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Moc03g17010 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g17010
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein PAF1 homolog
Genome locationchr3:11283449..11283823
RNA-Seq ExpressionMoc03g17010
SyntenyMoc03g17010
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151603.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111019515 [Momordica charantia]3.0e-4790.91Show/hide
Query:  INPASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE
        +  ASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVP PPQLPFLERGPQAPQLNPNILSTFN GHLKP EPP MPIPTNM MD RVEHGGE
Subjt:  INPASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE

XP_022156604.1 protein PAF1 homolog [Momordica charantia]4.8e-4591.75Show/hide
Query:  PASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE
        PASVHPYGMPNPSTLFPSLPPYYGMG WVPP NY MISPRVP PPQLPFLERGPQAPQLNPNILSTFNMG LKPLEPP MPIPTNM MDT VEHGGE
Subjt:  PASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE

XP_022156936.1 uncharacterized protein LOC111023763 [Momordica charantia]8.8e-4792.71Show/hide
Query:  ASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE
        ASVHPYGMPNPSTLFPS PPYYGMGHWVPPHNYGMISPRVP PPQLPFLERGPQ PQLNPN LSTFNMGHLKPLEPPRMPIPTNM MD  VEHGGE
Subjt:  ASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE

XP_022158852.1 uncharacterized protein LOC111025316 [Momordica charantia]1.1e-4693.81Show/hide
Query:  PASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE
        PASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVP PPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEP RM IPTNM MDT  EHGGE
Subjt:  PASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE

XP_022158884.1 uncharacterized protein LOC111025345 [Momordica charantia]3.7e-4591.75Show/hide
Query:  PASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE
        PASVHPYGMPNPSTLFPSLPPYYGMGHWVPP NYGMISPRV  PPQLPFLER PQAPQLNPNILSTFNMG LKPLEPPRMP PTNM MDT VEHGGE
Subjt:  PASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE

TrEMBL top hitse value%identityAlignment
A0A6J1DCL7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110195151.5e-4790.91Show/hide
Query:  INPASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE
        +  ASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVP PPQLPFLERGPQAPQLNPNILSTFN GHLKP EPP MPIPTNM MD RVEHGGE
Subjt:  INPASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE

A0A6J1DTZ1 protein PAF1 homolog2.3e-4591.75Show/hide
Query:  PASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE
        PASVHPYGMPNPSTLFPSLPPYYGMG WVPP NY MISPRVP PPQLPFLERGPQAPQLNPNILSTFNMG LKPLEPP MPIPTNM MDT VEHGGE
Subjt:  PASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE

A0A6J1DWG3 uncharacterized protein LOC1110237634.2e-4792.71Show/hide
Query:  ASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE
        ASVHPYGMPNPSTLFPS PPYYGMGHWVPPHNYGMISPRVP PPQLPFLERGPQ PQLNPN LSTFNMGHLKPLEPPRMPIPTNM MD  VEHGGE
Subjt:  ASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE

A0A6J1DY94 uncharacterized protein LOC1110253165.5e-4793.81Show/hide
Query:  PASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE
        PASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVP PPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEP RM IPTNM MDT  EHGGE
Subjt:  PASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE

A0A6J1E0Q9 uncharacterized protein LOC1110253451.8e-4591.75Show/hide
Query:  PASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE
        PASVHPYGMPNPSTLFPSLPPYYGMGHWVPP NYGMISPRV  PPQLPFLER PQAPQLNPNILSTFNMG LKPLEPPRMP PTNM MDT VEHGGE
Subjt:  PASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAATCCGGCTAGTGTTCATCCTTATGGAATGCCCAACCCATCTACCCTATTTCCTAGCCTTCCACCTTATTATGGAATGGGTCATTGGGTACCTCCACACAATTA
TGGGATGATTTCACCTAGGGTTCCCCTACCACCTCAACTTCCATTCCTAGAAAGAGGACCTCAAGCACCCCAATTGAACCCTAACATATTGAGTACCTTCAACATGGGAC
ACCTAAAACCCTTAGAGCCTCCTAGGATGCCAATCCCAACCAATATGTCAATGGATACAAGAGTTGAGCATGGAGGAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCAATCCGGCTAGTGTTCATCCTTATGGAATGCCCAACCCATCTACCCTATTTCCTAGCCTTCCACCTTATTATGGAATGGGTCATTGGGTACCTCCACACAATTA
TGGGATGATTTCACCTAGGGTTCCCCTACCACCTCAACTTCCATTCCTAGAAAGAGGACCTCAAGCACCCCAATTGAACCCTAACATATTGAGTACCTTCAACATGGGAC
ACCTAAAACCCTTAGAGCCTCCTAGGATGCCAATCCCAACCAATATGTCAATGGATACAAGAGTTGAGCATGGAGGAGAGTAA
Protein sequenceShow/hide protein sequence
MINPASVHPYGMPNPSTLFPSLPPYYGMGHWVPPHNYGMISPRVPLPPQLPFLERGPQAPQLNPNILSTFNMGHLKPLEPPRMPIPTNMSMDTRVEHGGE