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Moc03g19800 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g19800
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr3:13334304..13335061
RNA-Seq ExpressionMoc03g19800
SyntenyMoc03g19800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EHA8591563.1 hypothetical protein [Cocos nucifera]1.7e-0534.78Show/hide
Query:  PTRSKSVNNEDLLQLFEQLWRELKSDLRKVQGKPVS-DDDEPNEPLFTQAILTAPISTTGKLPSFEKYDGSVDPVDHVEAYESLMDFHAYPD
        P R K++  +D     +Q   E+   + +++  P S  +D   +P F+Q I+   +    KLP FE YDG+ DPVDH+EA+ + M  H  PD
Subjt:  PTRSKSVNNEDLLQLFEQLWRELKSDLRKVQGKPVS-DDDEPNEPLFTQAILTAPISTTGKLPSFEKYDGSVDPVDHVEAYESLMDFHAYPD

GFS41820.1 hypothetical protein Acr_00g0076520 [Actinidia rufa]5.7e-0630.43Show/hide
Query:  EEMDAMRAQVAALTEALQTAGVPLPELPELEVQRDLRTGKAKAMGTNQKRSVGPDLSRLVLGGNDPLGDDLPTRSKSVNNEDLLQLFEQLWRELKSDLRK
        E+M  M  +   L + L  A  PLP +P  +++R   + +++    N K S  P  +R   G +   GD +  R+KS +         Q  R+L + L  
Subjt:  EEMDAMRAQVAALTEALQTAGVPLPELPELEVQRDLRTGKAKAMGTNQKRSVGPDLSRLVLGGNDPLGDDLPTRSKSVNNEDLLQLFEQLWRELKSDLRK

Query:  VQGK-----PVSDDDEPNEPLFTQAILTAPISTTGKLPS-FEKYDGSVDPVDHVEAYESLM
        +  +      V       EP FTQ +L A IS+  KLP+    Y+G  DP+DH+++Y+SLM
Subjt:  VQGK-----PVSDDDEPNEPLFTQAILTAPISTTGKLPS-FEKYDGSVDPVDHVEAYESLM

MQM08867.1 hypothetical protein [Colocasia esculenta]4.9e-0531.97Show/hide
Query:  GTNQKRSV-GPDLSRLVLGGNDPLGDDLPTRSKSVNNEDL---LQLFEQLWRELKSDLRKVQGKPVSDDDEPNEPLFTQAILTAPISTTGKLPSFEKYDG
        G + +RSV  P L RL++  N       P    + + ++L   L+    L R + + ++  +GK  +DDD      F++ IL A +S    LP+   YDG
Subjt:  GTNQKRSV-GPDLSRLVLGGNDPLGDDLPTRSKSVNNEDL---LQLFEQLWRELKSDLRKVQGKPVSDDDEPNEPLFTQAILTAPISTTGKLPSFEKYDG

Query:  SVDPVDHVEAYESLMDFHAYPD
        + DP DH+  +ES M FH   D
Subjt:  SVDPVDHVEAYESLMDFHAYPD

XP_022149836.1 uncharacterized protein LOC111018172 [Momordica charantia]5.7e-1444.35Show/hide
Query:  GKAKAMGTNQKRSVGPDLSRLVLGGNDPLGDDLPTRSKSVNNEDLLQLFEQLWRELKSDLRKVQGKPVSDDDEPNEPLFTQAILTAPISTTGKLPSFEKY
        G     G+N+  +   DL     G +D     LP + K+     L  L  +L  ELK +L+KV     ++DDEP+EP F Q IL APIS     P+F KY
Subjt:  GKAKAMGTNQKRSVGPDLSRLVLGGNDPLGDDLPTRSKSVNNEDLLQLFEQLWRELKSDLRKVQGKPVSDDDEPNEPLFTQAILTAPISTTGKLPSFEKY

Query:  DGSVDPVDHVEAYESLMDFHAYPD
        DG+ DPVDHVE YE +MDFHAY D
Subjt:  DGSVDPVDHVEAYESLMDFHAYPD

XP_022158652.1 uncharacterized protein LOC111025109 [Momordica charantia]2.2e-0541.98Show/hide
Query:  FEQLWRELKSDLRKVQGKPVSDDDEPN-----EPLFTQAILTAPISTTGKLPSFEKYDGSVDPVDHVEAYESLMDFHAYPD
        F+QL  EL + +  ++ K    DD  N     EP FT  +L API    K P+ + YDG+ DP D+VE +E LMDF A  D
Subjt:  FEQLWRELKSDLRKVQGKPVSDDDEPN-----EPLFTQAILTAPISTTGKLPSFEKYDGSVDPVDHVEAYESLMDFHAYPD

