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Moc03g19960 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g19960
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:13459903..13460700
RNA-Seq ExpressionMoc03g19960
SyntenyMoc03g19960
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]4.0e-5075.51Show/hide
Query:  AGSRSENRVTRIDIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLD
        A SRSENRV R D+ EQRG HLGPV++ HPE  E E +T QRGDLREHLNRKR SS RKGQSPS SHR+SNQQAESS+NP TP G+ITREEFDQL+ K D
Subjt:  AGSRSENRVTRIDIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLD

Query:  AQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP
        AQVEALKAKCE+KE   +DGDLGESPFTSD+LEA IP KFK PT+KP
Subjt:  AQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP

XP_022152033.1 uncharacterized protein LOC111019842 [Momordica charantia]2.9e-4094.79Show/hide
Query:  KRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP
        +RGSS RKGQSPSRSHRSSNQQAESSHNPATPAG+ITREEFDQLRGKLDAQVEALKAKCEQKEG LNDGDLGESPFTSDVLEAPIP KFKAPTVKP
Subjt:  KRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP

XP_022152854.1 uncharacterized protein LOC111020479 [Momordica charantia]5.6e-3644.64Show/hide
Query:  MVQPANSTNTVDRRTLAASDAHQREVEAALVEGQGHNGLATEPLRRSARITAPVLPPAHPRPSKATHGRGGTSKKGARGPAPAPTSAGSRSENRVTRIDI
        MVQPANSTNT DRR LAA+  HQREV A +VEGQGH  L TEPL RSARIT PVLPPAHP+PSK                                    
Subjt:  MVQPANSTNTVDRRTLAASDAHQREVEAALVEGQGHNGLATEPLRRSARITAPVLPPAHPRPSKATHGRGGTSKKGARGPAPAPTSAGSRSENRVTRIDI

Query:  REQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLDAQVEALKAKCEQKE
                                                                   AESS+NP TP G+ITREEFDQL+ K DAQVEALKA+CE+KE
Subjt:  REQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLDAQVEALKAKCEQKE

Query:  GPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP
           +DGDLGE  F+SD+LEA IPPKFK PT+KP
Subjt:  GPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]6.6e-3774.14Show/hide
Query:  DNESEGHTRQRGDLREHLNRKRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDV
        + E E +T QRGDLREHLNRKR SS RKGQSPS SHR+SNQQAESS+NP TP  +ITREEFDQL+ K DAQVEALKA CE+KE   +DGDLGE PFT D+
Subjt:  DNESEGHTRQRGDLREHLNRKRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDV

Query:  LEAPIPPKFKAPTVKP
        LEAPI PKFK PT+KP
Subjt:  LEAPIPPKFKAPTVKP

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]6.8e-5857.85Show/hide
Query:  MVQPANSTNTVDRRTLAASDAHQREVEAALVEGQGHNGLATEPLRRSARITAPVLPPAHPRPSKATHGRGGTSKKGARGPAPAPTSAGSRSENRVTRIDI
        MVQP +STNT DRR L A+D HQREV A +VEGQ H GL TEP  RSARIT P L PAHP+P KA  GRGG S++   G APAP    SR      + ++
Subjt:  MVQPANSTNTVDRRTLAASDAHQREVEAALVEGQGHNGLATEPLRRSARITAPVLPPAHPRPSKATHGRGGTSKKGARGPAPAPTSAGSRSENRVTRIDI

Query:  REQRGSHLGPVEEEHPE---------DNESEGHTRQRGDLREHLNRKRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLDAQVEA
           R   L  +EE + E          +E      +RGDLR+HL+RKR SS RKG+SPS SH++SNQQAESS+NP  P G+ITREEFDQL+ K DAQVE 
Subjt:  REQRGSHLGPVEEEHPE---------DNESEGHTRQRGDLREHLNRKRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLDAQVEA

