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Moc03g20100 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g20100
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA-directed DNA polymerase
Genome locationchr3:13570061..13571201
RNA-Seq ExpressionMoc03g20100
SyntenyMoc03g20100
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151603.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111019515 [Momordica charantia]3.0e-3271.55Show/hide
Query:  IEEELEATEDECPKLTEDTYPPEEKDDIKVEVCKTLQPSIVEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADI
        IEEEL    D+  +  ED   P EK  I+ E CK+L PSIVEPPTLEQKPLPSHLKYAYLG N+TLPVI+ S+LS  NE SLLQI  K+KKAI WTIADI
Subjt:  IEEELEATEDECPKLTEDTYPPEEKDDIKVEVCKTLQPSIVEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADI

Query:  RGISPAFCMHKILLEE
        RGISPAFCMHKILLEE
Subjt:  RGISPAFCMHKILLEE

XP_022158979.1 uncharacterized protein LOC111025424 [Momordica charantia]6.5e-2777.01Show/hide
Query:  VEVCKTLQPSIVEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADIRGISPAFCMHKILLEE
        V++  T +P+IVEPPTLEQKPLPSHLKYAYLG N+TLPVII+S+LS  NE SLLQI  K+KKAI WTIADIRGIS  FCMHKILLEE
Subjt:  VEVCKTLQPSIVEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADIRGISPAFCMHKILLEE

XP_030485610.1 uncharacterized protein LOC115702304 [Cannabis sativa]3.8e-2746.33Show/hide
Query:  MRVNNEEVKFNVLDTMKLLGGLEEYSDISTSNPALFDEFY-----DLLVVGIEEELEA-TEDECPKL--TEDTYPPE------EKDDIKVEVCKTLQPSI
        MRVN+++V FNV + M+    +EE S +S  +  + + F+     D  V+   E+LEA +EDE  ++   E   P        E  ++K    K  +PSI
Subjt:  MRVNNEEVKFNVLDTMKLLGGLEEYSDISTSNPALFDEFY-----DLLVVGIEEELEA-TEDECPKL--TEDTYPPE------EKDDIKVEVCKTLQPSI

Query:  VEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADIRGISPAFCMHKILLEEG
         EPP LE KPLPSHLKYAYLG NE LP+IIS+ L  E E  LL++  K+K+AI WT+ADI+GISPA C HKI+LE G
Subjt:  VEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADIRGISPAFCMHKILLEEG

XP_030502183.1 uncharacterized protein LOC115717351 [Cannabis sativa]3.4e-2845.76Show/hide
Query:  MRVNNEEVKFNVLDTMKLLGGLEEYSDISTSNPALFDEFY------DLLVVGIEEELEATEDECPKL--TEDTYP------PEEKDDIKVEVCKTLQPSI
        MRVN+++V FNV + M+    +EE S IS  +  + ++F+      +  +   +E  + +EDE  ++   E   P      P E  ++K    K  +PS 
Subjt:  MRVNNEEVKFNVLDTMKLLGGLEEYSDISTSNPALFDEFY------DLLVVGIEEELEATEDECPKL--TEDTYP------PEEKDDIKVEVCKTLQPSI

Query:  VEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADIRGISPAFCMHKILLEEG
         EPP LE KPLPSHLKYAYLG N+TLPVII+S+L  E+E +LL++  K+KKAI WT+ADIRGISP  C HKILLE G
Subjt:  VEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADIRGISPAFCMHKILLEEG

XP_030504461.1 uncharacterized protein LOC115719521 [Cannabis sativa]2.6e-2848.59Show/hide
Query:  MRVNNEEVKFNVLDTMKLLGGLEEYSDISTSNPALFDEFY-----DLLVVGIEEELEA-TEDECPKLT--EDTYP-PE-----EKDDIKVEVCKTLQPSI
        MRVN+++V FNV + M+    +EE S +S  +  + + F+     D  V+   E+LEA +EDE  +++  E   P P+     E  ++K    K L+PSI
Subjt:  MRVNNEEVKFNVLDTMKLLGGLEEYSDISTSNPALFDEFY-----DLLVVGIEEELEA-TEDECPKLT--EDTYP-PE-----EKDDIKVEVCKTLQPSI

