CuGenDBv2

Gene ID	Moc03g19760
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Genome location	chr3:13317015..13326312
RNA-Seq Expression	Moc03g19760
Synteny	Moc03g19760
Gene Ontology terms	GO:0097159 - organic cyclic compound binding (molecular function) GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

CAN60331.1 hypothetical protein VITISV_024553 [Vitis vinifera]

4.4e-39

34.44

Show/hide

Query:  KFDGANFRYWKMQIKDYLTCKMLNI-ALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM
        KFDG +F YW+MQI+DYL  + L++  L  +P  +K E+W   ++Q +  IRL+L  +VA  V  E    DLMKAL   YEK SANNKV+L+++ FN++M
Subjt:  KFDGANFRYWKMQIKDYLTCKMLNI-ALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM

Query:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKK---------RSEKESTSEKTQHW
         EN S+  ++NE   + NQL+SV+I F D++  +++L SL  S   M+  +SNS G +  K++   D   AEEIC++         +S K+   + + + 
Subjt:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKK---------RSEKESTSEKTQHW

Query:  LSKKVKRRLHLMKDSRNIVGGIGREMLIVFTAIKKSHIKKNCIILKEDLKRYMTESNAVVDDALVCVESNTKTGN-------QYVPSIRMNLILIGKLDD
        ++++V+  L L  DS   +     +    F       I +N  +  +  K Y+ + +A+    L  V  +   G+       +++P +R NLI IG+LDD
Subjt:  LSKKVKRRLHLMKDSRNIVGGIGREMLIVFTAIKKSHIKKNCIILKEDLKRYMTESNAVVDDALVCVESNTKTGN-------QYVPSIRMNLILIGKLDD

Query:  DDYQSEFGGNQWKVTKGSKLVAIGHRRSTVY
        + +   F G  WKVTKG++++A G +  T+Y
Subjt:  DDYQSEFGGNQWKVTKGSKLVAIGHRRSTVY

CAN69998.1 hypothetical protein VITISV_006839 [Vitis vinifera]

9.8e-39

34.35

Show/hide

Query:  KFDGANFRYWKMQIKDYLTCKMLNI-ALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM
        KFDG NF YW+MQI+DYL  + L++  L  +P  +K E+W   ++Q +  IRL+L  +VA  V  E    DLMKAL   YEK SANNKV+L+++ FN++M
Subjt:  KFDGANFRYWKMQIKDYLTCKMLNI-ALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM

Query:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKKRSEKESTSEKTQHWLSKKVKRR-
         EN S+  ++NE   + NQL+S++I F  ++  +++L SL  S E M+  +SNS G + LK++   D   AEEI ++ + + S S      L+ + + R 
Subjt:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKKRSEKESTSEKTQHWLSKKVKRR-

Query:  ---------LHLMKDSRNIVGGIGREMLIVFTAIKKSHIKKNCIILK----EDLKRYMTESNAVVDDALVCVESNTKTGNQYVPSIRMNLILIGKLDDDD
                  +    +RN       + +  +   K  H K+ C   K    +D    +TE  ++ + ++  +E       +++P +R NLI IG+LDD+ 
Subjt:  ---------LHLMKDSRNIVGGIGREMLIVFTAIKKSHIKKNCIILK----EDLKRYMTESNAVVDDALVCVESNTKTGNQYVPSIRMNLILIGKLDDDD

Query:  YQSEFGGNQWKVTKGSKLVAIGHRRSTVY
        +   F G  WKVTKG +++A G +  T+Y
Subjt:  YQSEFGGNQWKVTKGSKLVAIGHRRSTVY

RVW14934.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]

3.4e-39

33.91

Show/hide

Query:  KFDGANFRYWKMQIKDYLTCKMLNI-ALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM
        KFDG +F YW+MQI+DYL  + L++  L  +P  +K E+W   ++Q +  IRL+L  +VA  + NE    DLMKAL   YEKSSANNKV+L+++ FN++M
Subjt:  KFDGANFRYWKMQIKDYLTCKMLNI-ALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM

Query:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKKRSEKESTSEKTQHWLSKKVKRRL
         EN S+  ++NE   + NQL+SV+I F D++  +++L SL  S E M+ T+SNS G + LK++   D   AEEI ++ + + S S      L+ +++ + 
Subjt:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKKRSEKESTSEKTQHWLSKKVKRRL

