; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g20690 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g20690
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:14107931..14111322
RNA-Seq ExpressionMoc03g20690
SyntenyMoc03g20690
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150861.1 uncharacterized protein LOC111018906 [Momordica charantia]1.7e-6480.47Show/hide
Query:  NILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVST
        NILSL TYLALGWTRS+LKKS TPLVGFSGE VSPEGCIDLPV IGQD TQVTQMAEFVVI GRSAYNAIFGRPIIHSFR V STLHQV+KYSTPNGV T
Subjt:  NILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVST

Query:  VRGEQKTSRERYASALKGSSVCALEEQTSQDDLP-------RVSKRQFSPPTEELELVPLLSPEKQISI
        VRGEQKTSRE YASALKGSSV ALEEQ S D+LP       + SKR+FS PTE+LELVPLLSP++Q+ +
Subjt:  VRGEQKTSRERYASALKGSSVCALEEQTSQDDLP-------RVSKRQFSPPTEELELVPLLSPEKQISI

XP_022152110.1 uncharacterized protein LOC111019899 [Momordica charantia]5.0e-6477.78Show/hide
Query:  ANILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVS
        ANILSLPTYLALGWTRS+LKKS TPLVGFSGESV PEGCIDLPVT+GQD T+VTQMAEFVV+DGRSAYNAIFGRPIIHSFR +PSTLHQV+KYSTPNGV 
Subjt:  ANILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVS

Query:  TVRGEQKTSRERYASALKGSSVCALEEQTSQD-------DLPRVSKRQFSPPTEELELVPLLSPEKQISIG
        TVRGEQ  SRE YAS LKG+SVCALE  TS+D       DLP    R+F+ P EELELVPLLS EKQ+ +G
Subjt:  TVRGEQKTSRERYASALKGSSVCALEEQTSQD-------DLPRVSKRQFSPPTEELELVPLLSPEKQISIG

XP_022152367.1 uncharacterized protein LOC111020111 [Momordica charantia]4.7e-7086.96Show/hide
Query:  ANILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVS
        ANILSLPTYLALGWTRS+LKKS TPLVGFSGESVSPEGCIDLPVT+GQDATQVTQMAEFVVIDGR AYNAIFGRPIIHSFR VPSTLHQV+KYSTPNGV 
Subjt:  ANILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVS

Query:  TVRGEQKTSRERYASALKGSSVCALEEQTSQDDLPRVSKRQFSPPTEELELVPLLSPEKQI
        TVRGEQKTSRE YAS LKGSSVC LEEQ +QDD PR  KRQFSP  EELELVPLLSP + +
Subjt:  TVRGEQKTSRERYASALKGSSVCALEEQTSQDDLPRVSKRQFSPPTEELELVPLLSPEKQI

XP_022154846.1 uncharacterized protein LOC111022006 [Momordica charantia]5.2e-8581.95Show/hide
Query:  ANILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVS
        ANI SLPTYLALGWTRS+LKKS TPLVGFSGESVSPEGCIDL VTIGQDATQVTQMAEFVVID +SAYNAIFGRPIIHSF  V STLHQV+KYST NGV 
Subjt:  ANILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVS

Query:  TVRGEQKTSRERYASALKGSSVCALEEQT-------SQDDLPRVSKRQFSPPTEELELVPLLSPEKQISIGTKLGATDREELINFLRSNSNVFSWSHEDM
        TVRGEQKTSR+ YAS LKG +VC LEEQT       S+ DLP+ SKRQFSPPTEELELVPLLSPEK ++IGTKL ATDR+ELINFLRSNS+VF+WSHEDM
Subjt:  TVRGEQKTSRERYASALKGSSVCALEEQT-------SQDDLPRVSKRQFSPPTEELELVPLLSPEKQISIGTKLGATDREELINFLRSNSNVFSWSHEDM

Query:  SGIDP
         GIDP
Subjt:  SGIDP

XP_022157676.1 uncharacterized protein LOC111024332 [Momordica charantia]4.7e-6278.18Show/hide
Query:  ANILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVS
        ANILSLPTYLALGWTRS+LK+S TPLVGFSGESV PEGCIDLPVT+GQD T+VTQM EFVV+DGRS YNAIFGRPIIHSFR +PSTLHQV+KYSTPNGV 
Subjt:  ANILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVS

