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Moc03g16540 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g16540
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein SPIRRIG
Genome locationchr3:10949213..10957422
RNA-Seq ExpressionMoc03g16540
SyntenyMoc03g16540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.5e-0453.62Show/hide
Query:  KSPLLRDPRKGKESCTKR-----DFNKEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTEEIMREK
        KSP    P  GK     R       +K K  ++PE SE++  QK+KGF+LEELLDQADSP TEEIMREK
Subjt:  KSPLLRDPRKGKESCTKR-----DFNKEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTEEIMREK

XP_022145129.1 uncharacterized protein LOC111014646 [Momordica charantia]3.2e-3646.79Show/hide
Query:  MTLEKSPQRSDDDCHPRRRLNMDDPQLGGVGDETNQLGVIEMLEIP---STTVPEQLKNKFAALEEKVEGMFQRMTQLLKRLEQQETDKSPLLRDPRKGK
        MT E+SP+RSDD+C  +RRLN+DDPQ+GG  D T+Q  +     +P   + T PE L+ +FA LE+KVEGM QRMTQ+L++ E+QE+D+ PL+RDPRKGK
Subjt:  MTLEKSPQRSDDDCHPRRRLNMDDPQLGGVGDETNQLGVIEMLEIP---STTVPEQLKNKFAALEEKVEGMFQRMTQLLKRLEQQETDKSPLLRDPRKGK

Query:  ---ESCTKRDFN---------------------------------------------------KEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTE
           +S T+   N                                                   K K  +QPE SE++  QKEKGF+LEELLDQADSP TE
Subjt:  ---ESCTKRDFN---------------------------------------------------KEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTE

Query:  EIMREKVPPKFKLPVVKQ
        EIMREKVPPKFKLP VKQ
Subjt:  EIMREKVPPKFKLPVVKQ

XP_022155816.1 protein SPIRRIG [Momordica charantia]6.6e-1351.43Show/hide
Query:  KVEGMFQRMTQLLKRLEQQETDKSPLLRDPRKGKESCTKR-----DFNKEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTEEIMREKVPPKFKLPV
        ++E   +R TQ      QQ+  K      P  GK +  K+     D +K+K  ++PE SERQ  +KEKGF+LEELLDQADSP  EEIM EKVPPKFKLP 
Subjt:  KVEGMFQRMTQLLKRLEQQETDKSPLLRDPRKGKESCTKR-----DFNKEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTEEIMREKVPPKFKLPV

Query:  VKQLD
        VKQ D
Subjt:  VKQLD

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.4e-3142.31Show/hide
Query:  MTLEKSPQRSDDDCHPRRRLNMDDPQLGGVGDET---NQLGVIEMLEIPSTTVPEQLKNKFAALEEKVEGMFQRMTQLLKRLEQQETDKSPLLRDPRKGK
        MT E+SP+RSDDDC  +RRLN+ DPQ+GG  D T   NQ     + E  + T PE  + +FA LE+K                  E+D+ PL+RDP+KGK
Subjt:  MTLEKSPQRSDDDCHPRRRLNMDDPQLGGVGDET---NQLGVIEMLEIPSTTVPEQLKNKFAALEEKVEGMFQRMTQLLKRLEQQETDKSPLLRDPRKGK

Query:  ---ESCTKRDFN---------------------------------------------------KEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTE
           ES T+   N                                                   K K  ++PE SE++   KEKGF+LEELLDQADSP TE
Subjt:  ---ESCTKRDFN---------------------------------------------------KEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTE

Query:  EIMREKVPPKFKLPVVKQLDESVDPVDHLDAYQE
        EIMREKVPPKFKLP VKQ D + DPVDHLDAY+E
Subjt:  EIMREKVPPKFKLPVVKQLDESVDPVDHLDAYQE

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]1.2e-1770.83Show/hide
Query:  NKEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTEEIMREKVPPKFKLPVVKQLDESVDPVDHLDAYQE
        NK K +++PE SE++  QKEKGF+LEELL QADSP TEEIMREKVPPKFKLP VK  D   +PVDHLDAY+E
Subjt:  NKEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTEEIMREKVPPKFKLPVVKQLDESVDPVDHLDAYQE