Query:  HLMK-----------DSRNIVGGIGREMLI----------VFTAIKKSHIKKNCIILK-----EDLKRYMTESNAVVDDALVCVESNTKTGN-------Q
        H  +           D  N+V    ++ L+          V  +    H   +  I++     E  K Y+ + +A+    L  V  +   G+       +
Subjt:  HLMK-----------DSRNIVGGIGREMLI----------VFTAIKKSHIKKNCIILK-----EDLKRYMTESNAVVDDALVCVESNTKTGN-------Q

Query:  YVPSIRMNLILIGKLDDDDYQSEFGGNQWKVTKGSKLVAIGHRRSTVY
        ++P +R NLI +G+LDD+ +   F G  WKVTKG++++A G +  T+Y
Subjt:  YVPSIRMNLILIGKLDDDDYQSEFGGNQWKVTKGSKLVAIGHRRSTVY

RVW62803.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]

3.4e-39

33.79

Show/hide

Query:  KFDGANFRYWKMQIKDYLTCKMLNIA-LKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM
        KFDG +F YW+MQI+DYL  + L++  L  +P  +K E+W   ++Q +  IRL+L  +VA  V  E    DLMKAL + YEK SANNKV+L+++ FN++M
Subjt:  KFDGANFRYWKMQIKDYLTCKMLNIA-LKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM

Query:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKKRSEKESTS-EKTQHWLSKKV---
         EN S+  ++NE   + NQL+SV+I F D++  +++L SL  S E M+  +SNS G + LK++   D   AEEI +KR   +S S ++ Q W   K    
Subjt:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKKRSEKESTS-EKTQHWLSKKV---

Query:  KRRLHLMK-----DSRNIVGGIGREMLIV----------------FTAIKKSHIKKNCIILKEDLKRYMTESNAVVDDALVCVESNTKTGN-------QY
        KR+    K     DS N V    ++ L++                F       I +N  +  +  K Y+ + +A+    L  V  +   G+       ++
Subjt:  KRRLHLMK-----DSRNIVGGIGREMLIV----------------FTAIKKSHIKKNCIILKEDLKRYMTESNAVVDDALVCVESNTKTGN-------QY

Query:  VPSIRMNLILIGKLDDDDYQSEFGGNQWKVTKGSKLVAIGHRRSTVYTSQLSVARRSLKQRIRIGEL
        +P +R NLI +G+LDD+ +   F G  WKVTKG++++A G +  T+         + L  + ++ EL
Subjt:  VPSIRMNLILIGKLDDDDYQSEFGGNQWKVTKGSKLVAIGHRRSTVYTSQLSVARRSLKQRIRIGEL

RVW77419.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]

5.7e-39

34.97

Show/hide

Query:  KFDGANFRYWKMQIKDYLTCKMLNI-ALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM
        KFDG +F YW+MQI+DYL  + L++  L  +P  +K E+W   ++Q +  IRL+L  +VA  V  E    DLMKAL   YEK SANNKV+L+++ FN++M
Subjt:  KFDGANFRYWKMQIKDYLTCKMLNI-ALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM

Query:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKKRSEKESTSEKTQHWLSK-KVKRR
         EN S+  ++NE   + NQL+SV+I F D++  +++L SL  S E M+  +SNS G + LK++   D   +EEI ++R E  S S  +    SK +  ++
Subjt:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKKRSEKESTSEKTQHWLSK-KVKRR

Query:  LHLMKDSRNIVGGIGREML---IVFTAIKKSHIKKNCIILKEDLKRYMTESNAVVDDALVCVESNTKTGN-------QYVPSIRMNLILIGKLDDDDYQS
        +      + +   +   +L     F       I +N  +  +  K Y+ + +A+    L  V  +   G+       +++P +R NLI IG+LDD+ +  
Subjt:  LHLMKDSRNIVGGIGREML---IVFTAIKKSHIKKNCIILKEDLKRYMTESNAVVDDALVCVESNTKTGN-------QYVPSIRMNLILIGKLDDDDYQS