Query:  TVRGEQKTSRERYASALKGSSVCALEEQTS-----QDDLPRVSKRQFSPPTEELELVPLLSPEKQ
        TVRGEQ  SRE YA+ALKGSSVCALE         + DLPR   ++F+ PTEELELVPLLSPEKQ
Subjt:  TVRGEQKTSRERYASALKGSSVCALEEQTS-----QDDLPRVSKRQFSPPTEELELVPLLSPEKQ

TrEMBL top hitse value%identityAlignment
A0A6J1DCR3 uncharacterized protein LOC1110189068.4e-6580.47Show/hide
Query:  NILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVST
        NILSL TYLALGWTRS+LKKS TPLVGFSGE VSPEGCIDLPV IGQD TQVTQMAEFVVI GRSAYNAIFGRPIIHSFR V STLHQV+KYSTPNGV T
Subjt:  NILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVST

Query:  VRGEQKTSRERYASALKGSSVCALEEQTSQDDLP-------RVSKRQFSPPTEELELVPLLSPEKQISI
        VRGEQKTSRE YASALKGSSV ALEEQ S D+LP       + SKR+FS PTE+LELVPLLSP++Q+ +
Subjt:  VRGEQKTSRERYASALKGSSVCALEEQTSQDDLP-------RVSKRQFSPPTEELELVPLLSPEKQISI

A0A6J1DD03 uncharacterized protein LOC1110198992.4e-6477.78Show/hide
Query:  ANILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVS
        ANILSLPTYLALGWTRS+LKKS TPLVGFSGESV PEGCIDLPVT+GQD T+VTQMAEFVV+DGRSAYNAIFGRPIIHSFR +PSTLHQV+KYSTPNGV 
Subjt:  ANILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVS

Query:  TVRGEQKTSRERYASALKGSSVCALEEQTSQD-------DLPRVSKRQFSPPTEELELVPLLSPEKQISIG
        TVRGEQ  SRE YAS LKG+SVCALE  TS+D       DLP    R+F+ P EELELVPLLS EKQ+ +G
Subjt:  TVRGEQKTSRERYASALKGSSVCALEEQTSQD-------DLPRVSKRQFSPPTEELELVPLLSPEKQISIG

A0A6J1DG07 uncharacterized protein LOC1110201112.3e-7086.96Show/hide
Query:  ANILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVS
        ANILSLPTYLALGWTRS+LKKS TPLVGFSGESVSPEGCIDLPVT+GQDATQVTQMAEFVVIDGR AYNAIFGRPIIHSFR VPSTLHQV+KYSTPNGV 
Subjt:  ANILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVS

Query:  TVRGEQKTSRERYASALKGSSVCALEEQTSQDDLPRVSKRQFSPPTEELELVPLLSPEKQI
        TVRGEQKTSRE YAS LKGSSVC LEEQ +QDD PR  KRQFSP  EELELVPLLSP + +
Subjt:  TVRGEQKTSRERYASALKGSSVCALEEQTSQDDLPRVSKRQFSPPTEELELVPLLSPEKQI

A0A6J1DPX9 uncharacterized protein LOC1110220062.5e-8581.95Show/hide
Query:  ANILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVS
        ANI SLPTYLALGWTRS+LKKS TPLVGFSGESVSPEGCIDL VTIGQDATQVTQMAEFVVID +SAYNAIFGRPIIHSF  V STLHQV+KYST NGV 
Subjt:  ANILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVS

Query:  TVRGEQKTSRERYASALKGSSVCALEEQT-------SQDDLPRVSKRQFSPPTEELELVPLLSPEKQISIGTKLGATDREELINFLRSNSNVFSWSHEDM
        TVRGEQKTSR+ YAS LKG +VC LEEQT       S+ DLP+ SKRQFSPPTEELELVPLLSPEK ++IGTKL ATDR+ELINFLRSNS+VF+WSHEDM
Subjt:  TVRGEQKTSRERYASALKGSSVCALEEQT-------SQDDLPRVSKRQFSPPTEELELVPLLSPEKQISIGTKLGATDREELINFLRSNSNVFSWSHEDM

Query:  SGIDP
         GIDP
Subjt:  SGIDP

A0A6J1DYW5 uncharacterized protein LOC1110243322.3e-6278.18Show/hide
Query:  ANILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVS
        ANILSLPTYLALGWTRS+LK+S TPLVGFSGESV PEGCIDLPVT+GQD T+VTQM EFVV+DGRS YNAIFGRPIIHSFR +PSTLHQV+KYSTPNGV 
Subjt:  ANILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPSTLHQVMKYSTPNGVS

