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Moc03g20110 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g20110
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022160
Genome locationchr3:13572094..13575865
RNA-Seq ExpressionMoc03g20110
SyntenyMoc03g20110
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143608.1 uncharacterized protein LOC111013464 [Momordica charantia]2.6e-8371.49Show/hide
Query:  MMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMVTMNQMLKVLALERK---SAPAAPVQPEYAAPSPVCQ
        MM NN ANGAFTKKTFNEIVD L DLASHNELWCSQR ++APKKQD AGVLALDIATSM+KEMVTMNQ LK +AL  K   + P  PVQP+Y  P+PVCQ
Subjt:  MMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMVTMNQMLKVLALERK---SAPAAPVQPEYAAPSPVCQ

Query:  INEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGVNQGQNHQYKHPYVPPTFSSNQQMPPPLQQYNRNQRT
        +N+++CS+CS+NH+Y+NC HN ASV+Y+ HGNNRNFNPYSNTYNPGWRH+PNFSWGGQG SSG NQGQ+ Q K PYVPPT    Q +PP  QQYN+  +T
Subjt:  INEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGVNQGQNHQYKHPYVPPTFSSNQQMPPPLQQYNRNQRT

Query:  PIQPAQNTNSSLENMMKEYMA
        P+   QN NS+LENMMKEYMA
Subjt:  PIQPAQNTNSSLENMMKEYMA

XP_022150317.1 uncharacterized protein LOC111018514 [Momordica charantia]1.9e-10285.71Show/hide
Query:  LDHPTKMMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMVTMNQMLKVLALERKSAPAAPVQPEYAAPSP
        LDHPTKMM NN ANGAFTKKTFNEIVD LEDLASHNELWCSQRSK APKKQDQAGVLALDIATSM+KEM TMNQMLK LALERKSAP  P QPEYA  SP
Subjt:  LDHPTKMMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMVTMNQMLKVLALERKSAPAAPVQPEYAAPSP

Query:  VCQINEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGVNQGQNHQYKHPYVPPTFSSNQQMPPPLQQYNRN
        VCQINEIVCSYCSDNHVYENC HN AS YY+GHG NR FNPYSNTYNPG RH+PNFSWGGQGSSSG  QGQN QYK PYVP TFSSNQQMPPP QQYN+N
Subjt:  VCQINEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGVNQGQNHQYKHPYVPPTFSSNQQMPPPLQQYNRN

Query:  QRTPIQPAQNTNSSLENMMKEYMA
        QRTP QPA N N+SLENM KEYMA
Subjt:  QRTPIQPAQNTNSSLENMMKEYMA

XP_022157400.1 uncharacterized protein LOC111024107 [Momordica charantia]6.8e-6854.76Show/hide
Query:  AWEAFKELLRKCPNHGLPACIQIEHFFRGLDHPTKMMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMVT
        AWE FK+L+R CPN G+PAC+QIEHFFRG D PTKMM N  ANG FT K+FNEIV+ L+ L+ HN+ W S+RS++  K+ D AGVLALD  TSM+K++ T
Subjt:  AWEAFKELLRKCPNHGLPACIQIEHFFRGLDHPTKMMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMVT

Query:  MNQMLKVLALERKSAPAAPVQPEYAAPSPVCQINEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGVNQGQ
        + QMLK   +E+ +A AA   P    PSPV QI E  C YC D H  ENC  N +S+YY+G  N + FNPYSNTY+PGW+ +PNFSW GQGSSS  + GQ
Subjt:  MNQMLKVLALERKSAPAAPVQPEYAAPSPVCQINEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGVNQGQ

Query:  NHQYKHPYVPPTFSSNQQMPPPLQQYNRNQRTPIQPAQNTNSSLENMMKEYM
        N QYK  Y PP F ++   PP   QYN+ Q+  +QP Q   S++E +MKE++
Subjt:  NHQYKHPYVPPTFSSNQQMPPPLQQYNRNQRTPIQPAQNTNSSLENMMKEYM

XP_022158408.1 uncharacterized protein LOC111024897, partial [Momordica charantia]4.7e-7761.87Show/hide
Query:  KAWEAFKELLRKCPNHGLPACIQIEHFFRGLDHPTKMMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMV
        +AWE FKEL+RKC NHGLPAC QIEHFFRGLDHPTKMM NN ANGAFTKKTFNEIVD L DLASHNELWCSQRS++APKKQD AGVLALDIATSM+KEMV
Subjt:  KAWEAFKELLRKCPNHGLPACIQIEHFFRGLDHPTKMMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMV

Query:  TMNQMLKVLALERKSAPAA---PVQPEYAAPSPVCQINEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGV
        TMNQ LK +AL  K+  A    PVQ +Y   +PVCQ+N+++C                                        WRH+PNFSWGGQG SSG 
Subjt:  TMNQMLKVLALERKSAPAA---PVQPEYAAPSPVCQINEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGV

Query:  NQGQNHQYKHPYVPPTFSSNQQMPPPLQQYNRNQRTPIQPAQNTNSSLENMMKEYMA
        NQGQ+ Q K PYVPPT    Q +PPP QQYN+  +TP  P QN NS+LENMMKEYMA
Subjt:  NQGQNHQYKHPYVPPTFSSNQQMPPPLQQYNRNQRTPIQPAQNTNSSLENMMKEYMA

XP_022159345.1 uncharacterized protein LOC111025764 [Momordica charantia]1.8e-8169.68Show/hide
Query:  MMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMVTMNQMLKVLALERKSAPAAPVQP---EYAAPSPVCQ
        MM NN ANGAFTKKTFNEIVD L DLASHNELWCSQRS++APKKQD AGVLALDIA+SM+KE VTMNQ LK + L  K+  A P+QP   +Y  P+PVCQ
Subjt:  MMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMVTMNQMLKVLALERKSAPAAPVQP---EYAAPSPVCQ

Query:  INEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGVNQGQNHQYKHPYVPPTFSSNQQMPPPLQQYNRNQRT
        +N+++CS+CS+NH+Y+ C HN ASV+Y+GHGNNRNFNPYSNTYNPGWRH+PNFSW GQG S G NQGQ+ Q K PYVPPT    Q +PPP Q+YN+  +T
Subjt:  INEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGVNQGQNHQYKHPYVPPTFSSNQQMPPPLQQYNRNQRT

Query:  PIQPAQNTNSSLENMMKEYMA
        P  P QN NS+LENMMKEYMA
Subjt:  PIQPAQNTNSSLENMMKEYMA

TrEMBL top hitse value%identityAlignment
A0A6J1CR45 uncharacterized protein LOC1110134641.2e-8371.49Show/hide
Query:  MMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMVTMNQMLKVLALERK---SAPAAPVQPEYAAPSPVCQ
        MM NN ANGAFTKKTFNEIVD L DLASHNELWCSQR ++APKKQD AGVLALDIATSM+KEMVTMNQ LK +AL  K   + P  PVQP+Y  P+PVCQ
Subjt:  MMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMVTMNQMLKVLALERK---SAPAAPVQPEYAAPSPVCQ

Query:  INEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGVNQGQNHQYKHPYVPPTFSSNQQMPPPLQQYNRNQRT
        +N+++CS+CS+NH+Y+NC HN ASV+Y+ HGNNRNFNPYSNTYNPGWRH+PNFSWGGQG SSG NQGQ+ Q K PYVPPT    Q +PP  QQYN+  +T
Subjt:  INEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGVNQGQNHQYKHPYVPPTFSSNQQMPPPLQQYNRNQRT

Query:  PIQPAQNTNSSLENMMKEYMA
        P+   QN NS+LENMMKEYMA
Subjt:  PIQPAQNTNSSLENMMKEYMA

A0A6J1DAE9 uncharacterized protein LOC1110185149.1e-10385.71Show/hide
Query:  LDHPTKMMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMVTMNQMLKVLALERKSAPAAPVQPEYAAPSP
        LDHPTKMM NN ANGAFTKKTFNEIVD LEDLASHNELWCSQRSK APKKQDQAGVLALDIATSM+KEM TMNQMLK LALERKSAP  P QPEYA  SP
Subjt:  LDHPTKMMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMVTMNQMLKVLALERKSAPAAPVQPEYAAPSP

Query:  VCQINEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGVNQGQNHQYKHPYVPPTFSSNQQMPPPLQQYNRN
        VCQINEIVCSYCSDNHVYENC HN AS YY+GHG NR FNPYSNTYNPG RH+PNFSWGGQGSSSG  QGQN QYK PYVP TFSSNQQMPPP QQYN+N
Subjt:  VCQINEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGVNQGQNHQYKHPYVPPTFSSNQQMPPPLQQYNRN

Query:  QRTPIQPAQNTNSSLENMMKEYMA
        QRTP QPA N N+SLENM KEYMA
Subjt:  QRTPIQPAQNTNSSLENMMKEYMA

A0A6J1DSZ5 uncharacterized protein LOC1110241073.3e-6854.76Show/hide
Query:  AWEAFKELLRKCPNHGLPACIQIEHFFRGLDHPTKMMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMVT
        AWE FK+L+R CPN G+PAC+QIEHFFRG D PTKMM N  ANG FT K+FNEIV+ L+ L+ HN+ W S+RS++  K+ D AGVLALD  TSM+K++ T
Subjt:  AWEAFKELLRKCPNHGLPACIQIEHFFRGLDHPTKMMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMVT

