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Moc03g19700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g19700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotransposon protein, putative, Ty1-copia subclass
Genome locationchr3:13277675..13278144
RNA-Seq ExpressionMoc03g19700
SyntenyMoc03g19700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]1.1e-1154.93Show/hide
Query:  FLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSGHTYKQSGSDGALKDGLYQLGSPGV
        F++TQ    F A+P+ VVDP WY+DSGA+NHVT + SNM NP+EYSG  Y ++   G L+DG YQL   GV
Subjt:  FLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSGHTYKQSGSDGALKDGLYQLGSPGV

KAA0036141.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]9.2e-0841.41Show/hide
Query:  AFLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSG------------HTYKQSGSD---------------GALKDGLYQLGSPGV
        AF+ T   N+F+ +PE V+D  WYVD+GA+NHVTADYSN+ NP +YSG            + Y +   D               G LKDGLY L S  V
Subjt:  AFLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSG------------HTYKQSGSD---------------GALKDGLYQLGSPGV

TYJ96311.1 uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa]1.1e-1154.93Show/hide
Query:  FLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSGHTYKQSGSDGALKDGLYQLGSPGV
        F++TQ    F A+P+ VVDP WY+DSGA+NHVT + SNM NP+EYSG  Y ++   G L+DG YQL   GV
Subjt:  FLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSGHTYKQSGSDGALKDGLYQLGSPGV

XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]6.0e-0761.7Show/hide
Query:  FLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSG
        F++TQ    F A+P+ VVDP WY+DSGA+NHVT + SNM NP+EYSG
Subjt:  FLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSG

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]1.1e-1154.93Show/hide
Query:  FLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSGHTYKQSGSDGALKDGLYQLGSPGV
        F++TQ    F A+P+ VVDP WY+DSGA+NHVT + SNM NP+EYSG  Y ++   G L+DG YQL   GV
Subjt:  FLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSGHTYKQSGSDGALKDGLYQLGSPGV

TrEMBL top hitse value%identityAlignment
A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X12.9e-0761.7Show/hide
Query:  FLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSG
        F++TQ    F A+P+ VVDP WY+DSGA+NHVT + SNM NP+EYSG
Subjt:  FLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSG

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X35.1e-1254.93Show/hide
Query:  FLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSGHTYKQSGSDGALKDGLYQLGSPGV
        F++TQ    F A+P+ VVDP WY+DSGA+NHVT + SNM NP+EYSG  Y ++   G L+DG YQL   GV
Subjt:  FLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSGHTYKQSGSDGALKDGLYQLGSPGV

A0A5A7SIT7 Uncharacterized protein5.1e-1254.93Show/hide
Query:  FLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSGHTYKQSGSDGALKDGLYQLGSPGV
        F++TQ    F A+P+ VVDP WY+DSGA+NHVT + SNM NP+EYSG  Y ++   G L+DG YQL   GV
Subjt:  FLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSGHTYKQSGSDGALKDGLYQLGSPGV

A0A5D3BCH9 Uncharacterized protein5.1e-1254.93Show/hide
Query:  FLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSGHTYKQSGSDGALKDGLYQLGSPGV
        F++TQ    F A+P+ VVDP WY+DSGA+NHVT + SNM NP+EYSG  Y ++   G L+DG YQL   GV
Subjt:  FLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSGHTYKQSGSDGALKDGLYQLGSPGV

A0A5D3CPY2 Retrotransposon protein, putative, Ty1-copia subclass4.5e-0841.41Show/hide
Query:  AFLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSG------------HTYKQSGSD---------------GALKDGLYQLGSPGV
        AF+ T   N+F+ +PE V+D  WYVD+GA+NHVTADYSN+ NP +YSG            + Y +   D               G LKDGLY L S  V
Subjt:  AFLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSG------------HTYKQSGSD---------------GALKDGLYQLGSPGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCAATTGCTCCAATGGCCACTCAAGCTTTCCTAGCCACACAAAAACCAAATACCTTTATTGCAAGCCCTGAACCAGTGGTTGACCCAACTTGGTATGTTGATAG
TGGAGCATCAAATCATGTTACAGCAGATTATAGTAATATGGTTAATCCCTCTGAATATAGTGGACACACGTACAAGCAAAGTGGTTCTGACGGGGCTCTTAAAGATGGAC
TCTATCAGCTCGGTTCACCAGGTGTCACTGGAATGTCTATTAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGCAATTGCTCCAATGGCCACTCAAGCTTTCCTAGCCACACAAAAACCAAATACCTTTATTGCAAGCCCTGAACCAGTGGTTGACCCAACTTGGTATGTTGATAG
TGGAGCATCAAATCATGTTACAGCAGATTATAGTAATATGGTTAATCCCTCTGAATATAGTGGACACACGTACAAGCAAAGTGGTTCTGACGGGGCTCTTAAAGATGGAC
TCTATCAGCTCGGTTCACCAGGTGTCACTGGAATGTCTATTAAATAG
Protein sequenceShow/hide protein sequence
MTAIAPMATQAFLATQKPNTFIASPEPVVDPTWYVDSGASNHVTADYSNMVNPSEYSGHTYKQSGSDGALKDGLYQLGSPGVTGMSIK