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Moc03g19140 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g19140
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNase H domain-containing protein
Genome locationchr3:12790096..12794445
RNA-Seq ExpressionMoc03g19140
SyntenyMoc03g19140
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]3.4e-0849.18Show/hide
Query:  VEVESDSLSTIRLIQGDISTLGDELNWIIEIRHLASTFSSINFAYTPRDCNKPVDYLAQWG
        +EVESDSL  I+LI+ +I T GDE NW++EI+ L   F+ I+F+++ R CN+    LA+WG
Subjt:  VEVESDSLSTIRLIQGDISTLGDELNWIIEIRHLASTFSSINFAYTPRDCNKPVDYLAQWG
TrEMBL top hitse value%identityAlignment
A0A5C7IST2 RNase H domain-containing protein9.4e-0440Show/hide
Query:  PVEVESDSLSTIRLIQGDISTLGDELNWIIEIRHLASTFSSINFAYTPRDCNKPVDYLAQ
        P+ +ESDSL+ +RL  G+IST  D  N I +I+ L S     + +Y PR CN+    +A+
Subjt:  PVEVESDSLSTIRLIQGDISTLGDELNWIIEIRHLASTFSSINFAYTPRDCNKPVDYLAQ
A0A6J1DX30 uncharacterized protein LOC1110248741.7e-0849.18Show/hide
Query:  VEVESDSLSTIRLIQGDISTLGDELNWIIEIRHLASTFSSINFAYTPRDCNKPVDYLAQWG
        +EVESDSL  I+LI+ +I T GDE NW++EI+ L   F+ I+F+++ R CN+    LA+WG
Subjt:  VEVESDSLSTIRLIQGDISTLGDELNWIIEIRHLASTFSSINFAYTPRDCNKPVDYLAQWG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGTTTGGTCGGTCCCAAACTCGTGGAGTGTTTTCGACCTTGAGTATAGTGAGTATTCTGTCTGCTCAAGTAACGACTACAAAGGTAATCCCTCTAACCCT
TGGCCTTTTGGGTTGAAACCATCTATACGTTTGAGTTCAAATGGTCAAATGGCTTGTGGCTCGAGTAGTCTAATACGCTTCCCAAGGGAGTTGGGATCGTCTGAG
GATGTTCTAATCGTTCCGCATCTGAGTCCCATTCTAATCGGCTTCAAACTCCATCCGGGATTCTTTCTTGATCCAATTCGGTATCCCGTGGAGGTGGAATCTGAC
TCTCTTTCAACAATTCGTTTGATTCAAGGTGATATCTCAACTCTGGGAGATGAACTGAACTGGATAATTGAAATCAGACACCTTGCATCAACCTTCAGTTCCATC
AATTTTGCTTATACTCCACGAGATTGCAACAAACCAGTGGATTATCTAGCACAATGGGGGTGTCTTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTGTTTGGTCGGTCCCAAACTCGTGGAGTGTTTTCGACCTTGAGTATAGTGAGTATTCTGTCTGCTCAAGTAACGACTACAAAGGTAATCCCTCTAACCCT
TGGCCTTTTGGGTTGAAACCATCTATACGTTTGAGTTCAAATGGTCAAATGGCTTGTGGCTCGAGTAGTCTAATACGCTTCCCAAGGGAGTTGGGATCGTCTGAG
GATGTTCTAATCGTTCCGCATCTGAGTCCCATTCTAATCGGCTTCAAACTCCATCCGGGATTCTTTCTTGATCCAATTCGGTATCCCGTGGAGGTGGAATCTGAC
TCTCTTTCAACAATTCGTTTGATTCAAGGTGATATCTCAACTCTGGGAGATGAACTGAACTGGATAATTGAAATCAGACACCTTGCATCAACCTTCAGTTCCATC
AATTTTGCTTATACTCCACGAGATTGCAACAAACCAGTGGATTATCTAGCACAATGGGGGTGTCTTCTTTAG
Protein sequenceShow/hide protein sequence
MLVWSVPNSWSVFDLEYSEYSVCSSNDYKGNPSNPWPFGLKPSIRLSSNGQMACGSSSLIRFPRELGSSEDVLIVPHLSPILIGFKLHPGFFLDPIRYPVEVESD
SLSTIRLIQGDISTLGDELNWIIEIRHLASTFSSINFAYTPRDCNKPVDYLAQWGCLL