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128051.2e-0453.62Show/hide
Query:  KSPLLRDPRKGKESCTKR-----DFNKEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTEEIMREK
        KSP    P  GK     R       +K K  ++PE SE++  QK+KGF+LEELLDQADSP TEEIMREK
Subjt:  KSPLLRDPRKGKESCTKR-----DFNKEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTEEIMREK

A0A6J1CUA7 uncharacterized protein LOC1110146461.6e-3646.79Show/hide
Query:  MTLEKSPQRSDDDCHPRRRLNMDDPQLGGVGDETNQLGVIEMLEIP---STTVPEQLKNKFAALEEKVEGMFQRMTQLLKRLEQQETDKSPLLRDPRKGK
        MT E+SP+RSDD+C  +RRLN+DDPQ+GG  D T+Q  +     +P   + T PE L+ +FA LE+KVEGM QRMTQ+L++ E+QE+D+ PL+RDPRKGK
Subjt:  MTLEKSPQRSDDDCHPRRRLNMDDPQLGGVGDETNQLGVIEMLEIP---STTVPEQLKNKFAALEEKVEGMFQRMTQLLKRLEQQETDKSPLLRDPRKGK

Query:  ---ESCTKRDFN---------------------------------------------------KEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTE
           +S T+   N                                                   K K  +QPE SE++  QKEKGF+LEELLDQADSP TE
Subjt:  ---ESCTKRDFN---------------------------------------------------KEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTE

Query:  EIMREKVPPKFKLPVVKQ
        EIMREKVPPKFKLP VKQ
Subjt:  EIMREKVPPKFKLPVVKQ

A0A6J1DSV3 protein SPIRRIG3.2e-1351.43Show/hide
Query:  KVEGMFQRMTQLLKRLEQQETDKSPLLRDPRKGKESCTKR-----DFNKEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTEEIMREKVPPKFKLPV
        ++E   +R TQ      QQ+  K      P  GK +  K+     D +K+K  ++PE SERQ  +KEKGF+LEELLDQADSP  EEIM EKVPPKFKLP 
Subjt:  KVEGMFQRMTQLLKRLEQQETDKSPLLRDPRKGKESCTKR-----DFNKEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTEEIMREKVPPKFKLPV

Query:  VKQLD
        VKQ D
Subjt:  VKQLD

A0A6J1DWY0 uncharacterized protein LOC1110252936.8e-3242.31Show/hide
Query:  MTLEKSPQRSDDDCHPRRRLNMDDPQLGGVGDET---NQLGVIEMLEIPSTTVPEQLKNKFAALEEKVEGMFQRMTQLLKRLEQQETDKSPLLRDPRKGK
        MT E+SP+RSDDDC  +RRLN+ DPQ+GG  D T   NQ     + E  + T PE  + +FA LE+K                  E+D+ PL+RDP+KGK
Subjt:  MTLEKSPQRSDDDCHPRRRLNMDDPQLGGVGDET---NQLGVIEMLEIPSTTVPEQLKNKFAALEEKVEGMFQRMTQLLKRLEQQETDKSPLLRDPRKGK

Query:  ---ESCTKRDFN---------------------------------------------------KEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTE
           ES T+   N                                                   K K  ++PE SE++   KEKGF+LEELLDQADSP TE
Subjt:  ---ESCTKRDFN---------------------------------------------------KEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTE

Query:  EIMREKVPPKFKLPVVKQLDESVDPVDHLDAYQE
        EIMREKVPPKFKLP VKQ D + DPVDHLDAY+E
Subjt:  EIMREKVPPKFKLPVVKQLDESVDPVDHLDAYQE

