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Moc03g19730 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g19730
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Genome locationchr3:13298214..13300511
RNA-Seq ExpressionMoc03g19730
SyntenyMoc03g19730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153201.1 uncharacterized protein LOC111020757 [Momordica charantia]4.4e-3742.65Show/hide
Query:  AFRSCSNYTPAGIPLLPSRLFKWSCTYSRRFRMLASEVFDNTRA-------------QHMDHIMLPSEARVIPDPP------VVPDPPANVGGGTQERRV
        A+ + S  +   IP    RL +WSC YS  FR+L SEVFDNTR+             QHM  ++LP E RVIPDPP      VVPDPPA+          
Subjt:  AFRSCSNYTPAGIPLLPSRLFKWSCTYSRRFRMLASEVFDNTRA-------------QHMDHIMLPSEARVIPDPP------VVPDPPANVGGGTQERRV

Query:  KDKGEKIIEDSVEEAPALDDVGPSGNDGQAPENRSERKKFKKRISRRLKRLDDRVGVIEATLGGIGVALKGIQRVNSQIQANILDE--------GGPDGD
         D     +ED V +A A+D+  PS NDG+  E R ++ KFKKRISRRLKRLD+ VG IE  LG  GVALKGIQ    ++      +        GGPD D
Subjt:  KDKGEKIIEDSVEEAPALDDVGPSGNDGQAPENRSERKKFKKRISRRLKRLDDRVGVIEATLGGIGVALKGIQRVNSQIQANILDE--------GGPDGD

Query:  DPVNQRPVKAPKPAGGSKSMDEDWRPKEDPKRDGGTKSMDEDWRLDEALKRAGGSKSMDEDPKTEEEPTMEH
         P +QRP ++PKP GG KSMDED R  ED +                           DED +TE+EPT  H
Subjt:  DPVNQRPVKAPKPAGGSKSMDEDWRPKEDPKRDGGTKSMDEDWRLDEALKRAGGSKSMDEDPKTEEEPTMEH

XP_022154965.1 uncharacterized protein LOC111022110 [Momordica charantia]3.8e-1232.68Show/hide
Query:  RLFKWSCTYSRRFRMLASEVFDNTRA-------------QHMDHIMLPSEARVIPDPP--VVPDPPANVGGGTQERRVKDKGEKI-IEDSVEEAPAL---
        RL +WSCTYSR F +L  EVF+N ++             QHM  +M P  A V P  P  +  +P A      +     + G+ + ++D  ++A  L   
Subjt:  RLFKWSCTYSRRFRMLASEVFDNTRA-------------QHMDHIMLPSEARVIPDPP--VVPDPPANVGGGTQERRVKDKGEKI-IEDSVEEAPAL---

Query:  ---DDVGPSGNDGQ-APENRSE--RKKFKKRISRRLKRLDDRVGVIEATLGGIGVALKGIQRVNSQIQANILDEGGPDGDDPVNQRPVKAPKPAGGSKSM
           D +G  G   Q  P+  +E  +KK K + SR L+RL DRV  IE TL G+   +K I++   ++   ++ +G    D     R    P   G S   
Subjt:  ---DDVGPSGNDGQ-APENRSE--RKKFKKRISRRLKRLDDRVGVIEATLGGIGVALKGIQRVNSQIQANILDEGGPDGDDPVNQRPVKAPKPAGGSKSM

Query:  DEDWRPKEDPKRDGGTKSMDEDWRLDEALKRAGGSKSMDEDPKTEEEPTMEHDS
        D   R +ED         MDED +  +  K  G    MDEDPKT EEPT  H+S
Subjt:  DEDWRPKEDPKRDGGTKSMDEDWRLDEALKRAGGSKSMDEDPKTEEEPTMEHDS

XP_022155163.1 uncharacterized protein LOC111022304 [Momordica charantia]8.2e-1544.29Show/hide
Query:  RLFKWSCTYSRRFRMLASEVFDNT-------------RAQHMDHIMLPSEARVI------------PDPPVVPDP------------------PANVGGG
        RLF+WSCTYSR F  +  +VFDNT               +HM  IM P EAR I            PDPP VPDP                  PA++  G
Subjt:  RLFKWSCTYSRRFRMLASEVFDNT-------------RAQHMDHIMLPSEARVI------------PDPPVVPDP------------------PANVGGG

