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Moc03g16680 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g16680
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr3:11068396..11072083
RNA-Seq ExpressionMoc03g16680
SyntenyMoc03g16680
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]5.0e-1573.13Show/hide
Query:  IDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSL
        IDDL FVL E CP+A  P+AT AVR AYD W KAN KA+V ILASISDVL KKHE  ITA EIMDSL
Subjt:  IDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSL

XP_022154837.1 uncharacterized protein LOC111022000 [Momordica charantia]4.5e-1671.64Show/hide
Query:  IDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSL
        IDDL FVL E CP+AP P+AT AVR AYD W KAN KA+V IL+SISDVL KKHE  +TA EIMDSL
Subjt:  IDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSL

XP_022154928.1 uncharacterized protein LOC111022074 [Momordica charantia]8.2e-1858.49Show/hide
Query:  IDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSLIEKLVKSDLLSELDDNSLPDHLGVQINQKKQKE
        +DDLYFVL EAC EA R DATK VR AY+   KANSKARV ILA+ISD+L KKHETMITALEIMDSL +   K  L S++   +L       I+  + KE
Subjt:  IDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSLIEKLVKSDLLSELDDNSLPDHLGVQINQKKQKE

Query:  GKTIMG
        GK + G
Subjt:  GKTIMG

XP_022157449.1 uncharacterized protein LOC111024145 [Momordica charantia]1.7e-1567.16Show/hide
Query:  IDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSL
        +DDL F+L E CP+AP P+A +A R AYD W KAN KA V IL SISDVL+KKHE+M+TA EIMDSL
Subjt:  IDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSL

XP_022158062.1 uncharacterized protein LOC111024637 [Momordica charantia]2.9e-1565.71Show/hide
Query:  VCQIDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSL
        +  IDDL FVL E CP+AP P+AT AVR  YD W KAN KA+V+ILASISDVL KKHE  +   EIMDSL
Subjt:  VCQIDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSL

TrEMBL top hitse value%identityAlignment
A0A6J1DFZ2 uncharacterized protein LOC1110200952.4e-1573.13Show/hide
Query:  IDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSL
        IDDL FVL E CP+A  P+AT AVR AYD W KAN KA+V ILASISDVL KKHE  ITA EIMDSL
Subjt:  IDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSL

A0A6J1DLM1 uncharacterized protein LOC1110220744.0e-1858.49Show/hide
Query:  IDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSLIEKLVKSDLLSELDDNSLPDHLGVQINQKKQKE
        +DDLYFVL EAC EA R DATK VR AY+   KANSKARV ILA+ISD+L KKHETMITALEIMDSL +   K  L S++   +L       I+  + KE
Subjt:  IDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSLIEKLVKSDLLSELDDNSLPDHLGVQINQKKQKE

Query:  GKTIMG
        GK + G
Subjt:  GKTIMG

A0A6J1DMS3 uncharacterized protein LOC1110220002.2e-1671.64Show/hide
Query:  IDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSL
        IDDL FVL E CP+AP P+AT AVR AYD W KAN KA+V IL+SISDVL KKHE  +TA EIMDSL
Subjt:  IDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSL

A0A6J1DW68 uncharacterized protein LOC1110246371.4e-1565.71Show/hide
Query:  VCQIDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSL
        +  IDDL FVL E CP+AP P+AT AVR  YD W KAN KA+V+ILASISDVL KKHE  +   EIMDSL
Subjt:  VCQIDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSL

A0A6J1DWI4 uncharacterized protein LOC1110241458.3e-1667.16Show/hide
Query:  IDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSL
        +DDL F+L E CP+AP P+A +A R AYD W KAN KA V IL SISDVL+KKHE+M+TA EIMDSL
Subjt:  IDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTGCGCTTCTGTGCTGTAGCATCGCGACGCTATGCAGTGCCATGGCGCTGTGTGTGCCAAATAGATGATCTCTACTTTGTCTTAATGGAGGCATGTCCA
GAGGCCCCTAGACCTGACGCCACGAAAGCTGTTCGTGGTGCATATGATTGGTGGACAAAGGCCAACTCAAAGGCCCGAGTCAACATCTTGGCCAGCATATCTGAT
GTTTTGACTAAGAAGCATGAGACCATGATCACTGCACTCGAGATCATGGATTCATTGATTGAGAAACTTGTTAAGAGTGATCTCCTAAGTGAGTTAGACGACAAC
TCTTTACCAGACCATTTGGGAGTGCAAATTAATCAAAAGAAGCAAAAAGAAGGAAAAACCATCATGGGAGGCGCCAGGCGCCTGGGAGGCTGCAGAATTCCTGAT
TTTCTTCCAACTTTGCCCTTAATGAAACGCGTCTTCCAATGCGTTTTGGTGGTTCCAACCGATGCATACGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTGCGCTTCTGTGCTGTAGCATCGCGACGCTATGCAGTGCCATGGCGCTGTGTGTGCCAAATAGATGATCTCTACTTTGTCTTAATGGAGGCATGTCCA
GAGGCCCCTAGACCTGACGCCACGAAAGCTGTTCGTGGTGCATATGATTGGTGGACAAAGGCCAACTCAAAGGCCCGAGTCAACATCTTGGCCAGCATATCTGAT
GTTTTGACTAAGAAGCATGAGACCATGATCACTGCACTCGAGATCATGGATTCATTGATTGAGAAACTTGTTAAGAGTGATCTCCTAAGTGAGTTAGACGACAAC
TCTTTACCAGACCATTTGGGAGTGCAAATTAATCAAAAGAAGCAAAAAGAAGGAAAAACCATCATGGGAGGCGCCAGGCGCCTGGGAGGCTGCAGAATTCCTGAT
TTTCTTCCAACTTTGCCCTTAATGAAACGCGTCTTCCAATGCGTTTTGGTGGTTCCAACCGATGCATACGTGTAG
Protein sequenceShow/hide protein sequence
MALRFCAVASRRYAVPWRCVCQIDDLYFVLMEACPEAPRPDATKAVRGAYDWWTKANSKARVNILASISDVLTKKHETMITALEIMDSLIEKLVKSDLLSELDDN
SLPDHLGVQINQKKQKEGKTIMGGARRLGGCRIPDFLPTLPLMKRVFQCVLVVPTDAYV