A0A6J1E1E7 uncharacterized protein LOC1110255485.6e-1870.83Show/hide
Query:  NKEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTEEIMREKVPPKFKLPVVKQLDESVDPVDHLDAYQE
        NK K +++PE SE++  QKEKGF+LEELL QADSP TEEIMREKVPPKFKLP VK  D   +PVDHLDAY+E
Subjt:  NKEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTEEIMREKVPPKFKLPVVKQLDESVDPVDHLDAYQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCCCCTCCAGCGAGCAAGAACCCTCAAGTTGGCAGCCATATCCCCACATCCAGATCCAGTGAGTATAATCGGCAAGGACAACATCGTTACTTCTGATCTC
GTCAAAGACGCACTAGGTTCGATAAGTTTAACCAGATTGAATGACTTGAACAAAATCTACGATAAAGAAGTTGAGCACGACAATAGCACCTCAAAGCATGGTGTT
GTAGATTTTCTTTTACCAAATCGGAATCAAATCAATGTAGATACCATGCACTACGTCTCCTTCAACGCATGGTTGAGGGCTGAGATCCCGAGGCAATTTGAATTG
GAATTGTCCACCATCAACAATTGGCGTCTTCTGTTGGGACATGTAATCATACAACCGATCATGACTCTGGAGAAAAGTCCACAACGCTCTGATGACGATTGCCAT
CCGAGGAGGAGGCTAAACATGGATGACCCTCAATTGGGAGGAGTTGGAGACGAAACGAACCAACTAGGAGTCATAGAAATGCTCGAGATCCCCTCTACTACTGTT
CCAGAGCAACTCAAGAATAAGTTTGCAGCCTTGGAAGAAAAGGTGGAAGGCATGTTTCAACGCATGACCCAACTACTCAAACGGTTAGAACAACAGGAGACAGAT
AAATCACCTCTACTCAGAGATCCCCGAAAAGGGAAAGAGTCCTGTACCAAGCGAGATTTCAACAAGGAGAAACTGGTGGAACAACCTGAGCCGTCAGAAAGACAA
TTAGGTCAGAAAGAAAAGGGATTTAATCTCGAAGAGCTACTAGATCAAGCTGATTCGCCGTGCACAGAAGAGATCATGAGGGAGAAGGTACCTCCAAAATTTAAA
CTACCAGTTGTAAAACAGCTTGACGAGTCGGTTGATCCGGTAGATCACCTTGATGCCTATCAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCCCCTCCAGCGAGCAAGAACCCTCAAGTTGGCAGCCATATCCCCACATCCAGATCCAGTGAGTATAATCGGCAAGGACAACATCGTTACTTCTGATCTC
GTCAAAGACGCACTAGGTTCGATAAGTTTAACCAGATTGAATGACTTGAACAAAATCTACGATAAAGAAGTTGAGCACGACAATAGCACCTCAAAGCATGGTGTT
GTAGATTTTCTTTTACCAAATCGGAATCAAATCAATGTAGATACCATGCACTACGTCTCCTTCAACGCATGGTTGAGGGCTGAGATCCCGAGGCAATTTGAATTG
GAATTGTCCACCATCAACAATTGGCGTCTTCTGTTGGGACATGTAATCATACAACCGATCATGACTCTGGAGAAAAGTCCACAACGCTCTGATGACGATTGCCAT
CCGAGGAGGAGGCTAAACATGGATGACCCTCAATTGGGAGGAGTTGGAGACGAAACGAACCAACTAGGAGTCATAGAAATGCTCGAGATCCCCTCTACTACTGTT
CCAGAGCAACTCAAGAATAAGTTTGCAGCCTTGGAAGAAAAGGTGGAAGGCATGTTTCAACGCATGACCCAACTACTCAAACGGTTAGAACAACAGGAGACAGAT
AAATCACCTCTACTCAGAGATCCCCGAAAAGGGAAAGAGTCCTGTACCAAGCGAGATTTCAACAAGGAGAAACTGGTGGAACAACCTGAGCCGTCAGAAAGACAA
TTAGGTCAGAAAGAAAAGGGATTTAATCTCGAAGAGCTACTAGATCAAGCTGATTCGCCGTGCACAGAAGAGATCATGAGGGAGAAGGTACCTCCAAAATTTAAA
CTACCAGTTGTAAAACAGCTTGACGAGTCGGTTGATCCGGTAGATCACCTTGATGCCTATCAGGAATGA
Protein sequenceShow/hide protein sequence
MSPLQRARTLKLAAISPHPDPVSIIGKDNIVTSDLVKDALGSISLTRLNDLNKIYDKEVEHDNSTSKHGVVDFLLPNRNQINVDTMHYVSFNAWLRAEIPRQFEL
ELSTINNWRLLLGHVIIQPIMTLEKSPQRSDDDCHPRRRLNMDDPQLGGVGDETNQLGVIEMLEIPSTTVPEQLKNKFAALEEKVEGMFQRMTQLLKRLEQQETD
KSPLLRDPRKGKESCTKRDFNKEKLVEQPEPSERQLGQKEKGFNLEELLDQADSPCTEEIMREKVPPKFKLPVVKQLDESVDPVDHLDAYQE