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Moc03g18960 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g18960
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationchr3:12568110..12569084
RNA-Seq ExpressionMoc03g18960
SyntenyMoc03g18960
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC25221.1 hypothetical protein L484_003434 [Morus notabilis]4.9e-0721.3Show/hide
Query:  ERGFYEAQEPVPEYVRRKLVENGWEALFAPTTGVLEALVKEFYTAINPNRRDVVRGRGKVVKFSPSIINTHYGLLDVFNVISNEILVHPSDEQVEEARRL
        ERGF      +P  +   + + GWE   +        LV+EF+       ++  +  G+V+KF    IN H+G+    +    +      D   +E    
Subjt:  ERGFYEAQEPVPEYVRRKLVENGWEALFAPTTGVLEALVKEFYTAINPNRRDVVRGRGKVVKFSPSIINTHYGLLDVFNVISNEILVHPSDEQVEEARRL

Query:  ICRPHKTWTVSTMGKLSLKPLDINEQATVGIEF-------------------------------NFEELIRNEIRSCSEKMVGPLVFPGLITELCLQAGV
        +C     WT+      + +   +     V   F                               N   +I + +     K +  L +P L+TEL L AGV
Subjt:  ICRPHKTWTVSTMGKLSLKPLDINEQATVGIEF-------------------------------NFEELIRNEIRSCSEKMVGPLVFPGLITELCLQAGV

Query:  AADDANVVIPKKPF--TSLIRVQGYSIVREED---SPITAADPETRGVVTREQYDELRHSTFFPDELAADLPSSSHL
        A  DA++  P + F   S+IR+       E+D     +    P+ +   T  + D       + +++ ADL S S L
Subjt:  AADDANVVIPKKPF--TSLIRVQGYSIVREED---SPITAADPETRGVVTREQYDELRHSTFFPDELAADLPSSSHL

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]1.9e-9161.54Show/hide
Query:  VRLEVRRPTFTTCDIFLERGFYEAQEPVPEYVRRKLVENGWEALFAPTTGVLEALVKEFYTAINPNRRDVVRGRGKVVKFSPSIINTHYGLLDVFNVISN
        VRLEVRRPTFTT DI LERGF EAQEPVPEYVR+++VENGWE LFAP T V EALVKEFYTAINPNR D VR RG                        N
Subjt:  VRLEVRRPTFTTCDIFLERGFYEAQEPVPEYVRRKLVENGWEALFAPTTGVLEALVKEFYTAINPNRRDVVRGRGKVVKFSPSIINTHYGLLDVFNVISN

Query:  EILVHPSDEQVEEARRLICRPHKTWTVSTMGKLSLKPLDINEQATV-------------------------------GIEFNFEELIRNEIRSCSEKMVG
        EILVHPSDEQVEEARRLICRPHKTWT+STMGKLSLKPLDINEQATV                               G+EFNF ELIRNEI+SCSEK+  
Subjt:  EILVHPSDEQVEEARRLICRPHKTWTVSTMGKLSLKPLDINEQATV-------------------------------GIEFNFEELIRNEIRSCSEKMVG

Query:  PLVFPGLITELCLQAGVAADDANVVIPKKPFTSLIRVQGYSIVREEDSPITAADPETRGVVTREQYDELRH-----------------------STFFPD
                      AGV A DANVV+PKKPF SL +V+GYSIVREEDSPITAADPETRGVVTREQYDELRH                       +  FPD
Subjt:  PLVFPGLITELCLQAGVAADDANVVIPKKPFTSLIRVQGYSIVREEDSPITAADPETRGVVTREQYDELRH-----------------------STFFPD

Query:  ELAADLPSSSHLPIDSTDDESSDDE
        ELAADLPSSS LP DS DDESSDDE
Subjt:  ELAADLPSSSHLPIDSTDDESSDDE

XP_022156786.1 uncharacterized protein LOC111023620 [Momordica charantia]5.2e-1763.38Show/hide
Query:  VRLEVRRPTFTTCDIFLERGFYEAQEPVPEYVRRKLVENGWEALFAPTTGVLEALVKEFYTAINPNRRDVV
        VR EV+R  FT  +I +E+GF EAQEPVP+Y++R+L+ENGWE LFAPT  V E LVKEFY  INPNR D +
Subjt:  VRLEVRRPTFTTCDIFLERGFYEAQEPVPEYVRRKLVENGWEALFAPTTGVLEALVKEFYTAINPNRRDVV

