; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g17430 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g17430
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr3:11556404..11558596
RNA-Seq ExpressionMoc03g17430
SyntenyMoc03g17430
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151295.1 uncharacterized protein LOC111019259 [Momordica charantia]2.9e-5475.5Show/hide
Query:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS
        MS SIIALLA ++LN ENYKQ KSNLN ILVI+DLRFVLQE+ P  P  +ATVAV   YDRWIKANDKA+VYIL SIS+V AKKHE+ VTAKEIMDSLQS
Subjt:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS

Query:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE
        MFGQ SSQA+HE LKF+YNS MKEG S+REHVLNLM+HFN+AE+N  +IDE
Subjt:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE

XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]5.7e-7193.38Show/hide
Query:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS
        MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDL+FVLQEDCPQ   PNATVAVR AYDRWIKANDKAKVYILASISDV AKKHED +TAKEIMDSLQS
Subjt:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS

Query:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE
        MFGQPSSQARHEALKFIYNSRMKEGSS+REHVLNLMVHFNVAESNG VIDE
Subjt:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE

XP_022157844.1 uncharacterized protein LOC111024457 [Momordica charantia]2.2e-5469.54Show/hide
Query:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS
        M++SI+ LLA+++LNG NY  WK+NLNTILV+DDLRFVL E+CPQTP  NA   VR A+DRW+KANDKA+VYILAS++DV AKKHE  +TAKEIMDSL++
Subjt:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS

Query:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE
        MFG+PSS  RHEALK++YN  MKEG+S+REHVL++MVHFN AE NG  IDE
Subjt:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE

XP_022158062.1 uncharacterized protein LOC111024637 [Momordica charantia]4.0e-6486.09Show/hide
Query:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS
        MSTSII LL AQ+LN ENYKQWKSN+NTIL+IDDLRFVLQEDCPQ P PNATVAVRN YDRWIKANDKAKV ILASISDV AKKHE+ V  KEIMDSLQS
Subjt:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS

Query:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE
        MFGQPSSQARHEAL  IYNSRMK+ SS+REHVLNLMVHFNVAESN TVIDE
Subjt:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]6.3e-7091.39Show/hide
Query:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS
        MS SIIALLAAQ+LNGENY+QWKSNLNTILVIDDLRFVLQEDCPQ PV NATVAVRNAYDRWIK+NDKAKVYILASISDV AKKHED VT KEIMDSLQS
Subjt:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS

Query:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE
        MFGQPS QARHEALKF+YNSRMKEGSS+REHVLNLMVHFNVAESNG VIDE
Subjt:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE

TrEMBL top hitse value%identityAlignment
A0A6J1DAT1 uncharacterized protein LOC1110192591.4e-5475.5Show/hide
Query:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS
        MS SIIALLA ++LN ENYKQ KSNLN ILVI+DLRFVLQE+ P  P  +ATVAV   YDRWIKANDKA+VYIL SIS+V AKKHE+ VTAKEIMDSLQS
Subjt:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS

Query:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE
        MFGQ SSQA+HE LKF+YNS MKEG S+REHVLNLM+HFN+AE+N  +IDE
Subjt:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE

A0A6J1DFZ2 uncharacterized protein LOC1110200952.8e-7193.38Show/hide
Query:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS
        MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDL+FVLQEDCPQ   PNATVAVR AYDRWIKANDKAKVYILASISDV AKKHED +TAKEIMDSLQS
Subjt:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS

Query:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE
        MFGQPSSQARHEALKFIYNSRMKEGSS+REHVLNLMVHFNVAESNG VIDE
Subjt:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE

A0A6J1DW68 uncharacterized protein LOC1110246371.9e-6486.09Show/hide
Query:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS
        MSTSII LL AQ+LN ENYKQWKSN+NTIL+IDDLRFVLQEDCPQ P PNATVAVRN YDRWIKANDKAKV ILASISDV AKKHE+ V  KEIMDSLQS
Subjt:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS

Query:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE
        MFGQPSSQARHEAL  IYNSRMK+ SS+REHVLNLMVHFNVAESN TVIDE
Subjt:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE

A0A6J1DWL0 uncharacterized protein LOC1110247343.1e-7091.39Show/hide
Query:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS
        MS SIIALLAAQ+LNGENY+QWKSNLNTILVIDDLRFVLQEDCPQ PV NATVAVRNAYDRWIK+NDKAKVYILASISDV AKKHED VT KEIMDSLQS
Subjt:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS

Query:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE
        MFGQPS QARHEALKF+YNSRMKEGSS+REHVLNLMVHFNVAESNG VIDE
Subjt:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE

A0A6J1DXQ5 uncharacterized protein LOC1110244571.1e-5469.54Show/hide
Query:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS
        M++SI+ LLA+++LNG NY  WK+NLNTILV+DDLRFVL E+CPQTP  NA   VR A+DRW+KANDKA+VYILAS++DV AKKHE  +TAKEIMDSL++
Subjt:  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKAKVYILASISDVHAKKHEDKVTAKEIMDSLQS

Query:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE
        MFG+PSS  RHEALK++YN  MKEG+S+REHVL++MVHFN AE NG  IDE
Subjt:  MFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGAGGGCCGCGGCGCTGCTGCTGCAGCATTTTGCTGCAGTAGCGCCGTGGCGCTGCCCTTAGGCGCCGAGGCGCTGTCCCGGGTGTTTTCGACGCGGTTCCGAGG
CTCCGATTCGCGCATGTCTACTTCTATTATTGCACTCTTAGCCGCGCAAAGACTTAATGGCGAAAATTACAAACAATGGAAGTCAAACCTAAACACTATTCTCGTGATAG
ATGATCTTAGGTTCGTCTTGCAAGAGGATTGTCCTCAAACTCCTGTGCCTAACGCCACTGTGGCGGTGCGCAATGCCTATGACAGGTGGATCAAGGCAAATGACAAGGCC
AAGGTCTACATCTTGGCGAGCATATCTGATGTGCATGCCAAGAAGCACGAGGACAAGGTCACCGCTAAGGAGATCATGGACTCGCTGCAGAGCATGTTTGGACAACCGTC
CTCACAGGCTCGACATGAAGCCCTTAAGTTCATTTACAACTCCCGCATGAAGGAGGGCTCCTCAATGCGAGAACACGTTCTCAACCTGATGGTCCACTTCAACGTGGCTG
AGTCGAACGGGACCGTCATAGACGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAGAGGGCCGCGGCGCTGCTGCTGCAGCATTTTGCTGCAGTAGCGCCGTGGCGCTGCCCTTAGGCGCCGAGGCGCTGTCCCGGGTGTTTTCGACGCGGTTCCGAGG
CTCCGATTCGCGCATGTCTACTTCTATTATTGCACTCTTAGCCGCGCAAAGACTTAATGGCGAAAATTACAAACAATGGAAGTCAAACCTAAACACTATTCTCGTGATAG
ATGATCTTAGGTTCGTCTTGCAAGAGGATTGTCCTCAAACTCCTGTGCCTAACGCCACTGTGGCGGTGCGCAATGCCTATGACAGGTGGATCAAGGCAAATGACAAGGCC
AAGGTCTACATCTTGGCGAGCATATCTGATGTGCATGCCAAGAAGCACGAGGACAAGGTCACCGCTAAGGAGATCATGGACTCGCTGCAGAGCATGTTTGGACAACCGTC
CTCACAGGCTCGACATGAAGCCCTTAAGTTCATTTACAACTCCCGCATGAAGGAGGGCTCCTCAATGCGAGAACACGTTCTCAACCTGATGGTCCACTTCAACGTGGCTG
AGTCGAACGGGACCGTCATAGACGAGTAG
Protein sequenceShow/hide protein sequence
MPEGRGAAAAAFCCSSAVALPLGAEALSRVFSTRFRGSDSRMSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQTPVPNATVAVRNAYDRWIKANDKA
KVYILASISDVHAKKHEDKVTAKEIMDSLQSMFGQPSSQARHEALKFIYNSRMKEGSSMREHVLNLMVHFNVAESNGTVIDE