CuGenDBv2

Gene ID	Moc03g20220
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	CCHC-type domain-containing protein
Genome location	chr3:13651734..13652651
RNA-Seq Expression	Moc03g20220
Synteny	Moc03g20220
Gene Ontology terms	NA
InterPro domains	IPR025558 - Domain of unknown function DUF4283

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

MCH83894.1 hypothetical protein [Trifolium medium]

6.6e-21

41.38

Show/hide

Query:  ESPVGRPWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEE
        E+ +  PW   DHYL ++ W P F  +  +I + A+WVRI   P+E Y+   +  IGD IG+T++VD  TL+ + G +AR+CVEVDLTKKL + F++   
Subjt:  ESPVGRPWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEE

Query:  RYSIQYEGIYVEFMWC
        +Y+++YEG+++  + C
Subjt:  RYSIQYEGIYVEFMWC

MCH84322.1 hypothetical protein [Trifolium medium]

1.1e-20

44.55

Show/hide

Query:  PWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSIQY
        PW   DHYL ++ WSP F  +  +I + A+WVRI   P+E Y+   +  IG+ IGKT+RVD  TL+ + G +AR+CVEVDLTK L + FT+   +Y+++Y
Subjt:  PWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSIQY

Query:  EGIYVEFMWC
        EG+++    C
Subjt:  EGIYVEFMWC

MCH97260.1 hypothetical protein [Trifolium medium]

6.6e-21

43.64

Show/hide

Query:  PWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSIQY
        PW   DHYL ++ WSP F  +  +I++  +WVRI   P+E Y+   +K IGD IG+T++VD  TL+ + G +AR+CVEVDLTKKL   F++   +Y+++Y
Subjt:  PWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSIQY

Query:  EGIYVEFMWC
        EG++   + C
Subjt:  EGIYVEFMWC

PNX84577.1 hypothetical protein L195_g040639, partial [Trifolium pratense]

8.6e-21

44.55

Show/hide

Query:  PWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSIQY
        PW   DHYL ++ WSP F  +  +I + A+WVRI   P+E Y+   +  IGD IGKT+RVD  TL+ + G +AR+CVEVDLT  L + FT+   +Y+++Y
Subjt:  PWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSIQY

Query:  EGIYVEFMWC
        EG+++  + C
Subjt:  EGIYVEFMWC

QHO20966.1 uncharacterized protein DS421_11g342530 [Arachis hypogaea]

2.5e-20

Show/hide

Query:  PWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSIQY
        PWK  DHYLA+R W P F    T+I++   WVR+   P+ELYN+  ++ IGD IGKT +VD  T     G FAR+CVEVDLTK L   + V  + Y+I+Y
Subjt:  PWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSIQY

Query:  EGIY
        EGI+
Subjt:  EGIY

TrEMBL top hits

e value

%identity

Alignment

A0A2K3M1B2 CCHC-type domain-containing protein (Fragment)

4.2e-21

44.55

Show/hide

Query:  PWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSIQY
        PW   DHYL ++ WSP F  +  +I + A+WVRI   P+E Y+   +  IGD IGKT+RVD  TL+ + G +AR+CVEVDLT  L + FT+   +Y+++Y
Subjt:  PWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSIQY

Query:  EGIYVEFMWC
        EG+++  + C
Subjt:  EGIYVEFMWC

A0A2Z6P4R9 Uncharacterized protein

1.6e-20

31.87

Show/hide

Query:  IVQNLRGEGIPTKCCETKANRQIKSLQILPYIP-----WIILFPNECGTLFALFTNPTVWNLGGSGESPVGRPWKDLDHYLAMRSWSPRFMASKTSINRA
        ++  L G  I  K  ET+  +      ++  I      +++ F +E G   AL                   PW   DHYL ++ W P F     +I   
Subjt:  IVQNLRGEGIPTKCCETKANRQIKSLQILPYIP-----WIILFPNECGTLFALFTNPTVWNLGGSGESPVGRPWKDLDHYLAMRSWSPRFMASKTSINRA

Query:  ALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSIQYEGIYVEFMWC
        A+WVRI   P+E Y+   +  IG+ +GKT++VD  TL  + G +AR+CV+VDLTK L + FT+   +Y+I+YEG+++  + C
Subjt:  ALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSIQYEGIYVEFMWC

A0A392MA10 CCHC-type domain-containing protein (Fragment)

5.5e-21

44.55

Show/hide

Query:  PWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSIQY
        PW   DHYL ++ WSP F  +  +I + A+WVRI   P+E Y+   +  IG+ IGKT+RVD  TL+ + G +AR+CVEVDLTK L + FT+   +Y+++Y
Subjt:  PWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSIQY

Query:  EGIYVEFMWC
        EG+++    C
Subjt:  EGIYVEFMWC

A0A392MCA2 CCHC-type domain-containing protein

3.2e-21

41.38

Show/hide

Query:  ESPVGRPWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEE
        E+ +  PW   DHYL ++ W P F  +  +I + A+WVRI   P+E Y+   +  IGD IG+T++VD  TL+ + G +AR+CVEVDLTKKL + F++   
Subjt:  ESPVGRPWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEE

Query:  RYSIQYEGIYVEFMWC
        +Y+++YEG+++  + C
Subjt:  RYSIQYEGIYVEFMWC

A0A392NBS2 CCHC-type domain-containing protein (Fragment)

3.2e-21

43.64

Show/hide

Query:  PWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSIQY
        PW   DHYL ++ WSP F  +  +I++  +WVRI   P+E Y+   +K IGD IG+T++VD  TL+ + G +AR+CVEVDLTKKL   F++   +Y+++Y
Subjt:  PWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSIQY

Query:  EGIYVEFMWC
        EG++   + C
Subjt:  EGIYVEFMWC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G01050.1 zinc ion binding;nucleic acid binding

9.5e-18

36.19

Show/hide

Query:  GRPWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSI
        G PW+ L +YL ++ WS RF   +  I    +WVR+ + P   Y+   +  I   +G+ L+VD+ T++ D G FAR+C+EV+L K L+    +  +RY +
Subjt:  GRPWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRVDLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSI

Query:  QYEGI
         YEG+
Subjt:  QYEGI

AT4G29090.1 Ribonuclease H-like superfamily protein

5.4e-05

29.79

Show/hide

Query:  PPPSNCWKINTDATWNVHHGVGGMGWIVQNLRGEGIPTKCCETKANRQIKSL--QILPYIPWIIL-----------FPNECGTLFALFTNPTVW
        PPP    K NTDATWN  +   G+GW+++N +GE    K    +A  ++KS+    L  + W +L           F ++   L  +  N  +W
Subjt:  PPPSNCWKINTDATWNVHHGVGGMGWIVQNLRGEGIPTKCCETKANRQIKSL--QILPYIPWIIL-----------FPNECGTLFALFTNPTVW

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGCACAGAAATAGAGCAATTTTTAGAGGGGAAACTCCAATTGACCAGGATCTATGCAATTCAATAGAGAAATTCAAAGTATACATCAAGCAAGATGAACCAAAATT
TCCAACAGCAGACCTTTCGAGAGCTAGAGTCAATTACCTGATTCACACTCAATCGAATGAGGAAAGAAATCGAACAGTCACAAGTTCGAGTCCTCCACCATCGAATTGCT
GGAAAATCAACACTGATGCTACCTGGAACGTACATCACGGTGTTGGAGGTATGGGTTGGATCGTGCAAAATTTAAGAGGCGAAGGAATTCCAACCAAATGCTGTGAAACA
AAAGCTAACAGACAAATAAAATCACTTCAAATCCTCCCTTATATACCATGGATTATCCTTTTCCCTAACGAATGTGGGACTTTGTTTGCACTTTTTACGAACCCAACAGT
TTGGAACTTAGGAGGATCAGGAGAGAGTCCTGTCGGAAGGCCTTGGAAAGATCTTGACCACTATTTGGCAATGCGAAGCTGGTCCCCTAGATTTATGGCTTCAAAGACGT
CGATTAATAGAGCAGCTTTGTGGGTTCGTATTCTTGACTGCCCGATGGAATTGTACAACGAAATTGGGATGAAGGGAATTGGAGATTTCATTGGCAAAACCTTGAGAGTT
GATTTAAAGACTCTGTCAGGGGACATGGGAAGTTTCGCGAGAATTTGTGTAGAAGTGGATCTCACCAAGAAGCTTCGTTCGGACTTTACAGTGCTGGAGGAGCGGTATAG
TATTCAATACGAAGGAATCTATGTGGAATTTATGTGGTGTGTTTCAATTGTGGAATTTATGGACATAGGGTGGATGAGTGTCCTTTACGAGGTGGAACTTTACCAACTGG
TAAAGAAAAGTCGGCTGCGGTTCCAAATTCTGATGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEHRNRAIFRGETPIDQDLCNSIEKFKVYIKQDEPKFPTADLSRARVNYLIHTQSNEERNRTVTSSSPPPSNCWKINTDATWNVHHGVGGMGWIVQNLRGEGIPTKCCET
KANRQIKSLQILPYIPWIILFPNECGTLFALFTNPTVWNLGGSGESPVGRPWKDLDHYLAMRSWSPRFMASKTSINRAALWVRILDCPMELYNEIGMKGIGDFIGKTLRV
DLKTLSGDMGSFARICVEVDLTKKLRSDFTVLEERYSIQYEGIYVEFMWCVSIVEFMDIGWMSVLYEVELYQLVKKSRLRFQILM

Moc03g20220 (gene) of Bitter gourd (OHB3-1) v2 genome