Query:  EFGGNQWKVTKGSKLVAIGHRRSTVY
         F G  WKVTKG++++A G +  T+Y
Subjt:  EFGGNQWKVTKGSKLVAIGHRRSTVY

TrEMBL top hits

e value

%identity

Alignment

A0A438BVC7 Retrovirus-related Pol polyprotein from transposon TNT 1-94

1.6e-39

33.91

Show/hide

Query:  KFDGANFRYWKMQIKDYLTCKMLNI-ALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM
        KFDG +F YW+MQI+DYL  + L++  L  +P  +K E+W   ++Q +  IRL+L  +VA  + NE    DLMKAL   YEKSSANNKV+L+++ FN++M
Subjt:  KFDGANFRYWKMQIKDYLTCKMLNI-ALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM

Query:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKKRSEKESTSEKTQHWLSKKVKRRL
         EN S+  ++NE   + NQL+SV+I F D++  +++L SL  S E M+ T+SNS G + LK++   D   AEEI ++ + + S S      L+ +++ + 
Subjt:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKKRSEKESTSEKTQHWLSKKVKRRL

Query:  HLMK-----------DSRNIVGGIGREMLI----------VFTAIKKSHIKKNCIILK-----EDLKRYMTESNAVVDDALVCVESNTKTGN-------Q
        H  +           D  N+V    ++ L+          V  +    H   +  I++     E  K Y+ + +A+    L  V  +   G+       +
Subjt:  HLMK-----------DSRNIVGGIGREMLI----------VFTAIKKSHIKKNCIILK-----EDLKRYMTESNAVVDDALVCVESNTKTGN-------Q

Query:  YVPSIRMNLILIGKLDDDDYQSEFGGNQWKVTKGSKLVAIGHRRSTVY
        ++P +R NLI +G+LDD+ +   F G  WKVTKG++++A G +  T+Y
Subjt:  YVPSIRMNLILIGKLDDDDYQSEFGGNQWKVTKGSKLVAIGHRRSTVY

A0A438FS76 Retrovirus-related Pol polyprotein from transposon TNT 1-94

1.6e-39

33.79

Show/hide

Query:  KFDGANFRYWKMQIKDYLTCKMLNIA-LKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM
        KFDG +F YW+MQI+DYL  + L++  L  +P  +K E+W   ++Q +  IRL+L  +VA  V  E    DLMKAL + YEK SANNKV+L+++ FN++M
Subjt:  KFDGANFRYWKMQIKDYLTCKMLNIA-LKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM

Query:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKKRSEKESTS-EKTQHWLSKKV---
         EN S+  ++NE   + NQL+SV+I F D++  +++L SL  S E M+  +SNS G + LK++   D   AEEI +KR   +S S ++ Q W   K    
Subjt:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKKRSEKESTS-EKTQHWLSKKV---

Query:  KRRLHLMK-----DSRNIVGGIGREMLIV----------------FTAIKKSHIKKNCIILKEDLKRYMTESNAVVDDALVCVESNTKTGN-------QY
        KR+    K     DS N V    ++ L++                F       I +N  +  +  K Y+ + +A+    L  V  +   G+       ++
Subjt:  KRRLHLMK-----DSRNIVGGIGREMLIV----------------FTAIKKSHIKKNCIILKEDLKRYMTESNAVVDDALVCVESNTKTGN-------QY

Query:  VPSIRMNLILIGKLDDDDYQSEFGGNQWKVTKGSKLVAIGHRRSTVYTSQLSVARRSLKQRIRIGEL
        +P +R NLI +G+LDD+ +   F G  WKVTKG++++A G +  T+         + L  + ++ EL
Subjt:  VPSIRMNLILIGKLDDDDYQSEFGGNQWKVTKGSKLVAIGHRRSTVYTSQLSVARRSLKQRIRIGEL

A0A438GYZ2 Retrovirus-related Pol polyprotein from transposon TNT 1-94

2.8e-39

34.97

Show/hide

Query:  KFDGANFRYWKMQIKDYLTCKMLNI-ALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM
        KFDG +F YW+MQI+DYL  + L++  L  +P  +K E+W   ++Q +  IRL+L  +VA  V  E    DLMKAL   YEK SANNKV+L+++ FN++M
Subjt:  KFDGANFRYWKMQIKDYLTCKMLNI-ALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM

Query:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKKRSEKESTSEKTQHWLSK-KVKRR
         EN S+  ++NE   + NQL+SV+I F D++  +++L SL  S E M+  +SNS G + LK++   D   +EEI ++R E  S S  +    SK +  ++
Subjt:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKKRSEKESTSEKTQHWLSK-KVKRR