Query:  VEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADIRGISPAFCMHKILLEEG
         EPP LE KPLPSHLKYAYLG NETLPVIIS+ L  E E  LL++  K+K+AI WT+ADI+ ISP  CMHKILLE G
Subjt:  VEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADIRGISPAFCMHKILLEEG

TrEMBL top hitse value%identityAlignment
A0A2G9G4F1 DNA-directed DNA polymerase8.5e-2542.25Show/hide
Query:  MRVNNEEVKFNVLDTMKLLGGLEEYSDISTSNPALFDEFYDLLVVGIEEELEATEDECPKLTEDTYPPEEKDDIKV---------------------EVC
        MRV ++++ FNV   MK     +E  D+S     LFD      + G E   E   D   +   D    E ++D++V                        
Subjt:  MRVNNEEVKFNVLDTMKLLGGLEEYSDISTSNPALFDEFYDLLVVGIEEELEATEDECPKLTEDTYPPEEKDDIKV---------------------EVC

Query:  KTLQPSIVEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADIRGISPAFCMHKILLEEGRQP
        K L+PSI EPPTLE KPLPSHL YAYLG ++TLPVIISSS S     + L++   +K AI WTIADI+GISP+FCMHKILLE+ ++P
Subjt:  KTLQPSIVEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADIRGISPAFCMHKILLEEGRQP

A0A2G9HH15 Reverse transcriptase2.9e-2543.32Show/hide
Query:  MRVNNEEVKFNVLDTMKLLGGLEEYSDISTSNPALFDEFYDLLVVGIEEELEATEDECPKLTEDTYPPEEKDDIKV---------------------EVC
        MRV ++++ FNV   MK     +E   +S     LFD+     + G E   E   D   +   D    E ++D +V                        
Subjt:  MRVNNEEVKFNVLDTMKLLGGLEEYSDISTSNPALFDEFYDLLVVGIEEELEATEDECPKLTEDTYPPEEKDDIKV---------------------EVC

Query:  KTLQPSIVEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADIRGISPAFCMHKILLEEGRQP
        K L+PSI EPPTLE KPLPSHL YAYLG ++TLPVIISSSLS      LL++   +K AI WTIADI+GISP+FCMHKILLE+G++P
Subjt:  KTLQPSIVEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADIRGISPAFCMHKILLEEGRQP

A0A6J1DCL7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110195151.9e-3271.55Show/hide
Query:  IEEELEATEDECPKLTEDTYPPEEKDDIKVEVCKTLQPSIVEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADI
        IEEEL    D+  +  ED   P EK  I+ E CK+L PSIVEPPTLEQKPLPSHLKYAYLG N+TLPVI+ S+LS  NE SLLQI  K+KKAI WTIADI
Subjt:  IEEELEATEDECPKLTEDTYPPEEKDDIKVEVCKTLQPSIVEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADI

Query:  RGISPAFCMHKILLEE
        RGISPAFCMHKILLEE
Subjt:  RGISPAFCMHKILLEE

A0A6J1DV77 uncharacterized protein LOC1110238181.1e-2443.56Show/hide
Query:  MRVNNEEVKFNVLDTMKLLGGLEEYSDISTSNPALFDEFYDLLVVGIEEELEATEDECPKLTEDTYPPEEKDDIKVEVCKTLQPSIVEPPTLEQKPLPSH
        +RVN+++V  ++ +++K    +EE S +  ++  + DE      +  EE L   EDE  ++            IK  V   LQPS+V+ P LE K LPSH
Subjt:  MRVNNEEVKFNVLDTMKLLGGLEEYSDISTSNPALFDEFYDLLVVGIEEELEATEDECPKLTEDTYPPEEKDDIKVEVCKTLQPSIVEPPTLEQKPLPSH