Query:  TQERRVKDKGEKIIEDSVEEA----------PALDDVGPS
        TQERRVKDKG+ IIED VEEA          PALDD GPS
Subjt:  TQERRVKDKGEKIIEDSVEEA----------PALDDVGPS

XP_022155476.1 uncharacterized protein LOC111022607 [Momordica charantia]2.8e-0741.22Show/hide
Query:  GSKSMDEDWRPKEDPKRDGGTKSMDEDWRLDEALKRAGGSKSMDEDPKTE-------EEPTMEHDSRMAEQRIMQMTMYLGWAQELDVPSDTPLTRGRVR
        G  S+DED  PK   +RD     M+ED          G     DEDP  +       +   ++H      Q  +   + +G  QE D   DT  TR RVR
Subjt:  GSKSMDEDWRPKEDPKRDGGTKSMDEDWRLDEALKRAGGSKSMDEDPKTE-------EEPTMEHDSRMAEQRIMQMTMYLGWAQELDVPSDTPLTRGRVR

Query:  RPYKDWTPDAIVKVEPDLKQDQFDLQQAPIG
        RPYKDW PDAIVKVEP L QD+ DLQ AP G
Subjt:  RPYKDWTPDAIVKVEPDLKQDQFDLQQAPIG

XP_022156879.1 putative F-box protein At4g17565 [Momordica charantia]5.9e-0555.56Show/hide
Query:  RLFKWSCTYSRRFRMLASEVFDNTRA-------------QHMDHIMLPSEARVI
        RL +WSCTYSR FR+LAS+VFDNTR+             QHMD IMLP EA ++
Subjt:  RLFKWSCTYSRRFRMLASEVFDNTRA-------------QHMDHIMLPSEARVI

TrEMBL top hitse value%identityAlignment
A0A6J1DJX9 uncharacterized protein LOC1110207572.2e-3742.65Show/hide
Query:  AFRSCSNYTPAGIPLLPSRLFKWSCTYSRRFRMLASEVFDNTRA-------------QHMDHIMLPSEARVIPDPP------VVPDPPANVGGGTQERRV
        A+ + S  +   IP    RL +WSC YS  FR+L SEVFDNTR+             QHM  ++LP E RVIPDPP      VVPDPPA+          
Subjt:  AFRSCSNYTPAGIPLLPSRLFKWSCTYSRRFRMLASEVFDNTRA-------------QHMDHIMLPSEARVIPDPP------VVPDPPANVGGGTQERRV

Query:  KDKGEKIIEDSVEEAPALDDVGPSGNDGQAPENRSERKKFKKRISRRLKRLDDRVGVIEATLGGIGVALKGIQRVNSQIQANILDE--------GGPDGD
         D     +ED V +A A+D+  PS NDG+  E R ++ KFKKRISRRLKRLD+ VG IE  LG  GVALKGIQ    ++      +        GGPD D
Subjt:  KDKGEKIIEDSVEEAPALDDVGPSGNDGQAPENRSERKKFKKRISRRLKRLDDRVGVIEATLGGIGVALKGIQRVNSQIQANILDE--------GGPDGD

Query:  DPVNQRPVKAPKPAGGSKSMDEDWRPKEDPKRDGGTKSMDEDWRLDEALKRAGGSKSMDEDPKTEEEPTMEH
         P +QRP ++PKP GG KSMDED R  ED +                           DED +TE+EPT  H
Subjt:  DPVNQRPVKAPKPAGGSKSMDEDWRPKEDPKRDGGTKSMDEDWRLDEALKRAGGSKSMDEDPKTEEEPTMEH

A0A6J1DL40 uncharacterized protein LOC1110221101.8e-1232.68Show/hide
Query:  RLFKWSCTYSRRFRMLASEVFDNTRA-------------QHMDHIMLPSEARVIPDPP--VVPDPPANVGGGTQERRVKDKGEKI-IEDSVEEAPAL---
        RL +WSCTYSR F +L  EVF+N ++             QHM  +M P  A V P  P  +  +P A      +     + G+ + ++D  ++A  L   
Subjt:  RLFKWSCTYSRRFRMLASEVFDNTRA-------------QHMDHIMLPSEARVIPDPP--VVPDPPANVGGGTQERRVKDKGEKI-IEDSVEEAPAL---