TrEMBL top hitse value%identityAlignment
A0A2N9EPT4 Ribonuclease H1.8e-0526.72Show/hide
Query:  VQRDLRTGKAKAMGTNQKRSVGPDLSRLVLGGNDPLGDDLPTRSKSVNNEDLLQLFEQLWRELKSDLRKVQGKPVSDDDEPNEPLFTQAILTAPISTTGK
        +QR+   GK K  G +++R  G   SR            +     S   E  ++   +   E+K + +    K + D     + LFT+ I++ P+ +  +
Subjt:  VQRDLRTGKAKAMGTNQKRSVGPDLSRLVLGGNDPLGDDLPTRSKSVNNEDLLQLFEQLWRELKSDLRKVQGKPVSDDDEPNEPLFTQAILTAPISTTGK

Query:  LPSFEKYDGSVDPVDHVEAYESLMDFHAYPD
        +PS E +DGS DP+DH+E+++++M     PD
Subjt:  LPSFEKYDGSVDPVDHVEAYESLMDFHAYPD

A0A6J1D9M1 uncharacterized protein LOC1110181722.8e-1444.35Show/hide
Query:  GKAKAMGTNQKRSVGPDLSRLVLGGNDPLGDDLPTRSKSVNNEDLLQLFEQLWRELKSDLRKVQGKPVSDDDEPNEPLFTQAILTAPISTTGKLPSFEKY
        G     G+N+  +   DL     G +D     LP + K+     L  L  +L  ELK +L+KV     ++DDEP+EP F Q IL APIS     P+F KY
Subjt:  GKAKAMGTNQKRSVGPDLSRLVLGGNDPLGDDLPTRSKSVNNEDLLQLFEQLWRELKSDLRKVQGKPVSDDDEPNEPLFTQAILTAPISTTGKLPSFEKY

Query:  DGSVDPVDHVEAYESLMDFHAYPD
        DG+ DPVDHVE YE +MDFHAY D
Subjt:  DGSVDPVDHVEAYESLMDFHAYPD

A0A7J0DUB5 Retrotrans_gag domain-containing protein2.8e-0630.43Show/hide
Query:  EEMDAMRAQVAALTEALQTAGVPLPELPELEVQRDLRTGKAKAMGTNQKRSVGPDLSRLVLGGNDPLGDDLPTRSKSVNNEDLLQLFEQLWRELKSDLRK
        E+M  M  +   L + L  A  PLP +P  +++R   + +++    N K S  P  +R   G +   GD +  R+KS +         Q  R+L + L  
Subjt:  EEMDAMRAQVAALTEALQTAGVPLPELPELEVQRDLRTGKAKAMGTNQKRSVGPDLSRLVLGGNDPLGDDLPTRSKSVNNEDLLQLFEQLWRELKSDLRK

Query:  VQGK-----PVSDDDEPNEPLFTQAILTAPISTTGKLPS-FEKYDGSVDPVDHVEAYESLM
        +  +      V       EP FTQ +L A IS+  KLP+    Y+G  DP+DH+++Y+SLM
Subjt:  VQGK-----PVSDDDEPNEPLFTQAILTAPISTTGKLPS-FEKYDGSVDPVDHVEAYESLM

A0A7J0GBI2 Retrotrans_gag domain-containing protein8.9e-0528.57Show/hide
Query:  RSDTSKPPTGRKPKTRADSQRSKSRLQVKMVFDPQEEMDAMRAQVAALTEALQTAGVPLPELPELEVQRDLRTGKAKAMGTNQKRSVGPDLSRLVLGGND
        R   S PP  R       +Q        + + D  E+M  M      L + L  A  PLP +P +    D+   +      N+ R++  D  R     + 
Subjt:  RSDTSKPPTGRKPKTRADSQRSKSRLQVKMVFDPQEEMDAMRAQVAALTEALQTAGVPLPELPELEVQRDLRTGKAKAMGTNQKRSVGPDLSRLVLGGND

Query:  PLGDDLPTRSKSVNNEDLLQLFEQLWRELKSDLRKVQ---GKPVSDDD--EPNEPLFTQAILTAPISTTGKLPS-FEKYDGSVDPVDHVEAYESLMDFHA
          GD    R KS +         Q  R+L + L  +    G PV+ D   +  EP FT+ IL A IS+  KLP+    Y+G  DP+DH+++Y+SLM    
Subjt:  PLGDDLPTRSKSVNNEDLLQLFEQLWRELKSDLRKVQ---GKPVSDDD--EPNEPLFTQAILTAPISTTGKLPS-FEKYDGSVDPVDHVEAYESLMDFHA

