; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g21060 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g21060
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr3:14384600..14386362
RNA-Seq ExpressionMoc03g21060
SyntenyMoc03g21060
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0043167 - ion binding (molecular function)
InterPro domainsIPR003656 - Zinc finger, BED-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033275.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]1.3e-5059.02Show/hide
Query:  KVDTINIDLDLVA--DCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQ
        K  TI++DLD     D  +  K RK   N+K S+VWDHFE+LKGDP +P+AKCKYCG +YAC  KRNGTG++K H+ENCKKY YQKKRD TQ  LAFK +
Subjt:  KVDTINIDLDLVA--DCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQ

Query:  EPAGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQR
        +  G   ++ S+LVC+SF L+  R ALVEM+I+DELPF FVEGKGF++F++K       RFVVPS+ TVARDVLK+Y++EK R
Subjt:  EPAGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQR
KAA0057700.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]2.2e-5058.47Show/hide
Query:  KVDTINIDLDLVA--DCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQ
        K  TI++DLD     D  +  K RK   N+K S+VWDHFE+LKGDP +P+AKCKYCG +YAC  K NGTG++K H+ENCKKY YQKKRD TQ  LAFK +
Subjt:  KVDTINIDLDLVA--DCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQ

Query:  EPAGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQR
        +  G   ++ S+LVC+SF LE  R+ALVEM+I+DELPF FV+GKGF++F++K       RFVVPS+ TVARDVLK+Y++EK R
Subjt:  EPAGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQR
KAA0066711.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]1.3e-5043.26Show/hide
Query:  KVDTINIDLDLVADCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQEP
        K  TI++DLD        L   K ++N+K S+VWDHFE+LKGDP +P+AKCKYCG +YAC  KRNGTG++K H+ENCKKY YQKKRD TQ  LAFK ++ 
Subjt:  KVDTINIDLDLVADCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQEP

Query:  AGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLS-EKQRPEMAKSTIDNVEYVLRHL
         G   ++  +LVC+SF L+   +ALVEM+I+DELPF FV GKGF++F++K       RFVVPS+ TVARDVLK +   E  + +    TI+         
Subjt:  AGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLS-EKQRPEMAKSTIDNVEYVLRHL

Query:  FVRYSVSYSSASGSTSIVAPRTNTTSMNLDTDFDGGYDLGSDFSTKDTTIHNNDSEIDVHLLESLTKNDSNFDILQWWKQNS
                              N     ++       +   D +T  T       EID++LLE+    + +FDILQWWK NS
Subjt:  FVRYSVSYSSASGSTSIVAPRTNTTSMNLDTDFDGGYDLGSDFSTKDTTIHNNDSEIDVHLLESLTKNDSNFDILQWWKQNS
TYK09690.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]1.3e-5059.02Show/hide
Query:  KVDTINIDLDLVA--DCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQ
        K  TI++DLD     D  +  K RK   N+K S+VWDHFE+LKGDP +P+AKCKYCG +YAC  KRNGTG++K H+ENCKKY YQKKRD TQ  LAFK +
Subjt:  KVDTINIDLDLVA--DCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQ

Query:  EPAGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQR
        +  G   ++ S+LVC+SF L+  R ALVEM+I+DELPF FVEGKGF++F++K       RFVVPS+ TVARDVLK+Y++EK R
Subjt:  EPAGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQR
TYK14363.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]1.3e-5059.02Show/hide
Query:  KVDTINIDLDLVA--DCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQ
        K  TI++DLD     D  +  K RK   N+K S+VWDHFE+LKGDP +P+AKCKYCG +YAC  KRNGTG++K H+ENCKKY YQKKRD TQ  LAFK +
Subjt:  KVDTINIDLDLVA--DCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQ

Query:  EPAGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQR
        +  G   ++ S+LVC+SF L+  R ALVEM+I+DELPF FVEGKGF++F++K       RFVVPS+ TVARDVLK+Y++EK R
Subjt:  EPAGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQR
TrEMBL top hitse value%identityAlignment
A0A5A7SVU3 Zinc finger BED domain-containing protein RICESLEEPER 3-like6.2e-5159.02Show/hide
Query:  KVDTINIDLDLVA--DCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQ
        K  TI++DLD     D  +  K RK   N+K S+VWDHFE+LKGDP +P+AKCKYCG +YAC  KRNGTG++K H+ENCKKY YQKKRD TQ  LAFK +
Subjt:  KVDTINIDLDLVA--DCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQ

