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Moc03g17580 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g17580
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr3:11629412..11630621
RNA-Seq ExpressionMoc03g17580
SyntenyMoc03g17580
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141796.1 uncharacterized protein LOC111012081 [Momordica charantia]3.9e-3340.57Show/hide
Query:  DSMKEVISKLQNDFEALKQSCKADDASWVELGEREDPPFTAPLMAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQAR
        +   ++  +L    EALK  C+  +   +  G+  + PFT+ ++  P+PPK K P +K YDGS DP D+++++EGLM+  A  D +KC+AF + L G AR
Subjt:  DSMKEVISKLQNDFEALKQSCKADDASWVELGEREDPPFTAPLMAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQAR

Query:  SWYRQLKPKTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQTEDESLRDFVERFMAKQIKVPYCSDDATRMTF
         WYR+L  +++ ++ QLR+ F++QF ++H  K   THL TI Q E E+LR++V RF  +Q+KV +CSDD+    F
Subjt:  SWYRQLKPKTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQTEDESLRDFVERFMAKQIKVPYCSDDATRMTF

XP_022151609.1 uncharacterized protein LOC111019523 [Momordica charantia]7.3e-4871.97Show/hide
Query:  MAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQARSWYRQLKPKTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQ
        MAYPLPPKMKKPDMK YD   +PIDHI+LYEGLMEL+A GD+MKC+AFSVTLKG+ARSWYRQLK K++  W QLRK+FI+QF AQHDRK  DTHLLTI+Q
Subjt:  MAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQARSWYRQLKPKTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQ

Query:  TEDESLRDFVERFMAKQIKVPYCSDDATRMTF
         E ESL +FV RF+ ++IKV  CS+D  RMTF
Subjt:  TEDESLRDFVERFMAKQIKVPYCSDDATRMTF

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]1.2e-3441.71Show/hide
Query:  DSMKEVISKLQNDFEALKQSCKADDASWVELGEREDPPFTAPLMAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQAR
        +   ++ SK     EALK  C+  ++++ + G+  + PFT+ ++   +PPK K P MKSYDGS DP D+++++EGLM+  AA D +KC+AF + L G AR
Subjt:  DSMKEVISKLQNDFEALKQSCKADDASWVELGEREDPPFTAPLMAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQAR

Query:  SWYRQLKPKTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQTEDESLRDFVERFMAKQIKVPYCSDDATRMTF
         WYR+L  +++ ++ QLRK FISQF ++H  +   THL TI Q E ++L++++ RF  +Q+KV +CSDD++   F
Subjt:  SWYRQLKPKTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQTEDESLRDFVERFMAKQIKVPYCSDDATRMTF

XP_022156542.1 uncharacterized protein LOC111023421 [Momordica charantia]4.6e-3441.71Show/hide
Query:  DSMKEVISKLQNDFEALKQSCKADDASWVELGEREDPPFTAPLMAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQAR
        +   ++  +L    EALK  C+  D S +  G+  + PFT+ ++  P+PPK K P +K YDG+ DP D+++++EGLM+  AA D +KC+AF + L G AR
Subjt:  DSMKEVISKLQNDFEALKQSCKADDASWVELGEREDPPFTAPLMAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQAR

Query:  SWYRQLKPKTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQTEDESLRDFVERFMAKQIKVPYCSDDATRMTF
         WYR+L  +++ ++ QLR+ F++QF ++H  K   THL TI Q E E+LR++V RF  +Q+KV +CSDD+    F
Subjt:  SWYRQLKPKTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQTEDESLRDFVERFMAKQIKVPYCSDDATRMTF

XP_022159250.1 uncharacterized protein LOC111025663 [Momordica charantia]5.4e-3544.91Show/hide
Query:  KLQNDFEALKQSCKADDASWVELGEREDPPFTAPLMAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQARSWYRQLKP
        K     EALK  C+  + S+ + G+  + PFT+ ++  P+PPK K P MK YDGS DP D+++++EGLM+  AA D +KC+AF + L   AR WYR+L  
Subjt:  KLQNDFEALKQSCKADDASWVELGEREDPPFTAPLMAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQARSWYRQLKP

Query:  KTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQTEDESLRDFVERFMAKQIKVPYCSDDATRMTF
        +++ ++ QLRK FISQF ++H  +   THL TI Q E E+LR++V RF+ +Q+KV +CSDD+    F
Subjt:  KTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQTEDESLRDFVERFMAKQIKVPYCSDDATRMTF