Query:  LKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP
        LKA+CE K    +DGDLGESPFTSD+LEA IP KFK PT+KP
Subjt:  LKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP

TrEMBL top hitse value%identityAlignment
A0A6J1DDS5 uncharacterized protein LOC1110198421.4e-4094.79Show/hide
Query:  KRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP
        +RGSS RKGQSPSRSHRSSNQQAESSHNPATPAG+ITREEFDQLRGKLDAQVEALKAKCEQKEG LNDGDLGESPFTSDVLEAPIP KFKAPTVKP
Subjt:  KRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP

A0A6J1DDW5 uncharacterized protein LOC1110196341.9e-5075.51Show/hide
Query:  AGSRSENRVTRIDIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLD
        A SRSENRV R D+ EQRG HLGPV++ HPE  E E +T QRGDLREHLNRKR SS RKGQSPS SHR+SNQQAESS+NP TP G+ITREEFDQL+ K D
Subjt:  AGSRSENRVTRIDIREQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLD

Query:  AQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP
        AQVEALKAKCE+KE   +DGDLGESPFTSD+LEA IP KFK PT+KP
Subjt:  AQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP

A0A6J1DHB3 uncharacterized protein LOC1110204792.7e-3644.64Show/hide
Query:  MVQPANSTNTVDRRTLAASDAHQREVEAALVEGQGHNGLATEPLRRSARITAPVLPPAHPRPSKATHGRGGTSKKGARGPAPAPTSAGSRSENRVTRIDI
        MVQPANSTNT DRR LAA+  HQREV A +VEGQGH  L TEPL RSARIT PVLPPAHP+PSK                                    
Subjt:  MVQPANSTNTVDRRTLAASDAHQREVEAALVEGQGHNGLATEPLRRSARITAPVLPPAHPRPSKATHGRGGTSKKGARGPAPAPTSAGSRSENRVTRIDI

Query:  REQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLDAQVEALKAKCEQKE
                                                                   AESS+NP TP G+ITREEFDQL+ K DAQVEALKA+CE+KE
Subjt:  REQRGSHLGPVEEEHPEDNESEGHTRQRGDLREHLNRKRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLDAQVEALKAKCEQKE

Query:  GPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP
           +DGDLGE  F+SD+LEA IPPKFK PT+KP
Subjt:  GPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP

A0A6J1DM55 uncharacterized protein LOC1110222673.2e-3774.14Show/hide
Query:  DNESEGHTRQRGDLREHLNRKRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDV
        + E E +T QRGDLREHLNRKR SS RKGQSPS SHR+SNQQAESS+NP TP  +ITREEFDQL+ K DAQVEALKA CE+KE   +DGDLGE PFT D+
Subjt:  DNESEGHTRQRGDLREHLNRKRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDV

Query:  LEAPIPPKFKAPTVKP
        LEAPI PKFK PT+KP
Subjt:  LEAPIPPKFKAPTVKP

A0A6J1DZJ1 uncharacterized protein LOC1110257383.3e-5857.85Show/hide
Query:  MVQPANSTNTVDRRTLAASDAHQREVEAALVEGQGHNGLATEPLRRSARITAPVLPPAHPRPSKATHGRGGTSKKGARGPAPAPTSAGSRSENRVTRIDI
        MVQP +STNT DRR L A+D HQREV A +VEGQ H GL TEP  RSARIT P L PAHP+P KA  GRGG S++   G APAP    SR      + ++
Subjt:  MVQPANSTNTVDRRTLAASDAHQREVEAALVEGQGHNGLATEPLRRSARITAPVLPPAHPRPSKATHGRGGTSKKGARGPAPAPTSAGSRSENRVTRIDI