Query:  ---DDVGPSGNDGQ-APENRSE--RKKFKKRISRRLKRLDDRVGVIEATLGGIGVALKGIQRVNSQIQANILDEGGPDGDDPVNQRPVKAPKPAGGSKSM
           D +G  G   Q  P+  +E  +KK K + SR L+RL DRV  IE TL G+   +K I++   ++   ++ +G    D     R    P   G S   
Subjt:  ---DDVGPSGNDGQ-APENRSE--RKKFKKRISRRLKRLDDRVGVIEATLGGIGVALKGIQRVNSQIQANILDEGGPDGDDPVNQRPVKAPKPAGGSKSM

Query:  DEDWRPKEDPKRDGGTKSMDEDWRLDEALKRAGGSKSMDEDPKTEEEPTMEHDS
        D   R +ED         MDED +  +  K  G    MDEDPKT EEPT  H+S
Subjt:  DEDWRPKEDPKRDGGTKSMDEDWRLDEALKRAGGSKSMDEDPKTEEEPTMEHDS

A0A6J1DM86 uncharacterized protein LOC1110223044.0e-1544.29Show/hide
Query:  RLFKWSCTYSRRFRMLASEVFDNT-------------RAQHMDHIMLPSEARVI------------PDPPVVPDP------------------PANVGGG
        RLF+WSCTYSR F  +  +VFDNT               +HM  IM P EAR I            PDPP VPDP                  PA++  G
Subjt:  RLFKWSCTYSRRFRMLASEVFDNT-------------RAQHMDHIMLPSEARVI------------PDPPVVPDP------------------PANVGGG

Query:  TQERRVKDKGEKIIEDSVEEA----------PALDDVGPS
        TQERRVKDKG+ IIED VEEA          PALDD GPS
Subjt:  TQERRVKDKGEKIIEDSVEEA----------PALDDVGPS

A0A6J1DRS0 uncharacterized protein LOC1110226071.4e-0741.22Show/hide
Query:  GSKSMDEDWRPKEDPKRDGGTKSMDEDWRLDEALKRAGGSKSMDEDPKTE-------EEPTMEHDSRMAEQRIMQMTMYLGWAQELDVPSDTPLTRGRVR
        G  S+DED  PK   +RD     M+ED          G     DEDP  +       +   ++H      Q  +   + +G  QE D   DT  TR RVR
Subjt:  GSKSMDEDWRPKEDPKRDGGTKSMDEDWRLDEALKRAGGSKSMDEDPKTE-------EEPTMEHDSRMAEQRIMQMTMYLGWAQELDVPSDTPLTRGRVR