Query:  LHLMKDSRNIVGGIGREML---IVFTAIKKSHIKKNCIILKEDLKRYMTESNAVVDDALVCVESNTKTGN-------QYVPSIRMNLILIGKLDDDDYQS
        +      + +   +   +L     F       I +N  +  +  K Y+ + +A+    L  V  +   G+       +++P +R NLI IG+LDD+ +  
Subjt:  LHLMKDSRNIVGGIGREML---IVFTAIKKSHIKKNCIILKEDLKRYMTESNAVVDDALVCVESNTKTGN-------QYVPSIRMNLILIGKLDDDDYQS

Query:  EFGGNQWKVTKGSKLVAIGHRRSTVY
         F G  WKVTKG++++A G +  T+Y
Subjt:  EFGGNQWKVTKGSKLVAIGHRRSTVY

A5AK46 Integrase catalytic domain-containing protein

2.1e-39

34.44

Show/hide

Query:  KFDGANFRYWKMQIKDYLTCKMLNI-ALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM
        KFDG +F YW+MQI+DYL  + L++  L  +P  +K E+W   ++Q +  IRL+L  +VA  V  E    DLMKAL   YEK SANNKV+L+++ FN++M
Subjt:  KFDGANFRYWKMQIKDYLTCKMLNI-ALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM

Query:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKK---------RSEKESTSEKTQHW
         EN S+  ++NE   + NQL+SV+I F D++  +++L SL  S   M+  +SNS G +  K++   D   AEEIC++         +S K+   + + + 
Subjt:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKK---------RSEKESTSEKTQHW

Query:  LSKKVKRRLHLMKDSRNIVGGIGREMLIVFTAIKKSHIKKNCIILKEDLKRYMTESNAVVDDALVCVESNTKTGN-------QYVPSIRMNLILIGKLDD
        ++++V+  L L  DS   +     +    F       I +N  +  +  K Y+ + +A+    L  V  +   G+       +++P +R NLI IG+LDD
Subjt:  LSKKVKRRLHLMKDSRNIVGGIGREMLIVFTAIKKSHIKKNCIILKEDLKRYMTESNAVVDDALVCVESNTKTGN-------QYVPSIRMNLILIGKLDD

Query:  DDYQSEFGGNQWKVTKGSKLVAIGHRRSTVY
        + +   F G  WKVTKG++++A G +  T+Y
Subjt:  DDYQSEFGGNQWKVTKGSKLVAIGHRRSTVY

A5ASH8 gag_pre-integrs domain-containing protein

4.7e-39

34.78

Show/hide

Query:  KFDGANFRYWKMQIKDYLTCKMLNI-ALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM
        KFDG +F YW+MQI++YL  + L++  L  +P  +K E+W   ++Q +  IRL+L  +VA  +  E   IDLMKAL   YEK SANNKV+L+++ FN++M
Subjt:  KFDGANFRYWKMQIKDYLTCKMLNI-ALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQM

Query:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKKRSEKESTSEKTQHWLSKKVKRRL
         EN S+  ++NE   + NQL+SVKI F D+++ +++L SL  S ++M+  +SNS G + LK++   D   AEEI ++R   E++   +   L+ + + R+
Subjt:  EENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKKRSEKESTSEKTQHWLSKKVKRRL

Query:  HLMKDSRNIVGGIGREMLIVFTAIKKSHIKKNCIILKEDLKRYMTESNAVVDDALVCVESNTKTGN-------QYVPSIRMNLILIGKLDDDDYQSEFGG
            D   +  G        F       I +N  +  +  K Y+ + +A+    L  V  +   G+       +++P +R NLI +G+LDD+ +   F G
Subjt:  HLMKDSRNIVGGIGREMLIVFTAIKKSHIKKNCIILKEDLKRYMTESNAVVDDALVCVESNTKTGN-------QYVPSIRMNLILIGKLDDDDYQSEFGG

Query:  NQWKVTKGSKLVAIGHRRSTVY
          WKVTKG++++A G +  T+Y
Subjt:  NQWKVTKGSKLVAIGHRRSTVY

SwissProt top hits

e value

%identity

Alignment

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

7.1e-16

25.31

Show/hide

Query:  KFDGAN-FRYWKMQIKDYLTCKMLNIAL---KERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFN
        KF+G N F  W+ +++D L  + L+  L    ++P  +K EDW + +++A + IRL L  +V + + +E  A  +   LE+ Y   +  NK+YL ++ + 
Subjt:  KFDGAN-FRYWKMQIKDYLTCKMLNIAL---KERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFN

Query:  IQMEENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATA--EEICKK--------------RSEK
        + M E T+  S++N    LI QLA++ +   ++   ILLL SL  S + + TT+   L GK+    K+  +A    E++ KK              RS +
Subjt:  IQMEENTSINSYINEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATA--EEICKK--------------RSEK

Query:  ESTSEKTQHWLSKKVKRRL--------------HLMKDSRNIVGG----IGREMLIVFTAIKKSHIKKNCIILKEDLKRYMT--ESNAVVDDAL------
         S++   +     K K R               H  +D  N   G     G++      A+ +++      I +E+   +++  ES  VVD A       
Subjt:  ESTSEKTQHWLSKKVKRRL--------------HLMKDSRNIVGG----IGREMLIVFTAIKKSHIKKNCIILKEDLKRYMT--ESNAVVDDAL------

Query:  -------------------------------VCVESN-----TKTGNQYVPSIRMNLILIGKLDDDDYQSEFGGNQWKVTKGSKLVAIGHRRSTVYTSQL
                                       +C+++N          ++VP +RMNLI    LD D Y+S F   +W++TKGS ++A G  R T+Y +  
Subjt:  -------------------------------VCVESN-----TKTGNQYVPSIRMNLILIGKLDDDDYQSEFGGNQWKVTKGSKLVAIGHRRSTVYTSQL

Query:  SVARRSL
         + +  L
Subjt:  SVARRSL

Arabidopsis top hits

e value

%identity

Alignment

AT3G29785.1 unknown protein

4.3e-08

36.36

Show/hide

Query:  KFDGANFRYWKMQIKDYLTCKMLNIALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKV
        K DG ++ + +M+I+DYL  K L+  L ++   +  +DW    +Q +  IRL++  N+A  VA E +   LMK L + Y+K S NN V
Subjt:  KFDGANFRYWKMQIKDYLTCKMLNIALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGTTCGATGGGGCCAATTTCCGATATTGGAAAATGCAGATTAAGGATTACTTGACCTGCAAGATGTTGAATATAGCTTTAAAGGAACGACCAGCAGAGGTGAAAGA
TGAAGATTGGGTAGAGACAAATCAACAGGCAGTTGCCTTTATCAGATTATCTTTGTTGATGAATGTGGCAAGTCTCGTAGCAAACGAAATAAATGCAATAGATCTGATGA
AAGCACTGGAGAATAGGTACGAGAAATCCTCAGCTAATAATAAGGTATATCTCGTAAGGAGATTCTTTAACATTCAGATGGAAGAGAACACTTCTATCAATTCCTACATA
AATGAAGTCACAAAATTAATCAATCAATTGGCATCAGTCAAGATTACTTTTAGTGACAAAGTGAATGTTATTTTGTTGCTAACATCTTTATCTGAAAGCTTGGAAATGAT
GAAGACAACAATGTCCAATTCGTTAGGAGGAAAATCTTTGAAATTTTCAAAAAATTTTGATGCCGCAACTGCTGAAGAAATTTGCAAAAAGAGGAGTGAAAAAGAATCTA
CTTCCGAAAAAACTCAGCATTGGTTGTCGAAAAAGGTAAAGAGAAGGTTGCATCTGATGAAAGATAGCAGAAACATAGTAGGAGGGATTGGAAGAGAGATGCTGATTGTT
TTCACTGCCATAAAAAAGAGCCACATCAAGAAAAATTGTATAATTTTAAAAGAGGATCTGAAAAGGTATATGACAGAGTCAAATGCAGTTGTAGACGATGCCCTCGTGTG
TGTTGAAAGCAACACAAAAACAGGAAACCAGTATGTACCCAGTATCAGAATGAATCTTATCTTGATAGGAAAGTTGGACGATGATGATTATCAGAGTGAGTTTGGTGGGA
ACCAGTGGAAGGTCACCAAAGGATCCAAGTTGGTGGCAATTGGCCATAGAAGATCTACAGTTTACACGTCACAATTGAGTGTTGCCAGAAGATCTTTGAAACAACGAATA
CGGATAGGTGAATTGATGAAGTCGCGTCAGCGAACAGTTGCATCAGAGAAGATGAACCCAATAGGTGCTGAGGTAAAGAATAGAGTTTCAATTCCGGCAACAGGCTTGAA
TAGAGTTGTCAAGTCATCATGGGAGGCAAGATCGATGTTTTGTCTCCAAGTGGGAGATTGTTGGGATAATGGAGCCAAAACAGATGACCCGTGTCCTATGAGGAAAGGAT
TTTCAACACTACTACCAATTCCTACAAGGAGCATGGAGAATGACTTGGGAGGTCGAGGTGCAATACTTGAAGTATTCTTCGGGGGTACCTACAAGGAGTTAGCTATCCCA
TCGGGGTATTTCCTTGCTCGCACGGGGTCCCTTGAGCGACCTTTGGTCCTTGCTTTGGACAGGTCCTTTCCCTCCTTTGGCAGGTGGGACTTGGCGACCTGCTTCCCCTT
CAGAGTAGTCGAGGTCGACTTGTTAGGTCGGTCTTTTCAATTTTGCTCGAACAAGTCGAACGTCTACAGTTTGACCCCCAATATTGGCCCCCTGTTGGGTCGGGCGACTG
GTCGCTCAGTTGAGAGACGTACGGGGGGCAGTGGTCGACCTGTTCTTGACCTTGCCTCCGAGTTGGCCATGGACAACGTGGACCAATCAGATACCCTCACTCGCATGTCT
CCACACGAACGACCTGGACGAGTCGTCTGTAACCTTTACAGAGTGGACCGTATCCATAGTGTTGCCAGTATAAGTGCCTCCATGCCTAGCTATTCAACCTTACGTCCCTC
CCCCCAGGGTCTCAAAAAAACCGAAGGGAGCCCGTCCAACCTGGGCTACGGCTGCCTAGCCTATTTTAGAGATCGGTACGACATTTCTGCGTTTATTGGGATGACGTTTC
CCAGGAAGGATGAGGCTATAAACAATCCTCTTGAAGGGCACATCGCCTTTTACGAGAAAATGTTTGAGTCCGGGGTCAGATATCGTAGGCACCGAATACCTCACCCCAAG
CCAATTTCTTTCCTTTTATACCGTCAAGAACCTACCAAGGAAGCCAGGTCAGTTCTACCTCACAGCTCGACAGGGTGTCGAGAAGTTGTCTGTGGATCGTCTTCCATCAA
GCACTGGAAGGAGGACTGGTTCTACTTGTATGGTGGCTGGTTGGCTAAGGGTCATTTTGTCAAGCTGGCGGTTCTTTGCTAA

