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Moc03g17290 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g17290
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionProtein Ycf2-like
Genome locationchr3:11479054..11480197
RNA-Seq ExpressionMoc03g17290
SyntenyMoc03g17290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035754.1 protein Ycf2-like [Cucumis melo var. makuwa]1.9e-0523.63Show/hide
Query:  GGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCK--DFLLANVGSGANGANGRG---------TNHAIYGTISRRSRWNSN
        GGFI  ++ WAYEVIP+LS+PPN++A RI  + PR++N+   T  + K +  K  D     V S     +  G         T   I        R N N
Subjt:  GGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCK--DFLLANVGSGANGANGRG---------TNHAIYGTISRRSRWNSN

Query:  GD--------RPFPSIWECNSINMILEQLNTSAGLEDDKLD---RFMMRGDVNMGTTFKTIYKVV----------MFQGTSSFINDLETLEARKDK----
         D        R  PS  E N +  ++E++  S    +  ++    F+   ++ M   F+ + + +           F G  +F   L+ +E  +++    
Subjt:  GD--------RPFPSIWECNSINMILEQLNTSAGLEDDKLD---RFMMRGDVNMGTTFKTIYKVV----------MFQGTSSFINDLETLEARKDK----

Query:  -----KKNDHPIDDHHQEKVSAGKGKMMRRTLQVDKDNHTLQLCKA---------------YDGLNDIDEQINEVIRCIEEDKIIEKMKMTE
               N   +     ++ + GKG M     +  + ++  Q   A               Y    + DE+IN +IR I+E  I +++K  E
Subjt:  -----KKNDHPIDDHHQEKVSAGKGKMMRRTLQVDKDNHTLQLCKA---------------YDGLNDIDEQINEVIRCIEEDKIIEKMKMTE

KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]4.2e-0546.43Show/hide
Query:  MGGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCKDF
        MGGFI  ++ WAYEVIP+LS+PPN++  RI  + PR++N    T  + K +  K F
Subjt:  MGGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCKDF

KAA0056158.1 protein Ycf2-like [Cucumis melo var. makuwa]8.4e-0650Show/hide
Query:  MGGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCKDF
        MGGFI  ++VWA EVIP+LS+PPNY+A RI  + PR++N+   T ++ K +  K F
Subjt:  MGGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCKDF

TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]4.2e-0547.27Show/hide
Query:  GGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCKDF
        GGFI  ++ WAYEVIP+LS+PPN++A RI  + PR++N+   T  + K +  K F
Subjt:  GGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCKDF

TYK23192.1 protein Ycf2-like [Cucumis melo var. makuwa]2.5e-0524.11Show/hide
Query:  GGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCKDF---------LLANVGSGANG--ANGRGTNHAIYGTISRRSRWNSN
        GGFI  ++ WAYEVIP+LS+PPN++A RI  + PR++N+   T  + K +  K F         +LA          A    T   I        R N N
Subjt:  GGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCKDF---------LLANVGSGANG--ANGRGTNHAIYGTISRRSRWNSN

Query:  GD--------RPFPSIWECNSINMILEQLNTSAGLEDDKLD---RFMMRGDVNMGTTFKTIYKVVMFQGTSSFINDLETLEARKDK---------KKNDH
         D        R  PS  E N +  ++E++  S    +  ++    F+   ++ M   F+ +       G  +F   L+ +E  +++           N  
Subjt:  GD--------RPFPSIWECNSINMILEQLNTSAGLEDDKLD---RFMMRGDVNMGTTFKTIYKVVMFQGTSSFINDLETLEARKDK---------KKNDH

Query:  PIDDHHQEKVSAGKGKMMRRTLQVDK--DNHTLQLCKA-------------YDGLNDIDEQINEVIRCIEEDKIIEKMKMTE
         +     ++   GKG M     +  +  D    ++ K+             Y    + DE+IN +IR I+E  I +++K  E
Subjt:  PIDDHHQEKVSAGKGKMMRRTLQVDK--DNHTLQLCKA-------------YDGLNDIDEQINEVIRCIEEDKIIEKMKMTE