Query:  MNQMLKVLALERKSAPAAPVQPEYAAPSPVCQINEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGVNQGQ
        + QMLK   +E+ +A AA   P    PSPV QI E  C YC D H  ENC  N +S+YY+G  N + FNPYSNTY+PGW+ +PNFSW GQGSSS  + GQ
Subjt:  MNQMLKVLALERKSAPAAPVQPEYAAPSPVCQINEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGVNQGQ

Query:  NHQYKHPYVPPTFSSNQQMPPPLQQYNRNQRTPIQPAQNTNSSLENMMKEYM
        N QYK  Y PP F ++   PP   QYN+ Q+  +QP Q   S++E +MKE++
Subjt:  NHQYKHPYVPPTFSSNQQMPPPLQQYNRNQRTPIQPAQNTNSSLENMMKEYM

A0A6J1DW02 uncharacterized protein LOC1110248972.3e-7761.87Show/hide
Query:  KAWEAFKELLRKCPNHGLPACIQIEHFFRGLDHPTKMMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMV
        +AWE FKEL+RKC NHGLPAC QIEHFFRGLDHPTKMM NN ANGAFTKKTFNEIVD L DLASHNELWCSQRS++APKKQD AGVLALDIATSM+KEMV
Subjt:  KAWEAFKELLRKCPNHGLPACIQIEHFFRGLDHPTKMMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMV

Query:  TMNQMLKVLALERKSAPAA---PVQPEYAAPSPVCQINEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGV
        TMNQ LK +AL  K+  A    PVQ +Y   +PVCQ+N+++C                                        WRH+PNFSWGGQG SSG 
Subjt:  TMNQMLKVLALERKSAPAA---PVQPEYAAPSPVCQINEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGV

Query:  NQGQNHQYKHPYVPPTFSSNQQMPPPLQQYNRNQRTPIQPAQNTNSSLENMMKEYMA
        NQGQ+ Q K PYVPPT    Q +PPP QQYN+  +TP  P QN NS+LENMMKEYMA
Subjt:  NQGQNHQYKHPYVPPTFSSNQQMPPPLQQYNRNQRTPIQPAQNTNSSLENMMKEYMA

A0A6J1DYG0 uncharacterized protein LOC1110257648.9e-8269.68Show/hide
Query:  MMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMVTMNQMLKVLALERKSAPAAPVQP---EYAAPSPVCQ
        MM NN ANGAFTKKTFNEIVD L DLASHNELWCSQRS++APKKQD AGVLALDIA+SM+KE VTMNQ LK + L  K+  A P+QP   +Y  P+PVCQ
Subjt:  MMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMVTMNQMLKVLALERKSAPAAPVQP---EYAAPSPVCQ

Query:  INEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGVNQGQNHQYKHPYVPPTFSSNQQMPPPLQQYNRNQRT
        +N+++CS+CS+NH+Y+ C HN ASV+Y+GHGNNRNFNPYSNTYNPGWRH+PNFSW GQG S G NQGQ+ Q K PYVPPT    Q +PPP Q+YN+  +T
Subjt:  INEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGVNQGQNHQYKHPYVPPTFSSNQQMPPPLQQYNRNQRT

