| GenBank top hits | e value | %identity | Alignment |
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| GEW78970.1 Gag-Pol polyprotein [Tanacetum cinerariifolium] | 2.1e-59 | 48.88 | Show/hide |
Query: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAEIPDE-KWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKFFPDSYDQIVINLT
MA K+EIEK NG NFSLWK+K+ ILR D CL+ +SER AE+ D+ KW+EM+GNAIANLHLALAD VLSSIEEKK AK+IWDHL + PDSYD +VINLT
Subjt: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAEIPDE-KWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKFFPDSYDQIVINLT
Query: NYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQAEDLSVTRGKTMK---------------------------------------------------
N VL D L F+D+ A+I+E+ENR N+ D+ SS+Q E L VT+G++M+
Subjt: NYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQAEDLSVTRGKTMK---------------------------------------------------
Query: --GDILCCEAATTVEGRKSLADMCYDDYALKIFGI-NIKLKFHDNKVGTIQQVQHVEGLTKNLLSVGE
G+ LCCEA EGRK AD+C +D+ LKI GI ++ +K HD V I+ V+HVEGL KNLLS+G+
Subjt: --GDILCCEAATTVEGRKSLADMCYDDYALKIFGI-NIKLKFHDNKVGTIQQVQHVEGLTKNLLSVGE
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| GEW95159.1 Gag-Pol polyprotein [Tanacetum cinerariifolium] | 2.1e-59 | 48.88 | Show/hide |
Query: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAEIPDE-KWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKFFPDSYDQIVINLT
MA K+EIEK NG NFSLWK+K+ ILR D CL+ +SER AE+ D+ KW+EM+GNAIANLHLALAD VLSSIEEKK AK+IWDHL + PDSYD +VINLT
Subjt: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAEIPDE-KWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKFFPDSYDQIVINLT
Query: NYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQAEDLSVTRGKTMK---------------------------------------------------
N VL D L F+D+ A+I+E+ENR N+ D+ SS+Q E L VT+G++M+
Subjt: NYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQAEDLSVTRGKTMK---------------------------------------------------
Query: --GDILCCEAATTVEGRKSLADMCYDDYALKIFGI-NIKLKFHDNKVGTIQQVQHVEGLTKNLLSVGE
G+ LCCEA EGRK AD+C +D+ LKI GI ++ +K HD V I+ V+HVEGL KNLLS+G+
Subjt: --GDILCCEAATTVEGRKSLADMCYDDYALKIFGI-NIKLKFHDNKVGTIQQVQHVEGLTKNLLSVGE
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| KAA0026163.1 Gag-Pol [Cucumis melo var. makuwa] | 1.4e-55 | 40.05 | Show/hide |
Query: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAEIPDE-KWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKFFP-----------
MAAKFEIEKFNGTNFSLW +K+ V+LR DNCL + + AEI D+ KWNEM+GNA+ N+HLALAD VLSSI+EKKIAKEIWDHL K +
Subjt: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAEIPDE-KWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKFFP-----------
Query: -------------------------------------------------DSYDQIVINLTNYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQAEDL
DSYDQ+VINL N +LIDYL+F+D+ +A++E+ENR KNK DKL + QQAE L
Subjt: -------------------------------------------------DSYDQIVINLTNYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQAEDL
Query: SVTRGKTM---------------------------KGDILCCEAATTVEGRKSLADMCY------------------------------DDYALKIFGI-
+VTRG+ + +G L CEA TT EG+K +AD + +D+ALKI I
Subjt: SVTRGKTM---------------------------KGDILCCEAATTVEGRKSLADMCY------------------------------DDYALKIFGI-
Query: NIKLKFHDNKVGTIQQVQHVEGLTKNLLSV----------------------------------------GETLQEGEASVASRSPSEKLLM
IKLK HDN V TIQQV+HVE L KNLL + GETLQEGEASVAS S E LLM
Subjt: NIKLKFHDNKVGTIQQVQHVEGLTKNLLSV----------------------------------------GETLQEGEASVASRSPSEKLLM
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| KAA0061179.1 Gag-Pol [Cucumis melo var. makuwa] | 3.1e-50 | 42.95 | Show/hide |
Query: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAE-IPDEKWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKFF------------