mRNA sequence

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Protein sequence

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MKFDGANFRYWKMQIKDYLTCKMLNIALKERPAEVKDEDWVETNQQAVAFIRLSLLMNVASLVANEINAIDLMKALENRYEKSSANNKVYLVRRFFNIQMEENTSINSYI
NEVTKLINQLASVKITFSDKVNVILLLTSLSESLEMMKTTMSNSLGGKSLKFSKNFDAATAEEICKKRSEKESTSEKTQHWLSKKVKRRLHLMKDSRNIVGGIGREMLIV
FTAIKKSHIKKNCIILKEDLKRYMTESNAVVDDALVCVESNTKTGNQYVPSIRMNLILIGKLDDDDYQSEFGGNQWKVTKGSKLVAIGHRRSTVYTSQLSVARRSLKQRI
RIGELMKSRQRTVASEKMNPIGAEVKNRVSIPATGLNRVVKSSWEARSMFCLQVGDCWDNGAKTDDPCPMRKGFSTLLPIPTRSMENDLGGRGAILEVFFGGTYKELAIP
SGYFLARTGSLERPLVLALDRSFPSFGRWDLATCFPFRVVEVDLLGRSFQFCSNKSNVYSLTPNIGPLLGRATGRSVERRTGGSGRPVLDLASELAMDNVDQSDTLTRMS
PHERPGRVVCNLYRVDRIHSVASISASMPSYSTLRPSPQGLKKTEGSPSNLGYGCLAYFRDRYDISAFIGMTFPRKDEAINNPLEGHIAFYEKMFESGVRYRRHRIPHPK
PISFLLYRQEPTKEARSVLPHSSTGCREVVCGSSSIKHWKEDWFYLYGGWLAKGHFVKLAVLC

Moc03g19760 (gene) of Bitter gourd (OHB3-1) v2 genome