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Moc03g16760 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g16760
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:11156074..11156388
RNA-Seq ExpressionMoc03g16760
SyntenyMoc03g16760
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]9.4e-3675.96Show/hide
Query:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG
        +I REEFD +K+KFDAQVE LK KCEKK++   DG++GESPFTSDILEA IP KFKTPTMKPY G KD KDY EVFEGLMDFQ  +DAIKCR FQIALTG
Subjt:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG

Query:  SVRL
        S RL
Subjt:  SVRL
XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]2.7e-3574.04Show/hide
Query:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG
        +I REEFDLMK++FD QVE LK +CEKK++   D ++GESPFTSDI+EAPIP KFKTPTMKPY G KD KDY EVFEGLMDFQ  +DAIKC AFQIALTG
Subjt:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG

Query:  SVRL
        S RL
Subjt:  SVRL
XP_022156542.1 uncharacterized protein LOC111023421 [Momordica charantia]1.2e-3574.04Show/hide
Query:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG
        +I REEFD ++ + DAQVE LK KCE+KD+ L DG++GESPFTSD+LEAPIP KFK PT+KPY G KD KDY EVFEGLMDFQ  SDAIKCRAFQIALTG
Subjt:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG

Query:  SVRL
        S RL
Subjt:  SVRL
XP_022158652.1 uncharacterized protein LOC111025109 [Momordica charantia]4.7e-3573.08Show/hide
Query:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG
        +I REEFD ++ + DAQVE LK KCE+KD+ L DG++GE PFTSD+LEAPIP KFK PT+KPY G KD KDY EVFEGLMDFQ  SDAIKCRAFQIALTG
Subjt:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG

Query:  SVRL
        S RL
Subjt:  SVRL
XP_022159160.1 uncharacterized protein LOC111025585 [Momordica charantia]4.7e-3574.51Show/hide
Query:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG
        +I REEFDLMK++FD QVETLK KCEK ++   DGEMGESPFTSD+LE PIP KFK P MKPY G KD KDY EVFE LMDFQ  SDAIKCRAFQIALTG
Subjt:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG

Query:  SV
        ++
Subjt:  SV
TrEMBL top hitse value%identityAlignment
A0A6J1DDW5 uncharacterized protein LOC1110196344.6e-3675.96Show/hide
Query:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG
        +I REEFD +K+KFDAQVE LK KCEKK++   DG++GESPFTSDILEA IP KFKTPTMKPY G KD KDY EVFEGLMDFQ  +DAIKCR FQIALTG
Subjt:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG

Query:  SVRL
        S RL
Subjt:  SVRL
A0A6J1DPC9 uncharacterized protein LOC1110222801.3e-3574.04Show/hide
Query:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG
        +I REEFDLMK++FD QVE LK +CEKK++   D ++GESPFTSDI+EAPIP KFKTPTMKPY G KD KDY EVFEGLMDFQ  +DAIKC AFQIALTG
Subjt:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG

Query:  SVRL
        S RL
Subjt:  SVRL
A0A6J1DS95 uncharacterized protein LOC1110234216.0e-3674.04Show/hide
Query:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG
        +I REEFD ++ + DAQVE LK KCE+KD+ L DG++GESPFTSD+LEAPIP KFK PT+KPY G KD KDY EVFEGLMDFQ  SDAIKCRAFQIALTG
Subjt:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG

Query:  SVRL
        S RL
Subjt:  SVRL
A0A6J1DXR9 uncharacterized protein LOC1110251092.3e-3573.08Show/hide
Query:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG
        +I REEFD ++ + DAQVE LK KCE+KD+ L DG++GE PFTSD+LEAPIP KFK PT+KPY G KD KDY EVFEGLMDFQ  SDAIKCRAFQIALTG
Subjt:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG

Query:  SVRL
        S RL
Subjt:  SVRL
A0A6J1DXW4 uncharacterized protein LOC1110255852.3e-3574.51Show/hide
Query:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG
        +I REEFDLMK++FD QVETLK KCEK ++   DGEMGESPFTSD+LE PIP KFK P MKPY G KD KDY EVFE LMDFQ  SDAIKCRAFQIALTG
Subjt:  MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTG

Query:  SV
        ++
Subjt:  SV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTATAAGGGAAGAGTTCGACTTGATGAAAAACAAGTTTGATGCTCAAGTCGAAACTCTAAAGCAGAAGTGTGAGAAGAAAGATAATGTGCTCGTTGACGGC
GAAATGGGTGAATCGCCGTTCACCTCGGACATTCTAGAAGCACCTATTCCTACCAAGTTCAAAACACCCACTATGAAGCCTTATGGTGGGTATAAGGACACAAAA
GATTATGAGGAGGTATTCGAAGGCCTCATGGATTTCCAGGTCGTGTCCGATGCCATAAAATGTCGAGCATTCCAGATTGCCTTGACTGGGAGTGTTCGACTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTATAAGGGAAGAGTTCGACTTGATGAAAAACAAGTTTGATGCTCAAGTCGAAACTCTAAAGCAGAAGTGTGAGAAGAAAGATAATGTGCTCGTTGACGGC
GAAATGGGTGAATCGCCGTTCACCTCGGACATTCTAGAAGCACCTATTCCTACCAAGTTCAAAACACCCACTATGAAGCCTTATGGTGGGTATAAGGACACAAAA
GATTATGAGGAGGTATTCGAAGGCCTCATGGATTTCCAGGTCGTGTCCGATGCCATAAAATGTCGAGCATTCCAGATTGCCTTGACTGGGAGTGTTCGACTCTAG
Protein sequenceShow/hide protein sequence
MIIREEFDLMKNKFDAQVETLKQKCEKKDNVLVDGEMGESPFTSDILEAPIPTKFKTPTMKPYGGYKDTKDYEEVFEGLMDFQVVSDAIKCRAFQIALTGSVRL