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Moc03g16640 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g16640
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA-directed DNA polymerase
Genome locationchr3:11016027..11016834
RNA-Seq ExpressionMoc03g16640
SyntenyMoc03g16640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016504214.1 PREDICTED: uncharacterized protein LOC107822209, partial [Nicotiana tabacum]3.4e-1139.44Show/hide
Query:  ITKECSTILTSKIPRKMKD----------SGSFTIIVSI-------DKEVPIIFGRPFT---RRALDVHKGKVTMQNMSSSEKSVKQAYESLKLANREYN
        +T+ECS+ + SK+P+K+KD           GSF   V         D+E+P I GRPF    R  +DV++G +TM+        V    E  +L      
Subjt:  ITKECSTILTSKIPRKMKD----------SGSFTIIVSI-------DKEVPIIFGRPFT---RRALDVHKGKVTMQNMSSSEKSVKQAYESLKLANREYN

Query:  TL-KPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIVANLS
        TL KPS E+ P ++LK LP HL YAYL +SETLP+II ++L+
Subjt:  TL-KPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIVANLS

XP_022157452.1 uncharacterized protein LOC111024147 [Momordica charantia]3.6e-2142.16Show/hide
Query:  ITKECSTILTSKIPRKMKDSGSFTIIVSI--------------------------------------DKEVPIIFGRPFTRRA---LDVHKGKVTMQNMS
        +TKEC TILTSKIP+KMKDSGSFTI VSI                                       +EVPII GRPF  +    +DVHKG VTM+N +
Subjt:  ITKECSTILTSKIPRKMKDSGSFTIIVSI--------------------------------------DKEVPIIFGRPFTRRA---LDVHKGKVTMQNMS

Query:  SSEKSVKQ------------------------AYESLKLANREYNTLKPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIVANL
           +++ Q                         +E LKL       LKPS E+PP L+LKALPQHLKYAYL  + TLPIII ANL
Subjt:  SSEKSVKQ------------------------AYESLKLANREYNTLKPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIVANL

XP_023520803.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784278 [Cucurbita pepo subsp. pepo]2.3e-1237.06Show/hide
Query:  VALITKECSTILTSKIPRKMKDSGSFTIIVSI------------------DKEVPIIFGRPF---TRRALDVHKGKVTMQ--------NMSSSEK-----
        V  + +ECS IL +KIP K KD GSFTI VSI                  D  VPII GRPF    R  +DV+KG +T++        N++ + K     
Subjt:  VALITKECSTILTSKIPRKMKDSGSFTIIVSI------------------DKEVPIIFGRPF---TRRALDVHKGKVTMQ--------NMSSSEK-----

Query:  ------------SVKQAYESLKLANREYNTLKPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIVANLS
                      +   E  K   R+ + ++PS E+ P L  K LP +LKYAYL   +TLPIII A LS
Subjt:  ------------SVKQAYESLKLANREYNTLKPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIVANLS

XP_038887108.1 uncharacterized protein LOC120077291 [Benincasa hispida]5.7e-1130.73Show/hide
Query:  VALITKECSTILTSKIPRKMKDSGSFTIIVSI----------------------------------------DKEVPIIFGRPFT---RRALDVHKGKVT
        V  +T EC+ ++++ + +K KD GSFT+  SI                                        D+EVPII GRPF    +  +DVHKGK+ 
Subjt:  VALITKECSTILTSKIPRKMKDSGSFTIIVSI----------------------------------------DKEVPIIFGRPFT---RRALDVHKGKVT

Query:  MQ--------NMSSS-----------------------------EKSVKQAYESLKLANREYNTLKPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIV
        M         NM ++                             EK++K+  E   L+ R     +PS E+PP L+LK LP+HLKYA+L ++ TLP+II 
Subjt:  MQ--------NMSSS-----------------------------EKSVKQAYESLKLANREYNTLKPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIV

Query:  ANLSE
        ANL+E
Subjt:  ANLSE

XP_038887870.1 uncharacterized protein LOC120077859 [Benincasa hispida]5.2e-1231.86Show/hide
Query:  VALITKECSTILTSKIPRKMKDSGSFTIIVSI----------------------------------------DKEVPIIFGRPFT---RRALDVHKGKVT
        V  +T+EC+ ++++ +P+K KD GSFT+  SI                                        DKEVPII G PF    +  +DVHKG++ 
Subjt:  VALITKECSTILTSKIPRKMKDSGSFTIIVSI----------------------------------------DKEVPIIFGRPFT---RRALDVHKGKVT

Query:  MQ--------------NMSSSEK----------------SVKQAYESLK------LANREYNTLKPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIVA
        M+                S SE                  V    E+LK      L+ R  N  +PS E+PP L+LK LP HLKYA+L ++ TLP+II A
Subjt:  MQ--------------NMSSSEK----------------SVKQAYESLK------LANREYNTLKPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIVA

Query:  NLSE
        NL+E
Subjt:  NLSE

TrEMBL top hitse value%identityAlignment
A0A1S4CT84 uncharacterized protein LOC1078222091.6e-1139.44Show/hide
Query:  ITKECSTILTSKIPRKMKD----------SGSFTIIVSI-------DKEVPIIFGRPFT---RRALDVHKGKVTMQNMSSSEKSVKQAYESLKLANREYN
        +T+ECS+ + SK+P+K+KD           GSF   V         D+E+P I GRPF    R  +DV++G +TM+        V    E  +L      
Subjt:  ITKECSTILTSKIPRKMKD----------SGSFTIIVSI-------DKEVPIIFGRPFT---RRALDVHKGKVTMQNMSSSEKSVKQAYESLKLANREYN