Query:  TVRGEQKTSRERYASALKGSSVCALEEQTS-----QDDLPRVSKRQFSPPTEELELVPLLSPEKQ
        TVRGEQ  SRE YA+ALKGSSVCALE         + DLPR   ++F+ PTEELELVPLLSPEKQ
Subjt:  TVRGEQKTSRERYASALKGSSVCALEEQTS-----QDDLPRVSKRQFSPPTEELELVPLLSPEKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCTAACCCGTTCTCTTTCAAGATTGGGGAGCAATACTCAGTCAATTCCACAAGGAAAAACGAGCATTGCCAATATCTTGTCCCTCCCAACATATCTAGCATTGGG
GTGGACCAGGTCACGGCTGAAAAAAAGTTCAACACCGTTGGTTGGATTCTCTGGAGAATCGGTCTCCCCAGAAGGGTGTATTGACCTGCCGGTCACGATCGGACAAGATG
CTACCCAAGTAACGCAGATGGCTGAGTTTGTAGTGATCGATGGCAGGTCGGCTTACAACGCCATCTTTGGGAGACCTATCATCCACTCATTCCGGACCGTCCCTTCCACA
CTGCATCAAGTCATGAAGTATTCAACCCCTAATGGAGTCAGCACGGTCCGAGGTGAGCAAAAGACTTCAAGGGAGCGTTACGCATCCGCGCTCAAAGGGTCGTCAGTATG
TGCCCTGGAAGAGCAAACTAGTCAAGACGACCTTCCGAGGGTAAGCAAAAGGCAGTTCTCCCCACCAACAGAGGAGCTCGAGCTCGTTCCCTTGCTTAGCCCTGAAAAAC
AAATAAGCATAGGAACCAAGCTGGGGGCCACTGACAGGGAAGAACTGATCAACTTCCTCAGGTCCAACTCGAACGTCTTTTCATGGTCTCACGAGGACATGTCTGGCATC
GACCCAAAGATCGGTCCCGATCGAGATCTTGGACAACCCTTCAATCTTGGAGCCAGATGTGATGGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCCTAACCCGTTCTCTTTCAAGATTGGGGAGCAATACTCAGTCAATTCCACAAGGAAAAACGAGCATTGCCAATATCTTGTCCCTCCCAACATATCTAGCATTGGG
GTGGACCAGGTCACGGCTGAAAAAAAGTTCAACACCGTTGGTTGGATTCTCTGGAGAATCGGTCTCCCCAGAAGGGTGTATTGACCTGCCGGTCACGATCGGACAAGATG
CTACCCAAGTAACGCAGATGGCTGAGTTTGTAGTGATCGATGGCAGGTCGGCTTACAACGCCATCTTTGGGAGACCTATCATCCACTCATTCCGGACCGTCCCTTCCACA
CTGCATCAAGTCATGAAGTATTCAACCCCTAATGGAGTCAGCACGGTCCGAGGTGAGCAAAAGACTTCAAGGGAGCGTTACGCATCCGCGCTCAAAGGGTCGTCAGTATG
TGCCCTGGAAGAGCAAACTAGTCAAGACGACCTTCCGAGGGTAAGCAAAAGGCAGTTCTCCCCACCAACAGAGGAGCTCGAGCTCGTTCCCTTGCTTAGCCCTGAAAAAC
AAATAAGCATAGGAACCAAGCTGGGGGCCACTGACAGGGAAGAACTGATCAACTTCCTCAGGTCCAACTCGAACGTCTTTTCATGGTCTCACGAGGACATGTCTGGCATC
GACCCAAAGATCGGTCCCGATCGAGATCTTGGACAACCCTTCAATCTTGGAGCCAGATGTGATGGAGGTTGA
Protein sequenceShow/hide protein sequence
MTLTRSLSRLGSNTQSIPQGKTSIANILSLPTYLALGWTRSRLKKSSTPLVGFSGESVSPEGCIDLPVTIGQDATQVTQMAEFVVIDGRSAYNAIFGRPIIHSFRTVPST
LHQVMKYSTPNGVSTVRGEQKTSRERYASALKGSSVCALEEQTSQDDLPRVSKRQFSPPTEELELVPLLSPEKQISIGTKLGATDREELINFLRSNSNVFSWSHEDMSGI
DPKIGPDRDLGQPFNLGARCDGG