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Moc03g20440 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g20440
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr3:13804011..13805663
RNA-Seq ExpressionMoc03g20440
SyntenyMoc03g20440
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154947.1 uncharacterized protein LOC111022090 [Momordica charantia]2.6e-2573.42Show/hide
Query:  HIGHDVDGLTPLGSDVVPCNLGDDRVCDWDVLGVWNDNKDESGESYDPLAESEEGHSQAEYGNEEHDDALDDELEPNVE
        H+GHD+ GLTPL SDVVPCNLGDDRVCDW+V G+WNDN+DES ESYDPL ESEEG  +AE+ N+++DDALD+E EP+VE
Subjt:  HIGHDVDGLTPLGSDVVPCNLGDDRVCDWDVLGVWNDNKDESGESYDPLAESEEGHSQAEYGNEEHDDALDDELEPNVE

XP_022155970.1 uncharacterized protein LOC111022954 [Momordica charantia]1.3e-2165.82Show/hide
Query:  HIGHDVDGLTPLGSDVVPCNLGDDRVCDWDVLGVWNDNKDESGESYDPLAESEEGHSQAEYGNEEHDDALDDELEPNVE
        H+GHD+ GLTPL SDVVPCNLGDDRVC W++ G+WNDN+DES ESYD L +SEEG  +AE+ N+++DDA D++ EP+VE
Subjt:  HIGHDVDGLTPLGSDVVPCNLGDDRVCDWDVLGVWNDNKDESGESYDPLAESEEGHSQAEYGNEEHDDALDDELEPNVE

XP_022156328.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023249 [Momordica charantia]3.1e-2675.9Show/hide
Query:  NLNLHIGHDVDGLTPLGSDVVPCNLGDDRVCDWDVLGVWNDNKDESGESYDPLAESEEGHSQAEYGNEEHDDALDDELEPNVE
        N+   I   V        +VVPCNLGDDRVCDWDV GVWNDN+DESGESYDPLAES+EGHSQAEYGNEEHDDALDDELEP+VE
Subjt:  NLNLHIGHDVDGLTPLGSDVVPCNLGDDRVCDWDVLGVWNDNKDESGESYDPLAESEEGHSQAEYGNEEHDDALDDELEPNVE

XP_022157017.1 uncharacterized protein LOC111023843 [Momordica charantia]2.2e-3292.21Show/hide
Query:  GHDVDGLTPLGSDVVPCNLGDDRVCDWDVLGVWNDNKDESGESYDPLAESEEGHSQAEYGNEEHDDALDDELEPNVE
        GHDV+GLTPLGSDVVPCNLGDDRVCDWDV GVWNDN+DESGESYDPLA SEEGHSQAEYGNEEHDDALDDELE +VE
Subjt:  GHDVDGLTPLGSDVVPCNLGDDRVCDWDVLGVWNDNKDESGESYDPLAESEEGHSQAEYGNEEHDDALDDELEPNVE

TrEMBL top hitse value%identityAlignment
A0A6J1DN26 uncharacterized protein LOC1110220901.3e-2573.42Show/hide
Query:  HIGHDVDGLTPLGSDVVPCNLGDDRVCDWDVLGVWNDNKDESGESYDPLAESEEGHSQAEYGNEEHDDALDDELEPNVE
        H+GHD+ GLTPL SDVVPCNLGDDRVCDW+V G+WNDN+DES ESYDPL ESEEG  +AE+ N+++DDALD+E EP+VE
Subjt:  HIGHDVDGLTPLGSDVVPCNLGDDRVCDWDVLGVWNDNKDESGESYDPLAESEEGHSQAEYGNEEHDDALDDELEPNVE