Query:  RPYKDWTPDAIVKVEPDLKQDQFDLQQAPIG
        RPYKDW PDAIVKVEP L QD+ DLQ AP G
Subjt:  RPYKDWTPDAIVKVEPDLKQDQFDLQQAPIG

A0A6J1DUW8 putative F-box protein At4g175652.8e-0555.56Show/hide
Query:  RLFKWSCTYSRRFRMLASEVFDNTRA-------------QHMDHIMLPSEARVI
        RL +WSCTYSR FR+LAS+VFDNTR+             QHMD IMLP EA ++
Subjt:  RLFKWSCTYSRRFRMLASEVFDNTRA-------------QHMDHIMLPSEARVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCGCATTTCGTTCTCACTCGCATTTCGCTCTCGGGAGTGAACTCGCTCCCTTGCTCTCGCTTGCATCTTGCTATCGTTACATTTCGCTGTCATCACATTTCGCT
CTTGCTTGCATTTCGCTCTTGTTCGAATTACACTCCTGCTGGCATTCCGCTCTTGCCCTCTCGCTTATTCAAGTGGTCGTGCACTTATTCTCGCAGGTTCCGTATGCTGG
CGAGTGAGGTGTTTGATAACACGCGGGCACAACACATGGACCATATCATGCTTCCATCAGAAGCCCGCGTTATACCTGATCCGCCTGTCGTACCTGATCCGCCTGCAAAT
GTAGGGGGTGGTACTCAGGAAAGGAGAGTGAAGGACAAAGGGGAGAAGATCATAGAGGATTCGGTAGAAGAGGCCCCTGCATTAGATGATGTTGGACCCAGTGGAAATGA
CGGTCAAGCACCAGAGAATAGGTCGGAGAGGAAGAAATTCAAGAAAAGGATCAGTAGACGGTTGAAGAGGCTCGATGACCGTGTGGGTGTTATCGAGGCCACACTGGGTG
GCATTGGAGTCGCCCTAAAAGGTATTCAGAGGGTAAATTCCCAGATCCAAGCAAATATTTTGGATGAGGGAGGGCCCGATGGTGATGATCCAGTGAATCAAAGGCCTGTT
AAGGCCCCGAAGCCAGCTGGAGGTTCGAAGAGTATGGACGAGGACTGGAGGCCTAAGGAGGACCCCAAGCGAGATGGAGGTACAAAGAGTATGGACGAGGATTGGAGGCT
TGATGAGGCCCTAAAGCGAGCTGGAGGTTCGAAGAGTATGGACGAGGACCCGAAGACTGAGGAGGAACCAACTATGGAGCATGACAGCCGGATGGCTGAGCAACGGATCA
TGCAAATGACCATGTATCTCGGGTGGGCGCAAGAGCTGGATGTTCCATCAGATACGCCACTCACAAGGGGACGCGTTAGGCGTCCCTATAAGGATTGGACACCAGACGCG
ATCGTTAAGGTTGAACCTGACCTGAAGCAAGACCAATTTGACCTTCAACAGGCCCCAATTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCGCATTTCGTTCTCACTCGCATTTCGCTCTCGGGAGTGAACTCGCTCCCTTGCTCTCGCTTGCATCTTGCTATCGTTACATTTCGCTGTCATCACATTTCGCT
CTTGCTTGCATTTCGCTCTTGTTCGAATTACACTCCTGCTGGCATTCCGCTCTTGCCCTCTCGCTTATTCAAGTGGTCGTGCACTTATTCTCGCAGGTTCCGTATGCTGG
CGAGTGAGGTGTTTGATAACACGCGGGCACAACACATGGACCATATCATGCTTCCATCAGAAGCCCGCGTTATACCTGATCCGCCTGTCGTACCTGATCCGCCTGCAAAT
GTAGGGGGTGGTACTCAGGAAAGGAGAGTGAAGGACAAAGGGGAGAAGATCATAGAGGATTCGGTAGAAGAGGCCCCTGCATTAGATGATGTTGGACCCAGTGGAAATGA
CGGTCAAGCACCAGAGAATAGGTCGGAGAGGAAGAAATTCAAGAAAAGGATCAGTAGACGGTTGAAGAGGCTCGATGACCGTGTGGGTGTTATCGAGGCCACACTGGGTG
GCATTGGAGTCGCCCTAAAAGGTATTCAGAGGGTAAATTCCCAGATCCAAGCAAATATTTTGGATGAGGGAGGGCCCGATGGTGATGATCCAGTGAATCAAAGGCCTGTT
AAGGCCCCGAAGCCAGCTGGAGGTTCGAAGAGTATGGACGAGGACTGGAGGCCTAAGGAGGACCCCAAGCGAGATGGAGGTACAAAGAGTATGGACGAGGATTGGAGGCT
TGATGAGGCCCTAAAGCGAGCTGGAGGTTCGAAGAGTATGGACGAGGACCCGAAGACTGAGGAGGAACCAACTATGGAGCATGACAGCCGGATGGCTGAGCAACGGATCA
TGCAAATGACCATGTATCTCGGGTGGGCGCAAGAGCTGGATGTTCCATCAGATACGCCACTCACAAGGGGACGCGTTAGGCGTCCCTATAAGGATTGGACACCAGACGCG
ATCGTTAAGGTTGAACCTGACCTGAAGCAAGACCAATTTGACCTTCAACAGGCCCCAATTGGTTAG
Protein sequenceShow/hide protein sequence
MSSHFVLTRISLSGVNSLPCSRLHLAIVTFRCHHISLLLAFRSCSNYTPAGIPLLPSRLFKWSCTYSRRFRMLASEVFDNTRAQHMDHIMLPSEARVIPDPPVVPDPPAN
VGGGTQERRVKDKGEKIIEDSVEEAPALDDVGPSGNDGQAPENRSERKKFKKRISRRLKRLDDRVGVIEATLGGIGVALKGIQRVNSQIQANILDEGGPDGDDPVNQRPV
KAPKPAGGSKSMDEDWRPKEDPKRDGGTKSMDEDWRLDEALKRAGGSKSMDEDPKTEEEPTMEHDSRMAEQRIMQMTMYLGWAQELDVPSDTPLTRGRVRRPYKDWTPDA
IVKVEPDLKQDQFDLQQAPIG