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Moc03g20580 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g20580
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr3:13995728..13996285
RNA-Seq ExpressionMoc03g20580
SyntenyMoc03g20580
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8394159.1 hypothetical protein HHK36_020365 [Tetracentron sinense]4.3e-4758.96Show/hide
Query:  DRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARLR
        D+P +TPE+PN+++IEKWDRSNRM LMI+KRSIS+ F   I ES + +  L+E++Q FA+NE +EA +LL KLV M+Y  KG NIREYIMEM+ LA++L+
Subjt:  DRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARLR

Query:  TLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEK
        +LKLE+SEDLL+H V +SLP  + Q KV YNTQK+KW+L ELIS+CV EEER +R++TE+   AST Q ++ K
Subjt:  TLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEK

KAF8413461.1 hypothetical protein HHK36_001448 [Tetracentron sinense]1.6e-4658.38Show/hide
Query:  DRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARLR
        D+P +TPE+PN+++IEKWDRSNRM LMI+KRSI + F   I E  + +  L+E++Q FA+NE +EA +LL KLV M+Y  KG NIREYIMEM+ LA++L+
Subjt:  DRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARLR

Query:  TLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEK
        +LKLE+SEDLL+H VL+SLP  + Q KV YNTQK+KW+L ELIS+CV EEER +R++TE    AST Q ++ K
Subjt:  TLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEK

XP_022157933.1 uncharacterized protein LOC111024541 [Momordica charantia]8.5e-96100Show/hide
Query:  MDRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARL
        MDRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARL
Subjt:  MDRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARL

Query:  RTLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEKEGAGRHWRREG
        RTLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEKEGAGRHWRREG
Subjt:  RTLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEKEGAGRHWRREG

XP_024029782.1 uncharacterized protein LOC112094049 [Morus notabilis]2.8e-4660.12Show/hide
Query:  DRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARLR
        +RP +T ++ N  +IEKWDRSNRMSLMI+KRSI + F   I ESTN +  LKELEQ FA+NE +E  +LL KL+ MRY   G NIREYIMEM+++A +L+
Subjt:  DRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARLR

Query:  TLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEK
         L LE+SEDLL+H VL+ LPT+Y+Q KV YN QKEKWT+ ELISYCV EEERL+R++TE+   AST Q K ++
Subjt:  TLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEK

XP_038895752.1 uncharacterized protein LOC120083916 [Benincasa hispida]1.5e-6070.69Show/hide
Query:  MDRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARL
        MDRPISTP++PND +I+KWDRSNRMSLMIIKRSI +++ +LI+ES N +  LKELEQ FA+NEN EA DLLTKLV MRYT KG NIREYI+EM+SLA +L
Subjt:  MDRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARL

Query:  RTLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEK
        + LKLE+ EDLL+HFVLMSLPT+Y QLKVCYNTQK KWTL ELIS+CV EEER+++EE+E+D   ST +GK++K
Subjt:  RTLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEK

TrEMBL top hitse value%identityAlignment
A0A151RB35 Retrovirus-related Pol polyprotein from transposon TNT 1-945.6e-4556.07Show/hide
Query:  DRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARLR
        ++P   PE+P++ ++EKW+RSNRM LMI+KRS+ ++F   I ES N +  L  +EQ F  NE A+A  LL KL++MRY  KG NIREYIMEM++LA++L+
Subjt:  DRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARLR

Query:  TLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEK
         LKLE+S+DLL+H VL+SLPT + Q KV YNTQK+KWTL ELIS+CV EEER +RE+TE+   AS+ Q ++ K
Subjt:  TLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEK

A0A151RDF9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment)4.3e-4556.65Show/hide
Query:  DRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARLR
        ++P   PE+P++ ++EKW+RSNRM LMI+KRS+ ++F D I ES N + LL  +EQ F  NE A+A  LL KL++MR   KG NIREYIMEM++LA++L+
Subjt:  DRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARLR

Query:  TLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEK
         LKLE+S+DLL+H VL+SLPT + Q KV YNTQK+KWTL ELIS+CV EEER +RE+TE+   AS+ Q ++ K
Subjt:  TLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEK

A0A445JVF2 Retrovirus-related Pol polyprotein from transposon TNT 1-944.3e-4555.06Show/hide
Query:  MDRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARL
        M+RPISTPE  N+++IEKWDRSNRM LMI+KRS+ ++F   I +  + +  LKE+EQ F +NE  E  +LL KL++M+Y  KG NIREYIMEM++L ++L
Subjt:  MDRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARL

Query:  RTLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEKEGAG
         +LKLE+ ED+L+H VL+S P  + Q KV YNTQK+KW+L ELIS+CV EEERL+R+ TE+    ST Q K+ K+  G
Subjt:  RTLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEKEGAG

A0A445LAJ7 Uncharacterized protein1.9e-4559.04Show/hide
Query:  DRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARLR
        +RPISTPE  N+++IEKWDRSNRM LMI+KRSI + F   I E  + +  L+E+EQ FA+NE AE  +LL KL++M+Y  KG NIREYIMEM +LA++L+
Subjt:  DRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARLR

Query:  TLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSAST
        +LKLE+ EDL +H VL+SLP  + Q KV YNTQK+KW+L ELIS+CV EEERL+R+ TE+    ST
Subjt:  TLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSAST

A0A6J1DUQ1 uncharacterized protein LOC1110245414.1e-96100Show/hide
Query:  MDRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARL
        MDRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARL
Subjt:  MDRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARL

Query:  RTLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEKEGAGRHWRREG
        RTLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEKEGAGRHWRREG
Subjt:  RTLKLEVSEDLLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEKEGAGRHWRREG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53670.1 unknown protein7.8e-1532.78Show/hide
Query:  MDRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILES-TNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAAR
        +D  + T    +  +++ WDRSNR+S+MI+K  I + F  ++ +  T  +  L  LE  FA+NE AE   +  +  +M Y E   N+RE IM M +L A+
Subjt:  MDRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILES-TNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAAR

Query:  LRTLKLE--VSEDLLI-HFVLMSLPTRYNQLKVCYNTQKEK-------------WTLVELISYCVGEEERLRREETETDR
         + L +    S D+++ H  +  LP +Y  LK  Y+  + K             W+  ELIS C  EEE LR E  +  R
Subjt:  LRTLKLE--VSEDLLI-HFVLMSLPTRYNQLKVCYNTQKEK-------------WTLVELISYCVGEEERLRREETETDR

AT5G53690.1 unknown protein9.6e-0548.94Show/hide
Query:  VLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETD
        VL SLP+ Y+ L+  Y+  K +W+  +LIS+CV EEERL  E+ E D
Subjt:  VLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGCCCCATTTCCACTCCAGAAGATCCCAACGATATGCAAATCGAGAAATGGGATCGATCCAATCGCATGAGTCTGATGATCATCAAGCGCTCAATTTCAAAGAT
GTTTCATGACTTGATACTCGAGAGCACGAACGTTAGAGCACTCCTTAAGGAACTAGAGCAGTGCTTTGCTAGAAATGAAAATGCAGAGGCAGGAGACCTTTTGACTAAGC
TTGTCACTATGAGGTATACTGAGAAAGGCAACAACATAAGGGAATATATAATGGAAATGGCTAGTCTAGCTGCAAGACTTAGAACACTGAAGTTGGAGGTTTCTGAAGAC
CTTCTTATACACTTTGTTTTGATGTCTCTTCCTACACGATATAACCAACTTAAAGTGTGTTACAATACTCAGAAAGAAAAATGGACTCTAGTCGAACTGATTTCTTACTG
TGTGGGAGAAGAGGAACGGTTGCGGCGGGAAGAAACCGAAACTGATCGTTCAGCATCTACCTTCCAAGGCAAGGAAGAAAAAGAGGGAGCGGGAAGACATTGGAGACGCG
AAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCGCCCCATTTCCACTCCAGAAGATCCCAACGATATGCAAATCGAGAAATGGGATCGATCCAATCGCATGAGTCTGATGATCATCAAGCGCTCAATTTCAAAGAT
GTTTCATGACTTGATACTCGAGAGCACGAACGTTAGAGCACTCCTTAAGGAACTAGAGCAGTGCTTTGCTAGAAATGAAAATGCAGAGGCAGGAGACCTTTTGACTAAGC
TTGTCACTATGAGGTATACTGAGAAAGGCAACAACATAAGGGAATATATAATGGAAATGGCTAGTCTAGCTGCAAGACTTAGAACACTGAAGTTGGAGGTTTCTGAAGAC
CTTCTTATACACTTTGTTTTGATGTCTCTTCCTACACGATATAACCAACTTAAAGTGTGTTACAATACTCAGAAAGAAAAATGGACTCTAGTCGAACTGATTTCTTACTG
TGTGGGAGAAGAGGAACGGTTGCGGCGGGAAGAAACCGAAACTGATCGTTCAGCATCTACCTTCCAAGGCAAGGAAGAAAAAGAGGGAGCGGGAAGACATTGGAGACGCG
AAGGCTAA
Protein sequenceShow/hide protein sequence
MDRPISTPEDPNDMQIEKWDRSNRMSLMIIKRSISKMFHDLILESTNVRALLKELEQCFARNENAEAGDLLTKLVTMRYTEKGNNIREYIMEMASLAARLRTLKLEVSED
LLIHFVLMSLPTRYNQLKVCYNTQKEKWTLVELISYCVGEEERLRREETETDRSASTFQGKEEKEGAGRHWRREG