A0A6J1DP00 uncharacterized protein LOC1110229546.5e-2265.82Show/hide
Query:  HIGHDVDGLTPLGSDVVPCNLGDDRVCDWDVLGVWNDNKDESGESYDPLAESEEGHSQAEYGNEEHDDALDDELEPNVE
        H+GHD+ GLTPL SDVVPCNLGDDRVC W++ G+WNDN+DES ESYD L +SEEG  +AE+ N+++DDA D++ EP+VE
Subjt:  HIGHDVDGLTPLGSDVVPCNLGDDRVCDWDVLGVWNDNKDESGESYDPLAESEEGHSQAEYGNEEHDDALDDELEPNVE

A0A6J1DQB9 Reverse transcriptase1.5e-2675.9Show/hide
Query:  NLNLHIGHDVDGLTPLGSDVVPCNLGDDRVCDWDVLGVWNDNKDESGESYDPLAESEEGHSQAEYGNEEHDDALDDELEPNVE
        N+   I   V        +VVPCNLGDDRVCDWDV GVWNDN+DESGESYDPLAES+EGHSQAEYGNEEHDDALDDELEP+VE
Subjt:  NLNLHIGHDVDGLTPLGSDVVPCNLGDDRVCDWDVLGVWNDNKDESGESYDPLAESEEGHSQAEYGNEEHDDALDDELEPNVE

A0A6J1DTG5 uncharacterized protein LOC1110238431.1e-3292.21Show/hide
Query:  GHDVDGLTPLGSDVVPCNLGDDRVCDWDVLGVWNDNKDESGESYDPLAESEEGHSQAEYGNEEHDDALDDELEPNVE
        GHDV+GLTPLGSDVVPCNLGDDRVCDWDV GVWNDN+DESGESYDPLA SEEGHSQAEYGNEEHDDALDDELE +VE
Subjt:  GHDVDGLTPLGSDVVPCNLGDDRVCDWDVLGVWNDNKDESGESYDPLAESEEGHSQAEYGNEEHDDALDDELEPNVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCTGCGATTTTTTGGTAGAGAAGAAGAGAAGAAACAGAATACAGTGACTGTCTACCGCCGTTTTTACGAGCAGACCGCCCTCTCAGAAATTGGATTTTTG
GGTCGAAGGATTGGGGAATTTGAATTTGTCACCCCGGATTTTTGGGTCGAAGGATCGGAGAATTTGAATTTGCATATAGGTCATGATGTAGACGGTTTAACACCA
TTGGGGTCAGATGTTGTTCCATGTAATCTGGGAGATGATAGGGTGTGTGATTGGGATGTGTTGGGAGTATGGAATGATAACAAAGATGAAAGTGGTGAATCATAT
GACCCGTTGGCAGAGTCTGAAGAAGGACACTCTCAAGCAGAATATGGGAACGAAGAGCATGACGATGCACTTGATGATGAGCTTGAGCCTAATGTGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGCTGCGATTTTTTGGTAGAGAAGAAGAGAAGAAACAGAATACAGTGACTGTCTACCGCCGTTTTTACGAGCAGACCGCCCTCTCAGAAATTGGATTTTTG
GGTCGAAGGATTGGGGAATTTGAATTTGTCACCCCGGATTTTTGGGTCGAAGGATCGGAGAATTTGAATTTGCATATAGGTCATGATGTAGACGGTTTAACACCA
TTGGGGTCAGATGTTGTTCCATGTAATCTGGGAGATGATAGGGTGTGTGATTGGGATGTGTTGGGAGTATGGAATGATAACAAAGATGAAAGTGGTGAATCATAT
GACCCGTTGGCAGAGTCTGAAGAAGGACACTCTCAAGCAGAATATGGGAACGAAGAGCATGACGATGCACTTGATGATGAGCTTGAGCCTAATGTGGAATAG
Protein sequenceShow/hide protein sequence
MLLRFFGREEEKKQNTVTVYRRFYEQTALSEIGFLGRRIGEFEFVTPDFWVEGSENLNLHIGHDVDGLTPLGSDVVPCNLGDDRVCDWDVLGVWNDNKDESGESY
DPLAESEEGHSQAEYGNEEHDDALDDELEPNVE