TrEMBL top hitse value%identityAlignment
A0A5A7SWP9 Protein Ycf2-like9.1e-0623.63Show/hide
Query:  GGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCK--DFLLANVGSGANGANGRG---------TNHAIYGTISRRSRWNSN
        GGFI  ++ WAYEVIP+LS+PPN++A RI  + PR++N+   T  + K +  K  D     V S     +  G         T   I        R N N
Subjt:  GGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCK--DFLLANVGSGANGANGRG---------TNHAIYGTISRRSRWNSN

Query:  GD--------RPFPSIWECNSINMILEQLNTSAGLEDDKLD---RFMMRGDVNMGTTFKTIYKVV----------MFQGTSSFINDLETLEARKDK----
         D        R  PS  E N +  ++E++  S    +  ++    F+   ++ M   F+ + + +           F G  +F   L+ +E  +++    
Subjt:  GD--------RPFPSIWECNSINMILEQLNTSAGLEDDKLD---RFMMRGDVNMGTTFKTIYKVV----------MFQGTSSFINDLETLEARKDK----

Query:  -----KKNDHPIDDHHQEKVSAGKGKMMRRTLQVDKDNHTLQLCKA---------------YDGLNDIDEQINEVIRCIEEDKIIEKMKMTE
               N   +     ++ + GKG M     +  + ++  Q   A               Y    + DE+IN +IR I+E  I +++K  E
Subjt:  -----KKNDHPIDDHHQEKVSAGKGKMMRRTLQVDKDNHTLQLCKA---------------YDGLNDIDEQINEVIRCIEEDKIIEKMKMTE

A0A5A7U047 Protein Ycf2-like2.0e-0546.43Show/hide
Query:  MGGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCKDF
        MGGFI  ++ WAYEVIP+LS+PPN++  RI  + PR++N    T  + K +  K F
Subjt:  MGGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCKDF

A0A5A7UM43 Protein Ycf2-like4.1e-0650Show/hide
Query:  MGGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCKDF
        MGGFI  ++VWA EVIP+LS+PPNY+A RI  + PR++N+   T ++ K +  K F
Subjt:  MGGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCKDF

A0A5D3CEX9 Protein Ycf2-like2.0e-0547.27Show/hide
Query:  GGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCKDF
        GGFI  ++ WAYEVIP+LS+PPN++A RI  + PR++N+   T  + K +  K F
Subjt:  GGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCKDF

A0A5D3DHZ2 Protein Ycf2-like1.2e-0524.11Show/hide
Query:  GGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCKDF---------LLANVGSGANG--ANGRGTNHAIYGTISRRSRWNSN
        GGFI  ++ WAYEVIP+LS+PPN++A RI  + PR++N+   T  + K +  K F         +LA          A    T   I        R N N
Subjt:  GGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCKDF---------LLANVGSGANG--ANGRGTNHAIYGTISRRSRWNSN

Query:  GD--------RPFPSIWECNSINMILEQLNTSAGLEDDKLD---RFMMRGDVNMGTTFKTIYKVVMFQGTSSFINDLETLEARKDK---------KKNDH
         D        R  PS  E N +  ++E++  S    +  ++    F+   ++ M   F+ +       G  +F   L+ +E  +++           N  
Subjt:  GD--------RPFPSIWECNSINMILEQLNTSAGLEDDKLD---RFMMRGDVNMGTTFKTIYKVVMFQGTSSFINDLETLEARKDK---------KKNDH