MA FEIEKFN TNFSLWK+K+ V+LRKDNCL + +R AE I D KWNEM+GNA AN+HLALAD VLSSIEEKK AKEIWDHL K +
Subjt: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAE-IPDEKWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKFF------------
Query: ------------------------------------------------PDSYDQIVINLTNYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQAEDL
PDSYDQ+VINLTN +L DYL+F+D+ +A++E+ENR KNK DKL SSQQAE L
Subjt: ------------------------------------------------PDSYDQIVINLTNYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQAEDL
Query: SVTRGKTM------------------------KGDILCCEAATTVEGRKSLADMCY------------------------------DDYALKIFGI-NIK
VTRG++ +G L CEA TT+EG+K +AD + +D+ALKI GI IK
Subjt: SVTRGKTM------------------------KGDILCCEAATTVEGRKSLADMCY------------------------------DDYALKIFGI-NIK
Query: LKFHDNKVGTIQ
LK HDN V TIQ
Subjt: LKFHDNKVGTIQ
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| KAE8677740.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Hibiscus syriacus] | 7.5e-49 | 51.07 | Show/hide |
Query: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAEIPDE-KWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKF-----------FP
MA KF+IEKFNG NFSLWK+K+ ILRKD L+ +SER + D+ KW EM+ NA+AN HLALAD+VLSSIEEKK AKEIWDHL K P
Subjt: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAEIPDE-KWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKF-----------FP
Query: DSYDQIVINLTNYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQ----AEDLSVTRGKTM----KGDILCCEAATTVEGRKSLADMCYDDYALKIFG
DSYDQ++INLTN + L F+D+ AA++++ENR KNK D+ ++ S +G T+ GD LCCEA+TTVEG + +D+AL+I G
Subjt: DSYDQIVINLTNYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQ----AEDLSVTRGKTM----KGDILCCEAATTVEGRKSLADMCYDDYALKIFG
Query: I-NIKLKFHDNKVGTIQQVQHVEGLTKNLLSVG
I IKLK +D + ++ VQHV+G+ KNLLS G
Subjt: I-NIKLKFHDNKVGTIQQVQHVEGLTKNLLSVG
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7SNG9 Gag-Pol | 6.9e-56 | 40.05 | Show/hide |
Query: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAEIPDE-KWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKFFP-----------
MAAKFEIEKFNGTNFSLW +K+ V+LR DNCL + + AEI D+ KWNEM+GNA+ N+HLALAD VLSSI+EKKIAKEIWDHL K +
Subjt: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAEIPDE-KWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKFFP-----------
Query: -------------------------------------------------DSYDQIVINLTNYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQAEDL
DSYDQ+VINL N +LIDYL+F+D+ +A++E+ENR KNK DKL + QQAE L
Subjt: -------------------------------------------------DSYDQIVINLTNYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQAEDL
Query: SVTRGKTM---------------------------KGDILCCEAATTVEGRKSLADMCY------------------------------DDYALKIFGI-
+VTRG+ + +G L CEA TT EG+K +AD + +D+ALKI I
Subjt: SVTRGKTM---------------------------KGDILCCEAATTVEGRKSLADMCY------------------------------DDYALKIFGI-
Query: NIKLKFHDNKVGTIQQVQHVEGLTKNLLSV----------------------------------------GETLQEGEASVASRSPSEKLLM
IKLK HDN V TIQQV+HVE L KNLL + GETLQEGEASVAS S E LLM
Subjt: NIKLKFHDNKVGTIQQVQHVEGLTKNLLSV----------------------------------------GETLQEGEASVASRSPSEKLLM
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| A0A5A7V644 Gag-Pol | 1.5e-50 | 42.95 | Show/hide |
Query: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAE-IPDEKWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKFF------------
MA FEIEKFN TNFSLWK+K+ V+LRKDNCL + +R AE I D KWNEM+GNA AN+HLALAD VLSSIEEKK AKEIWDHL K +
Subjt: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAE-IPDEKWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKFF------------
Query: ------------------------------------------------PDSYDQIVINLTNYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQAEDL
PDSYDQ+VINLTN +L DYL+F+D+ +A++E+ENR KNK DKL SSQQAE L