XP_022159289.1 uncharacterized protein LOC111025702 [Momordica charantia]4.8e-3158.67Show/hide
Query:  GIEFNFEELIRNEIRSCSEKMVGPLVFPGLITELCLQAGVAADDANVVIPKKPFTSLIRVQGYSIVREEDSPITAADPETRGVVTREQYDE---LRH---
        GIEFNF ELIRNEI  C+EKMVGPL+FP  I ELCL+AGV AD  +VV+ KK  TS+ RV+GY IVREEDSPITAADP+TRGVVTREQYDE   LRH   
Subjt:  GIEFNFEELIRNEIRSCSEKMVGPLVFPGLITELCLQAGVAADDANVVIPKKPFTSLIRVQGYSIVREEDSPITAADPETRGVVTREQYDE---LRH---

Query:  --------------------STFFPDELAADLPSSSHLPIDSTDDESSDD
                            +   PDELAADLPSSS      T D+S  D
Subjt:  --------------------STFFPDELAADLPSSSHLPIDSTDDESSDD

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]7.2e-1127.97Show/hide
Query:  DIFLERGFYEAQEPVPEYVRRKLVENGWEALFAPTTGVLEALVKEFYTAINPNRRDVVRGRGKVVKFSPSIINTHYGLLDVFNVISNEILVHPSDEQVEE
        D+ +E GFY A  P+P+ +   +VE+GW+  +   + ++  +V +FY       RD V  +G+ V FS   IN  Y + D  +   N+I+  P++E +  
Subjt:  DIFLERGFYEAQEPVPEYVRRKLVENGWEALFAPTTGVLEALVKEFYTAINPNRRDVVRGRGKVVKFSPSIINTHYGLLDVFNVISNEILVHPSDEQVEE

Query:  ARRLICRPHKTWTVSTMGKLSLKPLDINEQATVGIEFNFEELI
        A +++ +P   WTVS  G  +L+   +  +  + +    ++LI
Subjt:  ARRLICRPHKTWTVSTMGKLSLKPLDINEQATVGIEFNFEELI

TrEMBL top hitse value%identityAlignment
A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220079.0e-9261.54Show/hide
Query:  VRLEVRRPTFTTCDIFLERGFYEAQEPVPEYVRRKLVENGWEALFAPTTGVLEALVKEFYTAINPNRRDVVRGRGKVVKFSPSIINTHYGLLDVFNVISN
        VRLEVRRPTFTT DI LERGF EAQEPVPEYVR+++VENGWE LFAP T V EALVKEFYTAINPNR D VR RG                        N
Subjt:  VRLEVRRPTFTTCDIFLERGFYEAQEPVPEYVRRKLVENGWEALFAPTTGVLEALVKEFYTAINPNRRDVVRGRGKVVKFSPSIINTHYGLLDVFNVISN

Query:  EILVHPSDEQVEEARRLICRPHKTWTVSTMGKLSLKPLDINEQATV-------------------------------GIEFNFEELIRNEIRSCSEKMVG
        EILVHPSDEQVEEARRLICRPHKTWT+STMGKLSLKPLDINEQATV                               G+EFNF ELIRNEI+SCSEK+  
Subjt:  EILVHPSDEQVEEARRLICRPHKTWTVSTMGKLSLKPLDINEQATV-------------------------------GIEFNFEELIRNEIRSCSEKMVG

Query:  PLVFPGLITELCLQAGVAADDANVVIPKKPFTSLIRVQGYSIVREEDSPITAADPETRGVVTREQYDELRH-----------------------STFFPD
                      AGV A DANVV+PKKPF SL +V+GYSIVREEDSPITAADPETRGVVTREQYDELRH                       +  FPD
Subjt:  PLVFPGLITELCLQAGVAADDANVVIPKKPFTSLIRVQGYSIVREEDSPITAADPETRGVVTREQYDELRH-----------------------STFFPD

Query:  ELAADLPSSSHLPIDSTDDESSDDE
        ELAADLPSSS LP DS DDESSDDE
Subjt:  ELAADLPSSSHLPIDSTDDESSDDE

A0A6J1DW11 uncharacterized protein LOC1110236202.5e-1763.38Show/hide
Query:  VRLEVRRPTFTTCDIFLERGFYEAQEPVPEYVRRKLVENGWEALFAPTTGVLEALVKEFYTAINPNRRDVV
        VR EV+R  FT  +I +E+GF EAQEPVP+Y++R+L+ENGWE LFAPT  V E LVKEFY  INPNR D +
Subjt:  VRLEVRRPTFTTCDIFLERGFYEAQEPVPEYVRRKLVENGWEALFAPTTGVLEALVKEFYTAINPNRRDVV