Query:  TL-KPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIVANLS
        TL KPS E+ P ++LK LP HL YAYL +SETLP+II ++L+
Subjt:  TL-KPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIVANLS

A0A2G9GUK8 Uncharacterized protein1.1e-1031.18Show/hide
Query:  ITKECSTILTSKIPRKMKDSGSFTI---------------------------------IVSIDKEVPIIFGRPFT---RRALDVHKGKVTM---------
        +T+ECS I+ +K+  K+KD GSFTI                                  + +D E+PII GRPF    R  ++V KG++TM         
Subjt:  ITKECSTILTSKIPRKMKDSGSFTI---------------------------------IVSIDKEVPIIFGRPFT---RRALDVHKGKVTM---------

Query:  -------------------QNMSSSEKSVKQAYESLKLANREYNTLKPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIVANLSE
                           + + +S+    +  ESL+        LKPS E+PP L+LK LP HL YAYL  S+TL +II ++LS+
Subjt:  -------------------QNMSSSEKSVKQAYESLKLANREYNTLKPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIVANLSE

A0A5B6UTK7 Integrase, catalytic core3.6e-1138.35Show/hide
Query:  STILTSKIPRKMKDSGSFTII-VSIDKEVPIIFGRPFT---RRALDVHKGKVTMQNM-------------SSSEKSVKQAYESLKLANREYNTLKPSTED
        S + TS+   K      F I+     KE+ IIFGRPF    R  +DV KG++TM+               S+ E+   +++ESL+L+N  +   +PS ED
Subjt:  STILTSKIPRKMKDSGSFTII-VSIDKEVPIIFGRPFT---RRALDVHKGKVTMQNM-------------SSSEKSVKQAYESLKLANREYNTLKPSTED

Query:  PPILKLKALPQHLKYAYLDSSETLPIIIVANLS
        PP L+LK L  HLKYAYL  + TL ++I A L+
Subjt:  PPILKLKALPQHLKYAYLDSSETLPIIIVANLS

A0A6J1DUI2 uncharacterized protein LOC1110241471.7e-2142.16Show/hide
Query:  ITKECSTILTSKIPRKMKDSGSFTIIVSI--------------------------------------DKEVPIIFGRPFTRRA---LDVHKGKVTMQNMS
        +TKEC TILTSKIP+KMKDSGSFTI VSI                                       +EVPII GRPF  +    +DVHKG VTM+N +
Subjt:  ITKECSTILTSKIPRKMKDSGSFTIIVSI--------------------------------------DKEVPIIFGRPFTRRA---LDVHKGKVTMQNMS

Query:  SSEKSVKQ------------------------AYESLKLANREYNTLKPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIVANL
           +++ Q                         +E LKL       LKPS E+PP L+LKALPQHLKYAYL  + TLPIII ANL
Subjt:  SSEKSVKQ------------------------AYESLKLANREYNTLKPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIVANL

A0A6P4QGW1 uncharacterized protein LOC1084849512.3e-1045Show/hide
Query:  DKEVPIIFGRPF---TRRALDVHKGKVTMQ----NMSSSEKSVKQAY--ESLKLANREYNTLKPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIVANL
        DKEVPII GRPF   +R  +DV+KG++TM+     + ++   +K  +  ESL LANR     KPS E  P L+LK LP HL+Y +L    TLP+I+   L
Subjt:  DKEVPIIFGRPF---TRRALDVHKGKVTMQ----NMSSSEKSVKQAY--ESLKLANREYNTLKPSTEDPPILKLKALPQHLKYAYLDSSETLPIIIVANL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGCACTGATCACTAAGGAGTGTAGTACCATCCTTACAAGCAAAATTCCAAGAAAGATGAAGGATTCTGGAAGCTTCACCATAATAGTGTCTATAGATAAAGAGGT
CCCTATCATCTTTGGAAGGCCATTCACTAGAAGAGCACTCGATGTACATAAGGGCAAAGTGACAATGCAGAATATGAGCAGTAGTGAGAAGTCAGTGAAACAGGCATATG
AGTCGTTGAAGCTTGCAAACCGAGAATATAACACACTTAAGCCATCTACAGAAGATCCACCCATATTGAAGCTCAAAGCACTCCCACAACACTTGAAATATGCTTACTTG
GATTCTTCAGAAACTCTGCCTATCATAATCGTTGCAAATCTATCAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGCACTGATCACTAAGGAGTGTAGTACCATCCTTACAAGCAAAATTCCAAGAAAGATGAAGGATTCTGGAAGCTTCACCATAATAGTGTCTATAGATAAAGAGGT
CCCTATCATCTTTGGAAGGCCATTCACTAGAAGAGCACTCGATGTACATAAGGGCAAAGTGACAATGCAGAATATGAGCAGTAGTGAGAAGTCAGTGAAACAGGCATATG
AGTCGTTGAAGCTTGCAAACCGAGAATATAACACACTTAAGCCATCTACAGAAGATCCACCCATATTGAAGCTCAAAGCACTCCCACAACACTTGAAATATGCTTACTTG
GATTCTTCAGAAACTCTGCCTATCATAATCGTTGCAAATCTATCAGAATAA
Protein sequenceShow/hide protein sequence
MVALITKECSTILTSKIPRKMKDSGSFTIIVSIDKEVPIIFGRPFTRRALDVHKGKVTMQNMSSSEKSVKQAYESLKLANREYNTLKPSTEDPPILKLKALPQHLKYAYL
DSSETLPIIIVANLSE