Subjt: ------------------------------------------------PDSYDQIVINLTNYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQAEDL
Query: SVTRGKTM------------------------KGDILCCEAATTVEGRKSLADMCY------------------------------DDYALKIFGI-NIK
VTRG++ +G L CEA TT+EG+K +AD + +D+ALKI GI IK
Subjt: SVTRGKTM------------------------KGDILCCEAATTVEGRKSLADMCY------------------------------DDYALKIFGI-NIK
Query: LKFHDNKVGTIQ
LK HDN V TIQ
Subjt: LKFHDNKVGTIQ
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| A0A6A2Y2I6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.6e-49 | 51.07 | Show/hide |
Query: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAEIPDE-KWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKF-----------FP
MA KF+IEKFNG NFSLWK+K+ ILRKD L+ +SER + D+ KW EM+ NA+AN HLALAD+VLSSIEEKK AKEIWDHL K P
Subjt: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAEIPDE-KWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKF-----------FP
Query: DSYDQIVINLTNYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQ----AEDLSVTRGKTM----KGDILCCEAATTVEGRKSLADMCYDDYALKIFG
DSYDQ++INLTN + L F+D+ AA++++ENR KNK D+ ++ S +G T+ GD LCCEA+TTVEG + +D+AL+I G
Subjt: DSYDQIVINLTNYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQ----AEDLSVTRGKTM----KGDILCCEAATTVEGRKSLADMCYDDYALKIFG
Query: I-NIKLKFHDNKVGTIQQVQHVEGLTKNLLSVG
I IKLK +D + ++ VQHV+G+ KNLLS G
Subjt: I-NIKLKFHDNKVGTIQQVQHVEGLTKNLLSVG
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| A0A6A3AGK4 Integrase catalytic domain-containing protein | 9.0e-48 | 41.78 | Show/hide |
Query: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAE-IPDEKWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKFF------------
MA KF+IEKFN NFSLWK+K+ ILRKD CL+ +SER + I D KWNEM+GNA++N HLALAD+VLSSIEEKK AKEIWDHL K +
Subjt: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAE-IPDEKWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKFF------------
Query: ------------------------------------------------PDSYDQIVINLTNYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQAEDL
PDSYDQ++INLTN + + F+D+ AA++++ENR KNK D+ + QQAE L
Subjt: ------------------------------------------------PDSYDQIVINLTNYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQAEDL
Query: SVTRGKTMK------------------GDILCCEAATTVEGRKSLADMCYDDYALKIFGI-NIKLKFHDNKVGTIQQVQHVEGLTKNLLSVG
+ RG++ + GD L CEA+TTVEG + +D+AL+I G+ IKLK +D + ++ V+HV+GL KNLLS G
Subjt: SVTRGKTMK------------------GDILCCEAATTVEGRKSLADMCYDDYALKIFGI-NIKLKFHDNKVGTIQQVQHVEGLTKNLLSVG
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| Q6BCY1 Gag-Pol | 2.2e-46 | 34.46 | Show/hide |
Query: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAEIPDE-KWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKFF------------
MAAKFEIEKFNG NFSLWK+K+ ILRKDNCL+ +SER + D+ KW+EM +A+A+L+L++AD VLSSIEEKK A EIWDHL + +
Subjt: MAAKFEIEKFNGTNFSLWKMKINVILRKDNCLSTMSERSAEIPDE-KWNEMEGNAIANLHLALADKVLSSIEEKKIAKEIWDHLIKFF------------
Query: ------------------------------------------------PDSYDQIVINLTNYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQAEDL
PDSYDQ++INLTN +L DYL F+D+ AA++E+E+R KNK D+ + QQAE L
Subjt: ------------------------------------------------PDSYDQIVINLTNYVLIDYLNFEDIGAAIVEKENRGKNKVDKLASSQQAEDL
Query: SVTRGKTMK---------------------------------------------------GDILCCEAATTVEGRKSLADM-------------------
+V RG++ + G LCCEA+ EGRK AD+
Subjt: SVTRGKTMK---------------------------------------------------GDILCCEAATTVEGRKSLADM-------------------
Query: -----------CYDDYALKIFGI-NIKLKFHDNKVGTIQQVQHVEGLTKNLLSV----------------------------------------GETLQE
DD+AL+I GI IKLK +D V T+Q V+HV+GL KNLLS GETLQE
Subjt: -----------CYDDYALKIFGI-NIKLKFHDNKVGTIQQVQHVEGLTKNLLSV----------------------------------------GETLQE
Query: GEASVASRSPSEKLL
EASVA+ SP LL
Subjt: GEASVASRSPSEKLL
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