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Moc03g16560 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g16560
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:10964024..10964248
RNA-Seq ExpressionMoc03g16560
SyntenyMoc03g16560
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ00937.1 hypothetical protein Acr_14g0005720 [Actinidia rufa]2.8e-1857.69Show/hide
Query:  MARHYNARVRPRSFQVGHLVLKKI-----QSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHPWNAEHLKRYY
        +A++YN RVR RSF  G LVL+K+     + + G L P+WEGP++V  + RPGTY L DLEGK L+HPWNAEHLK+YY
Subjt:  MARHYNARVRPRSFQVGHLVLKKI-----QSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHPWNAEHLKRYY

XP_022144032.1 uncharacterized protein LOC111013824 [Momordica charantia]5.5e-2290.91Show/hide
Query:  VLKKIQSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHPWNAEHLKRYYP
        V +KIQSHVGTLDPSWEGPFEVKGI+R GTYMLADLEG VLAHPWNAEHLKRYYP
Subjt:  VLKKIQSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHPWNAEHLKRYYP

XP_022156070.1 uncharacterized protein K02A2.6-like [Momordica charantia]2.9e-2380.95Show/hide
Query:  MARHYNARVRPRSFQVGHLVLKKIQSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHP
        MARHYN+RVR RSFQ+G+LVL+K+Q HV  L+PSWEGPFEVKGIVRPGTYMLADLEGK+L+HP
Subjt:  MARHYNARVRPRSFQVGHLVLKKIQSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHP

XP_022156986.1 uncharacterized protein LOC111023816 [Momordica charantia]1.2e-1960.27Show/hide
Query:  MARHYNARVRPRSFQVGHLVLKKIQSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHPWNAEHLKRYY
        MAR+YNARV+ R+F+   LVLKK+  HVG L+P+WEGP+ V  I+RP  Y+L+DL G+ L HPWNAEHL+ YY
Subjt:  MARHYNARVRPRSFQVGHLVLKKIQSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHPWNAEHLKRYY

XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]3.8e-3187.84Show/hide
Query:  MARHYNARVRPRSFQVGHLVLKKIQSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHPWNAEHLKRYYP
        MARHYN R++PRSFQVGHLV  KIQSHVGTLDPSWE  FEVKGIVRPGTYMLADLE  VLAHPWNAEHLKRYYP
Subjt:  MARHYNARVRPRSFQVGHLVLKKIQSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHPWNAEHLKRYYP

TrEMBL top hitse value%identityAlignment
A0A2N9FYD5 Ribonuclease H3.6e-1955.7Show/hide
Query:  MARHYNARVRPRSFQVGHLVLKKI-----QSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHPWNAEHLKRYYP
        MARHYN+RV+PR   +G LVL+K+         G L P+WEGP++V  + RPGTY L D+ G+ L+HPWNAEHL+RYYP
Subjt:  MARHYNARVRPRSFQVGHLVLKKI-----QSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHPWNAEHLKRYYP

A0A6J1CSJ1 Ribonuclease H2.7e-2290.91Show/hide
Query:  VLKKIQSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHPWNAEHLKRYYP
        V +KIQSHVGTLDPSWEGPFEVKGI+R GTYMLADLEG VLAHPWNAEHLKRYYP
Subjt:  VLKKIQSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHPWNAEHLKRYYP

A0A6J1DP99 uncharacterized protein K02A2.6-like1.4e-2380.95Show/hide
Query:  MARHYNARVRPRSFQVGHLVLKKIQSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHP
        MARHYN+RVR RSFQ+G+LVL+K+Q HV  L+PSWEGPFEVKGIVRPGTYMLADLEGK+L+HP
Subjt:  MARHYNARVRPRSFQVGHLVLKKIQSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHP

A0A6J1DWM2 Ribonuclease H5.6e-2060.27Show/hide
Query:  MARHYNARVRPRSFQVGHLVLKKIQSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHPWNAEHLKRYY
        MAR+YNARV+ R+F+   LVLKK+  HVG L+P+WEGP+ V  I+RP  Y+L+DL G+ L HPWNAEHL+ YY
Subjt:  MARHYNARVRPRSFQVGHLVLKKIQSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHPWNAEHLKRYY

A0A6J1DXL9 uncharacterized protein LOC1110254481.8e-3187.84Show/hide
Query:  MARHYNARVRPRSFQVGHLVLKKIQSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHPWNAEHLKRYYP
        MARHYN R++PRSFQVGHLV  KIQSHVGTLDPSWE  FEVKGIVRPGTYMLADLE  VLAHPWNAEHLKRYYP
Subjt:  MARHYNARVRPRSFQVGHLVLKKIQSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHPWNAEHLKRYYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGACATTACAATGCCCGAGTTCGACCTCGAAGCTTCCAAGTTGGACATTTAGTCTTAAAAAAAATTCAGAGTCATGTCGGCACCCTTGACCCAAGTTGG
GAGGGACCATTCGAAGTCAAAGGCATAGTCCGACCTGGAACTTATATGCTGGCTGACCTGGAAGGAAAAGTGCTTGCGCATCCATGGAACGCGGAGCACTTGAAG
CGGTATTACCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGACATTACAATGCCCGAGTTCGACCTCGAAGCTTCCAAGTTGGACATTTAGTCTTAAAAAAAATTCAGAGTCATGTCGGCACCCTTGACCCAAGTTGG
GAGGGACCATTCGAAGTCAAAGGCATAGTCCGACCTGGAACTTATATGCTGGCTGACCTGGAAGGAAAAGTGCTTGCGCATCCATGGAACGCGGAGCACTTGAAG
CGGTATTACCCCTGA
Protein sequenceShow/hide protein sequence
MARHYNARVRPRSFQVGHLVLKKIQSHVGTLDPSWEGPFEVKGIVRPGTYMLADLEGKVLAHPWNAEHLKRYYP