Query:  REQRGSHLGPVEEEHPE---------DNESEGHTRQRGDLREHLNRKRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLDAQVEA
           R   L  +EE + E          +E      +RGDLR+HL+RKR SS RKG+SPS SH++SNQQAESS+NP  P G+ITREEFDQL+ K DAQVE 
Subjt:  REQRGSHLGPVEEEHPE---------DNESEGHTRQRGDLREHLNRKRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLDAQVEA

Query:  LKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP
        LKA+CE K    +DGDLGESPFTSD+LEA IP KFK PT+KP
Subjt:  LKAKCEQKEGPLNDGDLGESPFTSDVLEAPIPPKFKAPTVKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAACCCGCAAACTCGACCAATACGGTAGATCGAAGGACTCTAGCTGCTAGCGATGCCCACCAGAGGGAGGTCGAAGCAGCATTGGTAGAGGGGCAAGGTCACAA
CGGCCTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTCCTACCACCTGCGCACCCAAGGCCATCCAAGGCCACCCATGGCCGAGGTGGGACCTCTA
AGAAAGGCGCCCGGGGTCCAGCCCCGGCTCCAACAAGCGCAGGGTCTCGATCTGAAAATCGAGTGACGCGCATTGACATACGCGAGCAAAGGGGTTCCCACCTCGGCCCA
GTCGAGGAGGAACATCCCGAAGACAACGAGAGCGAGGGACACACTCGCCAGAGGGGAGACCTCCGTGAGCATCTCAACAGAAAGAGAGGCTCATCCTTTCGAAAAGGACA
GTCACCATCCCGCTCACATCGGAGCTCCAACCAGCAGGCTGAATCTTCTCACAACCCAGCAACTCCCGCAGGGATGATCACAAGGGAGGAGTTCGACCAGCTGAGGGGCA
AGCTCGATGCTCAGGTTGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTCCACTGAACGATGGCGACCTGGGAGAATCGCCATTCACCTCGGACGTTTTGGAAGCA
CCGATCCCTCCGAAGTTCAAGGCTCCTACCGTGAAACCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAACCCGCAAACTCGACCAATACGGTAGATCGAAGGACTCTAGCTGCTAGCGATGCCCACCAGAGGGAGGTCGAAGCAGCATTGGTAGAGGGGCAAGGTCACAA
CGGCCTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCCTGTCCTACCACCTGCGCACCCAAGGCCATCCAAGGCCACCCATGGCCGAGGTGGGACCTCTA
AGAAAGGCGCCCGGGGTCCAGCCCCGGCTCCAACAAGCGCAGGGTCTCGATCTGAAAATCGAGTGACGCGCATTGACATACGCGAGCAAAGGGGTTCCCACCTCGGCCCA
GTCGAGGAGGAACATCCCGAAGACAACGAGAGCGAGGGACACACTCGCCAGAGGGGAGACCTCCGTGAGCATCTCAACAGAAAGAGAGGCTCATCCTTTCGAAAAGGACA
GTCACCATCCCGCTCACATCGGAGCTCCAACCAGCAGGCTGAATCTTCTCACAACCCAGCAACTCCCGCAGGGATGATCACAAGGGAGGAGTTCGACCAGCTGAGGGGCA
AGCTCGATGCTCAGGTTGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTCCACTGAACGATGGCGACCTGGGAGAATCGCCATTCACCTCGGACGTTTTGGAAGCA
CCGATCCCTCCGAAGTTCAAGGCTCCTACCGTGAAACCTTAA
Protein sequenceShow/hide protein sequence
MVQPANSTNTVDRRTLAASDAHQREVEAALVEGQGHNGLATEPLRRSARITAPVLPPAHPRPSKATHGRGGTSKKGARGPAPAPTSAGSRSENRVTRIDIREQRGSHLGP
VEEEHPEDNESEGHTRQRGDLREHLNRKRGSSFRKGQSPSRSHRSSNQQAESSHNPATPAGMITREEFDQLRGKLDAQVEALKAKCEQKEGPLNDGDLGESPFTSDVLEA
PIPPKFKAPTVKP