A0A6J1E204 uncharacterized protein LOC1110257022.3e-3158.67Show/hide
Query:  GIEFNFEELIRNEIRSCSEKMVGPLVFPGLITELCLQAGVAADDANVVIPKKPFTSLIRVQGYSIVREEDSPITAADPETRGVVTREQYDE---LRH---
        GIEFNF ELIRNEI  C+EKMVGPL+FP  I ELCL+AGV AD  +VV+ KK  TS+ RV+GY IVREEDSPITAADP+TRGVVTREQYDE   LRH   
Subjt:  GIEFNFEELIRNEIRSCSEKMVGPLVFPGLITELCLQAGVAADDANVVIPKKPFTSLIRVQGYSIVREEDSPITAADPETRGVVTREQYDE---LRH---

Query:  --------------------STFFPDELAADLPSSSHLPIDSTDDESSDD
                            +   PDELAADLPSSS      T D+S  D
Subjt:  --------------------STFFPDELAADLPSSSHLPIDSTDDESSDD

W9RBS1 Uncharacterized protein3.1e-0723.42Show/hide
Query:  ERGFYEAQEPV---PEYVRRKLVENGWEALFAPTTGVLEALVKEFYTAINPNRRDVVRGRGKVVKFSPSIINTHYGLLDVFNVISN--EILVHPSDEQVE
        E+GF     P    P ++   ++  GW+         +  LVKEFY  +    ++ V      + F+ + IN   G+L + N      E++    +EQ++
Subjt:  ERGFYEAQEPV---PEYVRRKLVENGWEALFAPTTGVLEALVKEFYTAINPNRRDVVRGRGKVVKFSPSIINTHYGLLDVFNVISN--EILVHPSDEQVE

Query:  EARRLICRPHKTWTVSTMGKLSLKPLDINEQATVGIEF-------------------------------NFEELIRNEIRSCSEKMVGPLVFPGLITELC
        E  + I      W +S  G  +    ++   A V   F                               N   LI ++IR+C+EK  G L FP LI+ELC
Subjt:  EARRLICRPHKTWTVSTMGKLSLKPLDINEQATVGIEF-------------------------------NFEELIRNEIRSCSEKMVGPLVFPGLITELC

Query:  LQAGVAADDANVVIPKKPFTSLIRVQGYSIVREEDSPITAADPETRGVVTREQYDELRHSTFFPDELAA
        +Q+ VA + +   +       L+ +   S  R E S         +G    EQ +  R ST   +  +A
Subjt:  LQAGVAADDANVVIPKKPFTSLIRVQGYSIVREEDSPITAADPETRGVVTREQYDELRHSTFFPDELAA

W9SEU9 Uncharacterized protein2.3e-0721.3Show/hide
Query:  ERGFYEAQEPVPEYVRRKLVENGWEALFAPTTGVLEALVKEFYTAINPNRRDVVRGRGKVVKFSPSIINTHYGLLDVFNVISNEILVHPSDEQVEEARRL
        ERGF      +P  +   + + GWE   +        LV+EF+       ++  +  G+V+KF    IN H+G+    +    +      D   +E    
Subjt:  ERGFYEAQEPVPEYVRRKLVENGWEALFAPTTGVLEALVKEFYTAINPNRRDVVRGRGKVVKFSPSIINTHYGLLDVFNVISNEILVHPSDEQVEEARRL

Query:  ICRPHKTWTVSTMGKLSLKPLDINEQATVGIEF-------------------------------NFEELIRNEIRSCSEKMVGPLVFPGLITELCLQAGV
        +C     WT+      + +   +     V   F                               N   +I + +     K +  L +P L+TEL L AGV
Subjt:  ICRPHKTWTVSTMGKLSLKPLDINEQATVGIEF-------------------------------NFEELIRNEIRSCSEKMVGPLVFPGLITELCLQAGV