Query:  EPAGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQR
        +  G   ++ S+LVC+SF L+  R ALVEM+I+DELPF FVEGKGF++F++K       RFVVPS+ TVARDVLK+Y++EK R
Subjt:  EPAGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQR
A0A5A7URG0 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.1e-5058.47Show/hide
Query:  KVDTINIDLDLVA--DCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQ
        K  TI++DLD     D  +  K RK   N+K S+VWDHFE+LKGDP +P+AKCKYCG +YAC  K NGTG++K H+ENCKKY YQKKRD TQ  LAFK +
Subjt:  KVDTINIDLDLVA--DCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQ

Query:  EPAGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQR
        +  G   ++ S+LVC+SF LE  R+ALVEM+I+DELPF FV+GKGF++F++K       RFVVPS+ TVARDVLK+Y++EK R
Subjt:  EPAGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQR
A0A5A7VM38 Zinc finger BED domain-containing protein RICESLEEPER 3-like6.2e-5143.26Show/hide
Query:  KVDTINIDLDLVADCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQEP
        K  TI++DLD        L   K ++N+K S+VWDHFE+LKGDP +P+AKCKYCG +YAC  KRNGTG++K H+ENCKKY YQKKRD TQ  LAFK ++ 
Subjt:  KVDTINIDLDLVADCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQEP

Query:  AGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLS-EKQRPEMAKSTIDNVEYVLRHL
         G   ++  +LVC+SF L+   +ALVEM+I+DELPF FV GKGF++F++K       RFVVPS+ TVARDVLK +   E  + +    TI+         
Subjt:  AGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLS-EKQRPEMAKSTIDNVEYVLRHL

Query:  FVRYSVSYSSASGSTSIVAPRTNTTSMNLDTDFDGGYDLGSDFSTKDTTIHNNDSEIDVHLLESLTKNDSNFDILQWWKQNS
                              N     ++       +   D +T  T       EID++LLE+    + +FDILQWWK NS
Subjt:  FVRYSVSYSSASGSTSIVAPRTNTTSMNLDTDFDGGYDLGSDFSTKDTTIHNNDSEIDVHLLESLTKNDSNFDILQWWKQNS
A0A5D3CEC4 Zinc finger BED domain-containing protein RICESLEEPER 3-like6.2e-5159.02Show/hide
Query:  KVDTINIDLDLVA--DCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQ
        K  TI++DLD     D  +  K RK   N+K S+VWDHFE+LKGDP +P+AKCKYCG +YAC  KRNGTG++K H+ENCKKY YQKKRD TQ  LAFK +
Subjt:  KVDTINIDLDLVA--DCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQ

Query:  EPAGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQR
        +  G   ++ S+LVC+SF L+  R ALVEM+I+DELPF FVEGKGF++F++K       RFVVPS+ TVARDVLK+Y++EK R
Subjt:  EPAGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQR
A0A5D3CR68 Zinc finger BED domain-containing protein RICESLEEPER 3-like6.2e-5159.02Show/hide
Query:  KVDTINIDLDLVA--DCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQ
        K  TI++DLD     D  +  K RK   N+K S+VWDHFE+LKGDP +P+AKCKYCG +YAC  KRNGTG++K H+ENCKKY YQKKRD TQ  LAFK +
Subjt:  KVDTINIDLDLVA--DCSSSLKRRKCKQNIK-SIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQ

Query:  EPAGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQR
        +  G   ++ S+LVC+SF L+  R ALVEM+I+DELPF FVEGKGF++F++K       RFVVPS+ TVARDVLK+Y++EK R
Subjt:  EPAGSVLESDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQR
SwissProt top hitse value%identityAlignment
Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 37.7e-0627.6Show/hide
Query:  SSSLKRRKCKQNIKSIVWDHF--EKLKGDPFNPQAKCKYCGN--MYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQEPAGSVLESDSKLV
        ++S +RRK     KS+VW+HF  E++ G     +A C  C     Y+C  K +GT  LK HI      +  K  D+       K   P  +V  +D +  
Subjt:  SSSLKRRKCKQNIKSIVWDHF--EKLKGDPFNPQAKCKYCGN--MYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQEPAGSVLESDSKLV

Query:  CDSFDLESYRKA---------------LVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQRPEMAKSTI
         +      YR                 L +M+I+ + P   VE +GF  F    IG L+ RF V    T+   V  +Y  E++      ST+
Subjt:  CDSFDLESYRKA---------------LVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQRPEMAKSTI
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTTGGGGAGAAAGTTGATACTATCAACATAGATCTAGATCTAGTGGCCGATTGTTCTTCAAGTCTGAAAAGAAGAAAGTGCAAGCAGAATATCAAAAGTATAGT
GTGGGATCATTTTGAGAAATTGAAAGGTGATCCTTTTAATCCTCAAGCTAAATGCAAATATTGTGGAAATATGTATGCATGTCAACCTAAGCGTAATGGGACGGGATCTT
TAAAATTTCATATAGAAAATTGCAAGAAATACCTTTACCAAAAGAAGAGAGATCTTACCCAAAAAGTATTAGCTTTCAAAAAGCAAGAACCTGCTGGTAGTGTTTTGGAA
TCTGATTCAAAACTTGTTTGTGATTCATTTGATTTGGAGAGTTATAGAAAAGCTTTAGTTGAGATGGTCATTATAGATGAATTGCCTTTTAGTTTTGTCGAGGGTAAGGG
TTTTCGAAGATTTATCAATAAATCAATAGGTTTGCTTGAGCTTAGATTTGTTGTTCCATCTCAAATGACTGTGGCTAGAGATGTTTTGAAGATATATCTTAGTGAGAAAC
AACGACCTGAAATGGCTAAAAGCACGATAGATAATGTGGAGTATGTTTTGAGGCATCTTTTTGTTAGATATAGTGTATCTTATAGTAGTGCAAGTGGTAGTACATCAATT
GTTGCTCCACGTACCAATACTACTAGTATGAACTTGGATACAGATTTTGATGGGGGTTATGATTTGGGTTCTGATTTCTCAACCAAAGATACTACAATTCATAATAACGA
TTCAGAGATCGATGTACACTTGTTAGAATCTCTTACTAAGAATGATAGTAATTTTGACATACTTCAATGGTGGAAGCAGAATAGTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGTTGGGGAGAAAGTTGATACTATCAACATAGATCTAGATCTAGTGGCCGATTGTTCTTCAAGTCTGAAAAGAAGAAAGTGCAAGCAGAATATCAAAAGTATAGT
GTGGGATCATTTTGAGAAATTGAAAGGTGATCCTTTTAATCCTCAAGCTAAATGCAAATATTGTGGAAATATGTATGCATGTCAACCTAAGCGTAATGGGACGGGATCTT
TAAAATTTCATATAGAAAATTGCAAGAAATACCTTTACCAAAAGAAGAGAGATCTTACCCAAAAAGTATTAGCTTTCAAAAAGCAAGAACCTGCTGGTAGTGTTTTGGAA
TCTGATTCAAAACTTGTTTGTGATTCATTTGATTTGGAGAGTTATAGAAAAGCTTTAGTTGAGATGGTCATTATAGATGAATTGCCTTTTAGTTTTGTCGAGGGTAAGGG
TTTTCGAAGATTTATCAATAAATCAATAGGTTTGCTTGAGCTTAGATTTGTTGTTCCATCTCAAATGACTGTGGCTAGAGATGTTTTGAAGATATATCTTAGTGAGAAAC
AACGACCTGAAATGGCTAAAAGCACGATAGATAATGTGGAGTATGTTTTGAGGCATCTTTTTGTTAGATATAGTGTATCTTATAGTAGTGCAAGTGGTAGTACATCAATT
GTTGCTCCACGTACCAATACTACTAGTATGAACTTGGATACAGATTTTGATGGGGGTTATGATTTGGGTTCTGATTTCTCAACCAAAGATACTACAATTCATAATAACGA
TTCAGAGATCGATGTACACTTGTTAGAATCTCTTACTAAGAATGATAGTAATTTTGACATACTTCAATGGTGGAAGCAGAATAGTTGTTGA
Protein sequenceShow/hide protein sequence
MTVGEKVDTINIDLDLVADCSSSLKRRKCKQNIKSIVWDHFEKLKGDPFNPQAKCKYCGNMYACQPKRNGTGSLKFHIENCKKYLYQKKRDLTQKVLAFKKQEPAGSVLE
SDSKLVCDSFDLESYRKALVEMVIIDELPFSFVEGKGFRRFINKSIGLLELRFVVPSQMTVARDVLKIYLSEKQRPEMAKSTIDNVEYVLRHLFVRYSVSYSSASGSTSI
VAPRTNTTSMNLDTDFDGGYDLGSDFSTKDTTIHNNDSEIDVHLLESLTKNDSNFDILQWWKQNSC