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Moc03g17470 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g17470
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:11575330..11575777
RNA-Seq ExpressionMoc03g17470
SyntenyMoc03g17470
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC04260.1 hypothetical protein L484_002345 [Morus notabilis]9.9e-1355.71Show/hide
Query:  RGLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLWDCEKIRA
        RG+GF   GAFN+ALLAKQG+ +L  PSSL+A + K KYFP   FLDA +G N S+ WRS+LW  E +++
Subjt:  RGLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLWDCEKIRA

XP_015382226.1 uncharacterized protein LOC107175329, partial [Citrus sinensis]7.6e-1359.68Show/hide
Query:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLW
        G+GF     FN+AL+AKQG+ ++ HP SL+ARVLK KYF  S F++AKLGS  SF+WRS+LW
Subjt:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLW

XP_022159057.1 uncharacterized protein LOC111025497 [Momordica charantia]7.6e-1360.29Show/hide
Query:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLWDCEKIR
        GLGF     FN+ALLAKQG+ +   PSSLLA VLK KYF    F++A +GS ASFIWRSLLW C+ +R
Subjt:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLWDCEKIR

XP_024043083.1 uncharacterized protein LOC112099827 [Citrus clementina]4.0e-1454.93Show/hide
Query:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLWDCEKIRAHF
        GLGF    +FN+AL+AKQG+ L+ +P+SL+ARV+K +Y+  S F +AK+GSN SFIWRS+LW  +K+  HF
Subjt:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLWDCEKIRAHF

XP_024044510.1 uncharacterized protein LOC112100177 [Citrus clementina]3.4e-1359.68Show/hide
Query:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLW
        GLGF     FN+AL+AKQG+ +L+ P SL+A++LK KYF  +GF++AKLGSN SF+WRS+LW
Subjt:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLW

TrEMBL top hitse value%identityAlignment
A0A1S8ABR9 RNA-directed DNA polymerase reverse transcriptase family protein (Fragment)4.8e-1359.68Show/hide
Query:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLW
        GLGF    +FN+AL+AKQG+ +L +P SL+AR+LK KYF  + F+DAKLGS  SF+WRS+LW
Subjt:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLW

A0A1S8AC01 Ribonuclease H-like superfamily protein7.4e-1460.87Show/hide
Query:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLWDCEKIRA
        GLGF    +FN+AL+AKQG+ LL HP SL ARVL+ KYF  + FL+AKLGSN SFIWRS++W  + I A
Subjt:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLWDCEKIRA

A0A6J1DYS7 uncharacterized protein LOC1110254973.7e-1360.29Show/hide
Query:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLWDCEKIR
        GLGF     FN+ALLAKQG+ +   PSSLLA VLK KYF    F++A +GS ASFIWRSLLW C+ +R
Subjt:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLWDCEKIR

A0A803PHH5 Uncharacterized protein4.8e-1358.21Show/hide
Query:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLWDCEKI
        GLGF     FN+ALLAKQG+HL++ P SLLARVLKH Y+P + FL+AK   NAS IW+ ++W  E I
Subjt:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLWDCEKI

W9RQV7 Uncharacterized protein4.8e-1355.71Show/hide
Query:  RGLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLWDCEKIRA
        RG+GF   GAFN+ALLAKQG+ +L  PSSL+A + K KYFP   FLDA +G N S+ WRS+LW  E +++
Subjt:  RGLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLWDCEKIRA

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003104.8e-1044.26Show/hide
Query:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLL
        GLGF   G FN+ALLAKQ + +++ P +LL+R+L+ +YFP S  ++  +G+  S+ WRS++
Subjt:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLL

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein1.1e-0950Show/hide
Query:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSL
        G+GF    AFN ALL KQ + +L  P SL+A+V K +YF  S  L+A LGS  SF+W+S+
Subjt:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSL

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.4e-1144.26Show/hide
Query:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLL
        GLGF   G FN+ALLAKQ + +++ P +LL+R+L+ +YFP S  ++  +G+  S+ WRS++
Subjt:  GLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCGGGGGCTTGGATTTCTGAGATCTGGTGCATTTAACCGGGCTTTGTTGGCCAAGCAGGGCTACCATCTCCTCTATCACCCCTCCTCTCTTCTTGCACGT
GTGTTGAAGCATAAATATTTTCCGACCAGTGGTTTTCTTGATGCCAAGCTAGGTTCGAATGCCTCCTTCATTTGGCGTAGCCTACTCTGGGATTGCGAAAAGATC
AGAGCTCACTTTGAGAATCCATTCAAACTGAAAACTGATTCGTTTGGGGTTTTTCAATCTCTTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCGGGGGCTTGGATTTCTGAGATCTGGTGCATTTAACCGGGCTTTGTTGGCCAAGCAGGGCTACCATCTCCTCTATCACCCCTCCTCTCTTCTTGCACGT
GTGTTGAAGCATAAATATTTTCCGACCAGTGGTTTTCTTGATGCCAAGCTAGGTTCGAATGCCTCCTTCATTTGGCGTAGCCTACTCTGGGATTGCGAAAAGATC
AGAGCTCACTTTGAGAATCCATTCAAACTGAAAACTGATTCGTTTGGGGTTTTTCAATCTCTTGAATAA
Protein sequenceShow/hide protein sequence
MFRGLGFLRSGAFNRALLAKQGYHLLYHPSSLLARVLKHKYFPTSGFLDAKLGSNASFIWRSLLWDCEKIRAHFENPFKLKTDSFGVFQSLE