Query:  AADDANVVIPKKPF--TSLIRVQGYSIVREED---SPITAADPETRGVVTREQYDELRHSTFFPDELAADLPSSSHL
        A  DA++  P + F   S+IR+       E+D     +    P+ +   T  + D       + +++ ADL S S L
Subjt:  AADDANVVIPKKPF--TSLIRVQGYSIVREED---SPITAADPETRGVVTREQYDELRHSTFFPDELAADLPSSSHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGATTAGAGGTGAGGAGGCCCACCTTCACAACATGTGATATTTTCCTTGAGAGAGGCTTTTATGAAGCACAAGAGCCAGTGCCAGAATATGTTAGGAGAAAGCT
TGTGGAGAATGGTTGGGAGGCGTTGTTTGCCCCAACTACAGGTGTATTAGAGGCCTTGGTGAAAGAATTTTACACTGCCATCAACCCAAACCGAAGGGATGTAGTGAGAG
GACGGGGTAAAGTGGTAAAATTCTCACCTTCCATTATTAATACTCACTATGGTTTGTTGGATGTTTTTAATGTCATAAGTAATGAAATTTTGGTGCATCCATCGGACGAG
CAAGTGGAAGAGGCACGTAGGCTTATTTGTAGACCACATAAGACATGGACCGTCTCAACCATGGGGAAGCTTTCCTTGAAGCCCCTTGACATTAATGAGCAAGCGACAGT
TGGCATTGAGTTCAACTTTGAGGAGCTCATAAGGAACGAGATTCGGAGTTGCTCCGAGAAAATGGTAGGTCCTCTTGTTTTTCCTGGACTAATAACTGAGTTATGCTTGC
AGGCGGGAGTGGCGGCCGATGATGCTAATGTTGTGATACCCAAGAAGCCGTTCACATCCCTAATAAGAGTTCAGGGGTATTCCATTGTTCGAGAGGAAGATTCTCCCATT
ACCGCCGCGGATCCCGAGACCCGAGGGGTGGTGACTAGGGAGCAATATGATGAGCTTAGGCACAGTACCTTCTTCCCCGATGAGCTTGCGGCCGATTTACCATCTTCTTC
CCATCTTCCTATCGATTCCACCGACGATGAGTCTTCCGATGATGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGATTAGAGGTGAGGAGGCCCACCTTCACAACATGTGATATTTTCCTTGAGAGAGGCTTTTATGAAGCACAAGAGCCAGTGCCAGAATATGTTAGGAGAAAGCT
TGTGGAGAATGGTTGGGAGGCGTTGTTTGCCCCAACTACAGGTGTATTAGAGGCCTTGGTGAAAGAATTTTACACTGCCATCAACCCAAACCGAAGGGATGTAGTGAGAG
GACGGGGTAAAGTGGTAAAATTCTCACCTTCCATTATTAATACTCACTATGGTTTGTTGGATGTTTTTAATGTCATAAGTAATGAAATTTTGGTGCATCCATCGGACGAG
CAAGTGGAAGAGGCACGTAGGCTTATTTGTAGACCACATAAGACATGGACCGTCTCAACCATGGGGAAGCTTTCCTTGAAGCCCCTTGACATTAATGAGCAAGCGACAGT
TGGCATTGAGTTCAACTTTGAGGAGCTCATAAGGAACGAGATTCGGAGTTGCTCCGAGAAAATGGTAGGTCCTCTTGTTTTTCCTGGACTAATAACTGAGTTATGCTTGC
AGGCGGGAGTGGCGGCCGATGATGCTAATGTTGTGATACCCAAGAAGCCGTTCACATCCCTAATAAGAGTTCAGGGGTATTCCATTGTTCGAGAGGAAGATTCTCCCATT
ACCGCCGCGGATCCCGAGACCCGAGGGGTGGTGACTAGGGAGCAATATGATGAGCTTAGGCACAGTACCTTCTTCCCCGATGAGCTTGCGGCCGATTTACCATCTTCTTC
CCATCTTCCTATCGATTCCACCGACGATGAGTCTTCCGATGATGAATAG
Protein sequenceShow/hide protein sequence
MVRLEVRRPTFTTCDIFLERGFYEAQEPVPEYVRRKLVENGWEALFAPTTGVLEALVKEFYTAINPNRRDVVRGRGKVVKFSPSIINTHYGLLDVFNVISNEILVHPSDE
QVEEARRLICRPHKTWTVSTMGKLSLKPLDINEQATVGIEFNFEELIRNEIRSCSEKMVGPLVFPGLITELCLQAGVAADDANVVIPKKPFTSLIRVQGYSIVREEDSPI
TAADPETRGVVTREQYDELRHSTFFPDELAADLPSSSHLPIDSTDDESSDDE