Query:  PIDDHHQEKVSAGKGKMMRRTLQVDK--DNHTLQLCKA-------------YDGLNDIDEQINEVIRCIEEDKIIEKMKMTE
         +     ++   GKG M     +  +  D    ++ K+             Y    + DE+IN +IR I+E  I +++K  E
Subjt:  PIDDHHQEKVSAGKGKMMRRTLQVDK--DNHTLQLCKA-------------YDGLNDIDEQINEVIRCIEEDKIIEKMKMTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGGTTCATATCTGTGCTGATAGTGTGGGCGTACGAGGTTATACCTTCACTTAGTAGCCCACCAAATTATTATGCACGGAGGATTGGGTATGACACTCCA
CGAATGCTCAATTTCGGAAATCGAACTGCAGCCAGAGTGAAAGGAATTGGCTGCAAAGATTTTTTACTCGCCAACGTTGGAAGTGGTGCCAATGGAGCCAACGGA
AGAGGAACTAACCATGCTATATATGGCACTATTTCTCGAAGATCAAGATGGAACAGCAATGGGGACCGTCCATTTCCTAGCATTTGGGAGTGCAATAGCATAAAT
ATGATTCTTGAACAATTGAACACAAGTGCTGGACTAGAGGATGACAAACTCGATAGGTTTATGATGAGAGGAGATGTGAACATGGGAACTACATTCAAAACTATC
TACAAGGTTGTAATGTTTCAAGGGACATCATCATTTATAAATGATCTTGAGACTCTAGAAGCTCGAAAAGATAAGAAAAAGAATGACCATCCAATTGATGATCAC
CACCAAGAAAAAGTCTCAGCTGGCAAAGGAAAGATGATGAGGAGGACCCTACAGGTGGACAAAGACAACCACACCTTGCAGTTGTGCAAGGCATATGATGGACTT
AATGATATTGATGAACAAATCAATGAGGTTATAAGATGTATTGAGGAGGACAAAATTATTGAGAAGATGAAAATGACCGAAACAGGGGGGGCAGCGGTGAGAAAG
GTGACCTTTTGTTTTATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGGTTCATATCTGTGCTGATAGTGTGGGCGTACGAGGTTATACCTTCACTTAGTAGCCCACCAAATTATTATGCACGGAGGATTGGGTATGACACTCCA
CGAATGCTCAATTTCGGAAATCGAACTGCAGCCAGAGTGAAAGGAATTGGCTGCAAAGATTTTTTACTCGCCAACGTTGGAAGTGGTGCCAATGGAGCCAACGGA
AGAGGAACTAACCATGCTATATATGGCACTATTTCTCGAAGATCAAGATGGAACAGCAATGGGGACCGTCCATTTCCTAGCATTTGGGAGTGCAATAGCATAAAT
ATGATTCTTGAACAATTGAACACAAGTGCTGGACTAGAGGATGACAAACTCGATAGGTTTATGATGAGAGGAGATGTGAACATGGGAACTACATTCAAAACTATC
TACAAGGTTGTAATGTTTCAAGGGACATCATCATTTATAAATGATCTTGAGACTCTAGAAGCTCGAAAAGATAAGAAAAAGAATGACCATCCAATTGATGATCAC
CACCAAGAAAAAGTCTCAGCTGGCAAAGGAAAGATGATGAGGAGGACCCTACAGGTGGACAAAGACAACCACACCTTGCAGTTGTGCAAGGCATATGATGGACTT
AATGATATTGATGAACAAATCAATGAGGTTATAAGATGTATTGAGGAGGACAAAATTATTGAGAAGATGAAAATGACCGAAACAGGGGGGGCAGCGGTGAGAAAG
GTGACCTTTTGTTTTATTTAG
Protein sequenceShow/hide protein sequence
MGGFISVLIVWAYEVIPSLSSPPNYYARRIGYDTPRMLNFGNRTAARVKGIGCKDFLLANVGSGANGANGRGTNHAIYGTISRRSRWNSNGDRPFPSIWECNSIN
MILEQLNTSAGLEDDKLDRFMMRGDVNMGTTFKTIYKVVMFQGTSSFINDLETLEARKDKKKNDHPIDDHHQEKVSAGKGKMMRRTLQVDKDNHTLQLCKAYDGL
NDIDEQINEVIRCIEEDKIIEKMKMTETGGAAVRKVTFCFI