TrEMBL top hitse value%identityAlignment
A0A6J1CKB3 uncharacterized protein LOC1110120811.9e-3340.57Show/hide
Query:  DSMKEVISKLQNDFEALKQSCKADDASWVELGEREDPPFTAPLMAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQAR
        +   ++  +L    EALK  C+  +   +  G+  + PFT+ ++  P+PPK K P +K YDGS DP D+++++EGLM+  A  D +KC+AF + L G AR
Subjt:  DSMKEVISKLQNDFEALKQSCKADDASWVELGEREDPPFTAPLMAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQAR

Query:  SWYRQLKPKTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQTEDESLRDFVERFMAKQIKVPYCSDDATRMTF
         WYR+L  +++ ++ QLR+ F++QF ++H  K   THL TI Q E E+LR++V RF  +Q+KV +CSDD+    F
Subjt:  SWYRQLKPKTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQTEDESLRDFVERFMAKQIKVPYCSDDATRMTF

A0A6J1DDJ7 uncharacterized protein LOC1110195233.5e-4871.97Show/hide
Query:  MAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQARSWYRQLKPKTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQ
        MAYPLPPKMKKPDMK YD   +PIDHI+LYEGLMEL+A GD+MKC+AFSVTLKG+ARSWYRQLK K++  W QLRK+FI+QF AQHDRK  DTHLLTI+Q
Subjt:  MAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQARSWYRQLKPKTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQ

Query:  TEDESLRDFVERFMAKQIKVPYCSDDATRMTF
         E ESL +FV RF+ ++IKV  CS+D  RMTF
Subjt:  TEDESLRDFVERFMAKQIKVPYCSDDATRMTF

A0A6J1DPN4 uncharacterized protein LOC1110230605.8e-3541.71Show/hide
Query:  DSMKEVISKLQNDFEALKQSCKADDASWVELGEREDPPFTAPLMAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQAR
        +   ++ SK     EALK  C+  ++++ + G+  + PFT+ ++   +PPK K P MKSYDGS DP D+++++EGLM+  AA D +KC+AF + L G AR
Subjt:  DSMKEVISKLQNDFEALKQSCKADDASWVELGEREDPPFTAPLMAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQAR

Query:  SWYRQLKPKTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQTEDESLRDFVERFMAKQIKVPYCSDDATRMTF
         WYR+L  +++ ++ QLRK FISQF ++H  +   THL TI Q E ++L++++ RF  +Q+KV +CSDD++   F
Subjt:  SWYRQLKPKTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQTEDESLRDFVERFMAKQIKVPYCSDDATRMTF

A0A6J1DS95 uncharacterized protein LOC1110234212.2e-3441.71Show/hide
Query:  DSMKEVISKLQNDFEALKQSCKADDASWVELGEREDPPFTAPLMAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQAR
        +   ++  +L    EALK  C+  D S +  G+  + PFT+ ++  P+PPK K P +K YDG+ DP D+++++EGLM+  AA D +KC+AF + L G AR
Subjt:  DSMKEVISKLQNDFEALKQSCKADDASWVELGEREDPPFTAPLMAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQAR

Query:  SWYRQLKPKTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQTEDESLRDFVERFMAKQIKVPYCSDDATRMTF
         WYR+L  +++ ++ QLR+ F++QF ++H  K   THL TI Q E E+LR++V RF  +Q+KV +CSDD+    F
Subjt:  SWYRQLKPKTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQTEDESLRDFVERFMAKQIKVPYCSDDATRMTF

A0A6J1DY58 uncharacterized protein LOC1110256632.6e-3544.91Show/hide
Query:  KLQNDFEALKQSCKADDASWVELGEREDPPFTAPLMAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQARSWYRQLKP
        K     EALK  C+  + S+ + G+  + PFT+ ++  P+PPK K P MK YDGS DP D+++++EGLM+  AA D +KC+AF + L   AR WYR+L  
Subjt:  KLQNDFEALKQSCKADDASWVELGEREDPPFTAPLMAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQARSWYRQLKP

Query:  KTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQTEDESLRDFVERFMAKQIKVPYCSDDATRMTF
        +++ ++ QLRK FISQF ++H  +   THL TI Q E E+LR++V RF+ +Q+KV +CSDD+    F
Subjt:  KTVGSWKQLRKIFISQFLAQHDRKMPDTHLLTIYQTEDESLRDFVERFMAKQIKVPYCSDDATRMTF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGACTTTGGGTCGTGGCTCTGTGTCTTTATCGATAAAGGTCTCTAATCTATGGCTTTCTAGGATCACAGAAGCCCCTGACCTCCGCCAGACATTGAATGAGCGCAT
TGCACCTCAACAAGTTGGTCAACAAACTCCGGCTACACCGAATTGGGGATCTACCCCCGCAACGGTTGGGGTCAATTCGAATACGATTTACCGGCCATCGCTTGCTACGA
CGACCGCCACTACATCGACGTATCAAGCCACGGTTGATGTACCGGAGGTGCATGATTCTATGAAAGAAGTAATTAGTAAGCTTCAGAATGACTTCGAGGCTTTAAAGCAA
AGTTGTAAAGCGGATGATGCCAGTTGGGTGGAGTTAGGTGAACGAGAAGATCCTCCTTTCACGGCTCCCTTAATGGCATATCCACTCCCACCAAAGATGAAGAAACCTGA
CATGAAATCGTACGATGGATCAACCGACCCGATTGATCACATCGACTTGTACGAAGGCTTGATGGAGTTAAATGCTGCAGGAGACGAAATGAAATGCAAGGCGTTCTCCG
TCACTTTGAAAGGCCAAGCTAGGTCCTGGTACAGGCAATTGAAGCCTAAAACCGTCGGGTCCTGGAAACAGTTGAGGAAGATCTTCATAAGCCAATTTTTGGCGCAACAT
GACAGAAAAATGCCCGACACACATCTCCTCACCATTTATCAAACGGAGGATGAGTCGCTGCGTGACTTCGTCGAGAGATTTATGGCAAAGCAAATTAAAGTCCCATACTG
CTCGGATGATGCAACTAGGATGACTTTCACATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGACTTTGGGTCGTGGCTCTGTGTCTTTATCGATAAAGGTCTCTAATCTATGGCTTTCTAGGATCACAGAAGCCCCTGACCTCCGCCAGACATTGAATGAGCGCAT
TGCACCTCAACAAGTTGGTCAACAAACTCCGGCTACACCGAATTGGGGATCTACCCCCGCAACGGTTGGGGTCAATTCGAATACGATTTACCGGCCATCGCTTGCTACGA
CGACCGCCACTACATCGACGTATCAAGCCACGGTTGATGTACCGGAGGTGCATGATTCTATGAAAGAAGTAATTAGTAAGCTTCAGAATGACTTCGAGGCTTTAAAGCAA
AGTTGTAAAGCGGATGATGCCAGTTGGGTGGAGTTAGGTGAACGAGAAGATCCTCCTTTCACGGCTCCCTTAATGGCATATCCACTCCCACCAAAGATGAAGAAACCTGA
CATGAAATCGTACGATGGATCAACCGACCCGATTGATCACATCGACTTGTACGAAGGCTTGATGGAGTTAAATGCTGCAGGAGACGAAATGAAATGCAAGGCGTTCTCCG
TCACTTTGAAAGGCCAAGCTAGGTCCTGGTACAGGCAATTGAAGCCTAAAACCGTCGGGTCCTGGAAACAGTTGAGGAAGATCTTCATAAGCCAATTTTTGGCGCAACAT
GACAGAAAAATGCCCGACACACATCTCCTCACCATTTATCAAACGGAGGATGAGTCGCTGCGTGACTTCGTCGAGAGATTTATGGCAAAGCAAATTAAAGTCCCATACTG
CTCGGATGATGCAACTAGGATGACTTTCACATAG
Protein sequenceShow/hide protein sequence
MMTLGRGSVSLSIKVSNLWLSRITEAPDLRQTLNERIAPQQVGQQTPATPNWGSTPATVGVNSNTIYRPSLATTTATTSTYQATVDVPEVHDSMKEVISKLQNDFEALKQ
SCKADDASWVELGEREDPPFTAPLMAYPLPPKMKKPDMKSYDGSTDPIDHIDLYEGLMELNAAGDEMKCKAFSVTLKGQARSWYRQLKPKTVGSWKQLRKIFISQFLAQH
DRKMPDTHLLTIYQTEDESLRDFVERFMAKQIKVPYCSDDATRMTFT