Query:  YPD
          D
Subjt:  YPD

A0A7J0GXU1 Retrotrans_gag domain-containing protein4.4e-0429.56Show/hide
Query:  RSDTSKPPTGRKPKTRADSQRSKSRLQVKMVFDPQEEMDAMRAQVAALTEALQTAGVPLPELPELEVQRDLRTGKAKAMGTNQKRSVGPDLSRLVLGGND
        R   S PP  R       +Q        + + D  E+M  M      L + L  A  PLP  P +   R    G AK       + V P+L +L    +D
Subjt:  RSDTSKPPTGRKPKTRADSQRSKSRLQVKMVFDPQEEMDAMRAQVAALTEALQTAGVPLPELPELEVQRDLRTGKAKAMGTNQKRSVGPDLSRLVLGGND

Query:  PLGDDLPTRSKSVNNEDLLQLFEQLWRELKSDLRKVQ---GKPVSDDD--EPNEPLFTQAILTAPISTTGKLPS-FEKYDGSVDPVDHVEAYESLMDFHA
          G   P    ++ +E  ++   Q  R+L + L  +    G PV+ D   +  EP FT+ IL A IS+  KLP+    Y+G  DP+DH+++Y+SLM    
Subjt:  PLGDDLPTRSKSVNNEDLLQLFEQLWRELKSDLRKVQ---GKPVSDDD--EPNEPLFTQAILTAPISTTGKLPS-FEKYDGSVDPVDHVEAYESLMDFHA

Query:  YPD
          D
Subjt:  YPD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGAAGGATCCCAAACGTCAAGTAATCGAGAACCGAAAGACTCGAAAGCTCGGTCGGACACTTCCAAACCACCAACAGGTCGGAAGCCCAAAACCCGGGCAGACTC
CCAAAGGTCGAAGTCTCGGCTCCAGGTCAAGATGGTGTTCGACCCACAAGAAGAGATGGATGCCATGAGGGCCCAGGTCGCGGCCCTAACTGAGGCATTGCAGACGGCAG
GAGTGCCACTCCCCGAGCTCCCTGAGCTCGAAGTCCAACGCGACCTCAGAACGGGAAAGGCAAAGGCTATGGGGACCAACCAGAAGAGGTCAGTAGGACCAGACCTATCA
AGGCTCGTCCTTGGGGGAAACGACCCCCTTGGGGACGACCTCCCAACGAGGTCGAAATCGGTCAACAACGAGGACCTGCTACAATTGTTTGAACAACTTTGGAGGGAACT
CAAGAGCGACCTCCGAAAGGTTCAGGGGAAGCCAGTCTCGGACGACGATGAGCCCAATGAGCCACTGTTCACCCAAGCCATCTTGACCGCTCCGATCTCGACCACAGGGA
AGCTACCGAGCTTCGAGAAGTATGATGGGTCAGTCGATCCGGTAGATCATGTGGAGGCCTACGAGTCATTGATGGACTTCCACGCTTACCCCGACATGCCATCAAGTGCA
GCCGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGGAAGGATCCCAAACGTCAAGTAATCGAGAACCGAAAGACTCGAAAGCTCGGTCGGACACTTCCAAACCACCAACAGGTCGGAAGCCCAAAACCCGGGCAGACTC
CCAAAGGTCGAAGTCTCGGCTCCAGGTCAAGATGGTGTTCGACCCACAAGAAGAGATGGATGCCATGAGGGCCCAGGTCGCGGCCCTAACTGAGGCATTGCAGACGGCAG
GAGTGCCACTCCCCGAGCTCCCTGAGCTCGAAGTCCAACGCGACCTCAGAACGGGAAAGGCAAAGGCTATGGGGACCAACCAGAAGAGGTCAGTAGGACCAGACCTATCA
AGGCTCGTCCTTGGGGGAAACGACCCCCTTGGGGACGACCTCCCAACGAGGTCGAAATCGGTCAACAACGAGGACCTGCTACAATTGTTTGAACAACTTTGGAGGGAACT
CAAGAGCGACCTCCGAAAGGTTCAGGGGAAGCCAGTCTCGGACGACGATGAGCCCAATGAGCCACTGTTCACCCAAGCCATCTTGACCGCTCCGATCTCGACCACAGGGA
AGCTACCGAGCTTCGAGAAGTATGATGGGTCAGTCGATCCGGTAGATCATGTGGAGGCCTACGAGTCATTGATGGACTTCCACGCTTACCCCGACATGCCATCAAGTGCA
GCCGAAGATTGA
Protein sequenceShow/hide protein sequence
MTEGSQTSSNREPKDSKARSDTSKPPTGRKPKTRADSQRSKSRLQVKMVFDPQEEMDAMRAQVAALTEALQTAGVPLPELPELEVQRDLRTGKAKAMGTNQKRSVGPDLS
RLVLGGNDPLGDDLPTRSKSVNNEDLLQLFEQLWRELKSDLRKVQGKPVSDDDEPNEPLFTQAILTAPISTTGKLPSFEKYDGSVDPVDHVEAYESLMDFHAYPDMPSSA
AED