; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g20560 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g20560
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPMD domain-containing protein
Genome locationchr3:13972218..13974345
RNA-Seq ExpressionMoc03g20560
SyntenyMoc03g20560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34118.1 hypothetical protein [Cucumis melo subsp. melo]1.5e-3449.66Show/hide
Query:  LRCLLSH------HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFI
        +RC+  H      HGWLAHYF TH+     VRGP M ++SGEGG+ +F E  AR++IH G  I WH+ LQ+R++ E +      SF  +S F S+RSC++
Subjt:  LRCLLSH------HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFI

Query:  SSRCSSSMVIEAYSSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL
        SSRC ++ +I +YS YR GRQFGFYQD+P D+G   P I LDN+L
Subjt:  SSRCSSSMVIEAYSSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]7.4e-3452.27Show/hide
Query:  HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFISSRCSSSMVIEAY
        HGWLAHYF TH+     VRGP M ++S EGG+ +F E  AR++IH G  I WH++LQ+R++ E +      SF   S F S+RSC++SSRC ++ +I +Y
Subjt:  HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFISSRCSSSMVIEAY

Query:  SSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL
        S YRFGRQFGFYQD+P D+G   P I LDN+L
Subjt:  SSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]8.7e-3553.03Show/hide
Query:  HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFISSRCSSSMVIEAY
        HGWLAHYF TH+     VRGP M ++SG GG+ +F E  AR++IH G  I WH+ LQ+R++ E +      SF  +S F S+RSC++SSRC ++ +I +Y
Subjt:  HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFISSRCSSSMVIEAY

Query:  SSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL
        SSYRFGRQFGFYQD+P D+G   P I LDN+L
Subjt:  SSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]8.7e-3553.03Show/hide
Query:  HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFISSRCSSSMVIEAY
        HGWLAHYF TH+     VRGP M ++SGEGG+ +F E  AR++IH G  I WH+ L +RN+ E +      SF  +S F S+RSC++SSRC ++ +I +Y
Subjt:  HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFISSRCSSSMVIEAY

Query:  SSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL
        S YRFGRQFGFYQD+P D+G   P I LDN+L
Subjt:  SSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]5.1e-3556.49Show/hide
Query:  HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFISSRCSSSMVIEAY
        HGWLA YF TH+K    +RGP MV++SGEGGAK+++ + AR  IH GK +SWH+ L ++N+DE L  + +L   + S F S+RSCF+SS+C SS VIE Y
Subjt:  HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFISSRCSSSMVIEAY

Query:  SSYRFGRQFGFYQDIPKDLGEEVPRINLDNV
        S  RF RQFGFYQD+P DLGEE+P  N  NV
Subjt:  SSYRFGRQFGFYQDIPKDLGEEVPRINLDNV

TrEMBL top hitse value%identityAlignment
A0A5A7TX42 Uncharacterized protein3.6e-3452.27Show/hide
Query:  HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFISSRCSSSMVIEAY
        HGWLAHYF TH+     VRGP M ++S EGG+ +F E  AR++IH G  I WH++LQ+R++ E +      SF   S F S+RSC++SSRC ++ +I +Y
Subjt:  HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFISSRCSSSMVIEAY

Query:  SSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL
        S YRFGRQFGFYQD+P D+G   P I LDN+L
Subjt:  SSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL

A0A5A7U8L3 PMD domain-containing protein4.2e-3553.03Show/hide
Query:  HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFISSRCSSSMVIEAY
        HGWLAHYF TH+     VRGP M ++SG GG+ +F E  AR++IH G  I WH+ LQ+R++ E +      SF  +S F S+RSC++SSRC ++ +I +Y
Subjt:  HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFISSRCSSSMVIEAY

Query:  SSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL
        SSYRFGRQFGFYQD+P D+G   P I LDN+L
Subjt:  SSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL

A0A5A7UGW6 PMD domain-containing protein4.2e-3553.03Show/hide
Query:  HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFISSRCSSSMVIEAY
        HGWLAHYF TH+     VRGP M ++SGEGG+ +F E  AR++IH G  I WH+ L +RN+ E +      SF  +S F S+RSC++SSRC ++ +I +Y
Subjt:  HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFISSRCSSSMVIEAY

Query:  SSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL
        S YRFGRQFGFYQD+P D+G   P I LDN+L
Subjt:  SSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL

A0A5D3C3D7 PMD domain-containing protein8.0e-3451.52Show/hide
Query:  HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFISSRCSSSMVIEAY
        HGWLAHYF TH+     VRGP M ++SG+G + +F E  AR++IH G  I WH+ LQ+R++ E +      SF  +S F S+RSC++SSRC ++ +I +Y
Subjt:  HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFISSRCSSSMVIEAY

Query:  SSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL
        S YRFGRQFGFYQD+P D+G   P I LDN+L
Subjt:  SSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL

E5GCB9 PMD domain-containing protein7.2e-3549.66Show/hide
Query:  LRCLLSH------HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFI
        +RC+  H      HGWLAHYF TH+     VRGP M ++SGEGG+ +F E  AR++IH G  I WH+ LQ+R++ E +      SF  +S F S+RSC++
Subjt:  LRCLLSH------HGWLAHYFPTHFKTLMPVRGPMMVDYSGEGGAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFI

Query:  SSRCSSSMVIEAYSSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL
        SSRC ++ +I +YS YR GRQFGFYQD+P D+G   P I LDN+L
Subjt:  SSRCSSSMVIEAYSSYRFGRQFGFYQDIPKDLGEEVPRINLDNVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCATCTAAAGATGGTGTTGGTTTATGAGTATCTGTCAAGTTGTGGATCTCTTTCTGGTTTAAAGGAGATCGAAAATATGCACAGCTGCATCCTTGAAGGGCACAT
AAAACTTCTCGACCTTGTTCAACCCAAAATCCGGATGGGACTCCTTCGTTTTGGCCAACATTTATCGTGGGCTCGATCATATCCACGATTCGTCAACTTCAGTTGGGAAC
TCAGGTGCTTGCTTTCCCATCATGGTTGGCTTGCTCATTATTTTCCTACACATTTTAAAACTCTCATGCCAGTTAGAGGTCCGATGATGGTTGATTATTCTGGAGAAGGT
GGAGCTAAATTCTTCAGCGAGGTTGCTGCTCGGGACATGATTCACATGGGTAAATGTATATCATGGCATTCGACTCTTCAATCCAGAAATAGAGATGAACATCTGAAAGG
TAATGAAAAACTTTCATTTCGGGATTTGTCACTCTTCTCAAGTCTAAGGTCATGCTTCATATCGTCACGATGTTCAAGTTCAATGGTAATTGAGGCTTATAGTTCTTATC
GGTTTGGTCGACAGTTCGGGTTTTATCAAGATATACCGAAGGACTTGGGTGAAGAGGTTCCTCGAATTAACTTGGATAACGTATTACTTGTCCCTGGCGTCGAAAATTTC
AAGGTGCCAACTGACAGAGTTGTAACTCCTTCTCATCCTTTGCCTGCAATTGTTGAGGATTCTACACTAGCCAAGAAGATGGTGCATGTTGTCATGCATGAAGTCTCTGA
CCTTTATGCAGTTAAGATGTCATACAATGAGAAACATGCCCTTATAGAGAAGAACAAACTTCAACAACAACATGCACAACTACTGCCACAGGAAGAAGAGTTGGAAGTCA
AGCTTAAAGTTGTCCAAACTCAGCAAGATGTCGGATCACTTATTGAGACCTATCGTGAAATTTTGGAGGACGCGCAACAAGAGTTGAAGGACTTCAAGTGGATGCCGCAA
TTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGCATCTAAAGATGGTGTTGGTTTATGAGTATCTGTCAAGTTGTGGATCTCTTTCTGGTTTAAAGGAGATCGAAAATATGCACAGCTGCATCCTTGAAGGGCACAT
AAAACTTCTCGACCTTGTTCAACCCAAAATCCGGATGGGACTCCTTCGTTTTGGCCAACATTTATCGTGGGCTCGATCATATCCACGATTCGTCAACTTCAGTTGGGAAC
TCAGGTGCTTGCTTTCCCATCATGGTTGGCTTGCTCATTATTTTCCTACACATTTTAAAACTCTCATGCCAGTTAGAGGTCCGATGATGGTTGATTATTCTGGAGAAGGT
GGAGCTAAATTCTTCAGCGAGGTTGCTGCTCGGGACATGATTCACATGGGTAAATGTATATCATGGCATTCGACTCTTCAATCCAGAAATAGAGATGAACATCTGAAAGG
TAATGAAAAACTTTCATTTCGGGATTTGTCACTCTTCTCAAGTCTAAGGTCATGCTTCATATCGTCACGATGTTCAAGTTCAATGGTAATTGAGGCTTATAGTTCTTATC
GGTTTGGTCGACAGTTCGGGTTTTATCAAGATATACCGAAGGACTTGGGTGAAGAGGTTCCTCGAATTAACTTGGATAACGTATTACTTGTCCCTGGCGTCGAAAATTTC
AAGGTGCCAACTGACAGAGTTGTAACTCCTTCTCATCCTTTGCCTGCAATTGTTGAGGATTCTACACTAGCCAAGAAGATGGTGCATGTTGTCATGCATGAAGTCTCTGA
CCTTTATGCAGTTAAGATGTCATACAATGAGAAACATGCCCTTATAGAGAAGAACAAACTTCAACAACAACATGCACAACTACTGCCACAGGAAGAAGAGTTGGAAGTCA
AGCTTAAAGTTGTCCAAACTCAGCAAGATGTCGGATCACTTATTGAGACCTATCGTGAAATTTTGGAGGACGCGCAACAAGAGTTGAAGGACTTCAAGTGGATGCCGCAA
TTTTAG
Protein sequenceShow/hide protein sequence
MLHLKMVLVYEYLSSCGSLSGLKEIENMHSCILEGHIKLLDLVQPKIRMGLLRFGQHLSWARSYPRFVNFSWELRCLLSHHGWLAHYFPTHFKTLMPVRGPMMVDYSGEG
GAKFFSEVAARDMIHMGKCISWHSTLQSRNRDEHLKGNEKLSFRDLSLFSSLRSCFISSRCSSSMVIEAYSSYRFGRQFGFYQDIPKDLGEEVPRINLDNVLLVPGVENF
KVPTDRVVTPSHPLPAIVEDSTLAKKMVHVVMHEVSDLYAVKMSYNEKHALIEKNKLQQQHAQLLPQEEELEVKLKVVQTQQDVGSLIETYREILEDAQQELKDFKWMPQ
F