Query:  PIQPAQNTNSSLENMMKEYMA
        P  P QN NS+LENMMKEYMA
Subjt:  PIQPAQNTNSSLENMMKEYMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACCGGCGGCAGCGTCTGAGGTGAGACCGACGGCGACAGTGTCTGAGGCGAGTACCAACGCATCAATTATGCTACAGCATTGGAATCGAAAAGGAGCAGAAAACGA
AAAACTGACAGTGATAGAACTTTACTCTGGGAGTTGCCACAGTAACTTGAGGAATCACCTGGAAGTTCGTCGTCGCTCGCACCATTGGAAGTTACCATCGCTCCAACTGC
TCGGACCAATGGAGGTCACCATCGCCGGATCGTTGTCGTCCGCACACCGTGGAGCTGGTTTGAATGGAATTGGAGTTGGTTCATTCACGAAGCGGAGAGAGGCAGAAAGT
TTTTTCGATTTGAAAGGGGTGAAAATTAAAGCATGGGAGGCATTCAAGGAGTTGCTGCGGAAGTGTCCGAATCATGGATTACCAGCATGTATCCAGATTGAGCATTTCTT
CAGAGGTTTGGACCATCCCACTAAGATGATGTTCAACAACACCGCAAATGGAGCTTTCACAAAAAAGACCTTCAACGAAATAGTTGATACTTTGGAGGACCTAGCTTCCC
ACAACGAGCTATGGTGTTCTCAAAGGTCGAAATCGGCACCTAAGAAGCAAGATCAAGCGGGTGTATTGGCGTTGGACATAGCAACTTCAATGCGGAAAGAAATGGTGACG
ATGAACCAAATGCTCAAGGTGTTGGCCCTAGAAAGGAAGAGTGCACCAGCTGCACCCGTGCAACCAGAATATGCTGCTCCCTCTCCCGTTTGCCAAATTAATGAAATTGT
TTGTTCTTATTGTAGTGATAACCATGTTTATGAGAATTGTTCGCATAACCTAGCTTCTGTTTATTATATAGGTCACGGGAACAACCGGAACTTCAACCCCTATTCAAACA
CATACAATCCGGGGTGGAGACACTATCCCAACTTTTCATGGGGAGGTCAAGGAAGTTCTAGTGGAGTAAACCAAGGGCAGAACCACCAGTATAAGCATCCTTATGTCCCT
CCTACTTTTTCAAGCAATCAACAGATGCCACCACCACTACAACAGTATAATCGGAACCAAAGAACCCCAATTCAGCCAGCCCAGAATACTAATTCTAGCCTCGAGAATAT
GATGAAGGAGTACATGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGACCGGCGGCAGCGTCTGAGGTGAGACCGACGGCGACAGTGTCTGAGGCGAGTACCAACGCATCAATTATGCTACAGCATTGGAATCGAAAAGGAGCAGAAAACGA
AAAACTGACAGTGATAGAACTTTACTCTGGGAGTTGCCACAGTAACTTGAGGAATCACCTGGAAGTTCGTCGTCGCTCGCACCATTGGAAGTTACCATCGCTCCAACTGC
TCGGACCAATGGAGGTCACCATCGCCGGATCGTTGTCGTCCGCACACCGTGGAGCTGGTTTGAATGGAATTGGAGTTGGTTCATTCACGAAGCGGAGAGAGGCAGAAAGT
TTTTTCGATTTGAAAGGGGTGAAAATTAAAGCATGGGAGGCATTCAAGGAGTTGCTGCGGAAGTGTCCGAATCATGGATTACCAGCATGTATCCAGATTGAGCATTTCTT
CAGAGGTTTGGACCATCCCACTAAGATGATGTTCAACAACACCGCAAATGGAGCTTTCACAAAAAAGACCTTCAACGAAATAGTTGATACTTTGGAGGACCTAGCTTCCC
ACAACGAGCTATGGTGTTCTCAAAGGTCGAAATCGGCACCTAAGAAGCAAGATCAAGCGGGTGTATTGGCGTTGGACATAGCAACTTCAATGCGGAAAGAAATGGTGACG
ATGAACCAAATGCTCAAGGTGTTGGCCCTAGAAAGGAAGAGTGCACCAGCTGCACCCGTGCAACCAGAATATGCTGCTCCCTCTCCCGTTTGCCAAATTAATGAAATTGT
TTGTTCTTATTGTAGTGATAACCATGTTTATGAGAATTGTTCGCATAACCTAGCTTCTGTTTATTATATAGGTCACGGGAACAACCGGAACTTCAACCCCTATTCAAACA
CATACAATCCGGGGTGGAGACACTATCCCAACTTTTCATGGGGAGGTCAAGGAAGTTCTAGTGGAGTAAACCAAGGGCAGAACCACCAGTATAAGCATCCTTATGTCCCT
CCTACTTTTTCAAGCAATCAACAGATGCCACCACCACTACAACAGTATAATCGGAACCAAAGAACCCCAATTCAGCCAGCCCAGAATACTAATTCTAGCCTCGAGAATAT
GATGAAGGAGTACATGGCTTGA
Protein sequenceShow/hide protein sequence
MRPAAASEVRPTATVSEASTNASIMLQHWNRKGAENEKLTVIELYSGSCHSNLRNHLEVRRRSHHWKLPSLQLLGPMEVTIAGSLSSAHRGAGLNGIGVGSFTKRREAES
FFDLKGVKIKAWEAFKELLRKCPNHGLPACIQIEHFFRGLDHPTKMMFNNTANGAFTKKTFNEIVDTLEDLASHNELWCSQRSKSAPKKQDQAGVLALDIATSMRKEMVT
MNQMLKVLALERKSAPAAPVQPEYAAPSPVCQINEIVCSYCSDNHVYENCSHNLASVYYIGHGNNRNFNPYSNTYNPGWRHYPNFSWGGQGSSSGVNQGQNHQYKHPYVP
PTFSSNQQMPPPLQQYNRNQRTPIQPAQNTNSSLENMMKEYMA