Query:  LKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADIRGISPAFCMHKILLEEG
        LKYAYLG  ETLPV I++ L+ E E  L+++   +KKAI WT+ADI+GISP++CMHKI LEEG
Subjt:  LKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADIRGISPAFCMHKILLEEG

A0A6J1E110 uncharacterized protein LOC1110254242.4e-2777.01Show/hide
Query:  VEVCKTLQPSIVEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADIRGISPAFCMHKILLEE
        V++  T +P+IVEPPTLEQKPLPSHLKYAYLG N+TLPVII+S+LS  NE SLLQI  K+KKAI WTIADIRGIS  FCMHKILLEE
Subjt:  VEVCKTLQPSIVEPPTLEQKPLPSHLKYAYLGLNETLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADIRGISPAFCMHKILLEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTTAATAATGAGGAGGTGAAGTTTAATGTGTTGGATACAATGAAACTTCTAGGAGGTTTAGAAGAATATTCAGACATTAGTACTTCGAACCCTGCTTTGTTTGA
TGAGTTTTATGATCTTTTAGTTGTAGGAATTGAGGAAGAACTAGAAGCTACAGAAGATGAATGCCCGAAATTGACTGAAGATACGTATCCACCAGAGGAGAAAGATGATA
TAAAGGTAGAAGTGTGCAAAACATTGCAACCATCCATTGTGGAACCACCCACTTTGGAACAAAAGCCTTTACCTTCTCACTTGAAATACGCTTATCTTGGACTTAATGAA
ACTTTGCCTGTTATTATTTCTTCCAGTTTATCTACTGAAAATGAGCTTTCATTGTTGCAGATTTTTGTGAAATACAAGAAGGCCATTGCTTGGACCATTGCTGACATTCG
AGGGATAAGCCCTGCATTCTGCATGCATAAGATCCTATTGGAAGAAGGTCGGCAACCCCGACGATACACAGACTACACACGTCTCTCGGTGATCACAAGTTCAGACCAAC
CTACACCACAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTTAATAATGAGGAGGTGAAGTTTAATGTGTTGGATACAATGAAACTTCTAGGAGGTTTAGAAGAATATTCAGACATTAGTACTTCGAACCCTGCTTTGTTTGA
TGAGTTTTATGATCTTTTAGTTGTAGGAATTGAGGAAGAACTAGAAGCTACAGAAGATGAATGCCCGAAATTGACTGAAGATACGTATCCACCAGAGGAGAAAGATGATA
TAAAGGTAGAAGTGTGCAAAACATTGCAACCATCCATTGTGGAACCACCCACTTTGGAACAAAAGCCTTTACCTTCTCACTTGAAATACGCTTATCTTGGACTTAATGAA
ACTTTGCCTGTTATTATTTCTTCCAGTTTATCTACTGAAAATGAGCTTTCATTGTTGCAGATTTTTGTGAAATACAAGAAGGCCATTGCTTGGACCATTGCTGACATTCG
AGGGATAAGCCCTGCATTCTGCATGCATAAGATCCTATTGGAAGAAGGTCGGCAACCCCGACGATACACAGACTACACACGTCTCTCGGTGATCACAAGTTCAGACCAAC
CTACACCACAGTAG
Protein sequenceShow/hide protein sequence
MRVNNEEVKFNVLDTMKLLGGLEEYSDISTSNPALFDEFYDLLVVGIEEELEATEDECPKLTEDTYPPEEKDDIKVEVCKTLQPSIVEPPTLEQKPLPSHLKYAYLGLNE
TLPVIISSSLSTENELSLLQIFVKYKKAIAWTIADIRGISPAFCMHKILLEEGRQPRRYTDYTRLSVITSSDQPTPQ