGATCAAGCTGACTCACCATTCACAGAGGAGATCATGAAAGAGAAGAGGATGACAGAGAGTCTACACTATTAT
GTAGCTCGGTTCAACGAGGAAAAGCTGCAGGTAGAAGGCCTTACAGACGCTGTATCTCTACTGGCCTTCATGTCCGGCGTCAGGGATGAGCATTTGTCATTTTCG
TTCGGAAAGAAGACATCGAGTACCTTCTCGGAGGCGCTGAGCCGAGCTCAGAGGTACATGAGCGCTGGTGAGTTCTTTTACTCAAAAAGGGAGCCAGACGGAAAG
CGAACCGACCAAAAGAGGGAGAGGTCGGGAGATAAACCACAGGGGTCGAGATGGGAGAAGAGGGATCGGAGTAGCCAGAATGATCCACCCCAAAATTTTGAAAAG
TATACCCCGACCACCGTTCCACTCGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACACCAGAAAGGAGTCCACGACGCTCTGATGATAACTGCTCTGCCAAGAGGAGGTTGAACTTGGACGACCCCCAGGTCGAAGGATCCGAGGATGGGACCAGC
CAGTCAAACCCGGAACGTCAGGAGGGGTTACCCGAGGCGCATGCAATAACGACCCCTGTGCCACTCCAAAAGCAGTTCGAGGTCTTGGAAAACAAGGTAGAGGGC
ATGTTGCAATGCATGACCCAAGTCCTTCGACAATTCGAGCAACAAGAGCCCGACGAGGTACCCCTTGTCAGAGACCCGAGAAATGGGAAGGGCACGACGCAAAGC
GAGACTGAGGAATCAACAAATAGTGCAGGGAGCAAGTTGTGGATAGGCCTCGATAAAGGCAAACCGACAGATCAGCCAGAGTCTTCAGAGAAGCGACAGAACCAA
AAGGAGAAGGGTTTCGACCTCGAAGAACTACTGGATCAAGCTGACTCACCATTCACAGAGGAGATCATGAAAGAGAAGAGGATGACAGAGAGTCTACACTATTAT
GTAGCTCGGTTCAACGAGGAAAAGCTGCAGGTAGAAGGCCTTACAGACGCTGTATCTCTACTGGCCTTCATGTCCGGCGTCAGGGATGAGCATTTGTCATTTTCG
TTCGGAAAGAAGACATCGAGTACCTTCTCGGAGGCGCTGAGCCGAGCTCAGAGGTACATGAGCGCTGGTGAGTTCTTTTACTCAAAAAGGGAGCCAGACGGAAAG
CGAACCGACCAAAAGAGGGAGAGGTCGGGAGATAAACCACAGGGGTCGAGATGGGAGAAGAGGGATCGGAGTAGCCAGAATGATCCACCCCAAAATTTTGAAAAG
TATACCCCGACCACCGTTCCACTCGAGTAA
Protein sequenceShow/hide protein sequence
MTPERSPRRSDDNCSAKRRLNLDDPQVEGSEDGTSQSNPERQEGLPEAHAITTPVPLQKQFEVLENKVEGMLQCMTQVLRQFEQQEPDEVPLVRDPRNGKGTTQS
ETEESTNSAGSKLWIGLDKGKPTDQPESSEKRQNQKEKGFDLEELLDQADSPFTEEIMKEKRMTESLHYYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFS
FGKKTSSTFSEALSRAQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWEKRDRSSQNDPPQNFEKYTPTTVPLE