; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g21970 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g21970
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr3:15333724..15334462
RNA-Seq ExpressionMoc03g21970
SyntenyMoc03g21970
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON77750.1 hypothetical protein PanWU01x14_025060 [Parasponia andersonii]2.6e-0861.7Show/hide
Query:  GGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWN
        GGL IG +  +NN+LL+KWLWRF +ERNALW KVI S YG +P+ W+
Subjt:  GGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWN

RVX09326.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]2.6e-0856Show/hide
Query:  QYGGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWNS
        + GGL  G    +NN+LL KWLWRF +ER+ LW KVI SIYG  P+GW++
Subjt:  QYGGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWNS

TYK28534.1 hypothetical protein E5676_scaffold629G001780 [Cucumis melo var. makuwa]9.0e-0955.77Show/hide
Query:  YGGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWNSLPL
        YGGL IG+  +KNN+LL KWLWRF +E NA WR +I +IYG + +GW++  L
Subjt:  YGGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWNSLPL

XP_022032394.1 uncharacterized protein LOC110933482 [Helianthus annuus]2.0e-0853.57Show/hide
Query:  MQYGGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWNSLPLKV
        ++YGG+ +GAL   N SLL KW WRF   +NALWRKV+ SI+G    GWN +P+K+
Subjt:  MQYGGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWNSLPLKV

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]8.7e-1250Show/hide
Query:  MQYGGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWNSL----PLKVVPKEDLAHRSSVFEAQ---GAPQGDK
        M+ GGL IGA   KNN+LL+KWLW FT+E NALWR+VI SIYG D +GW +       K  P  D+A   S F+      A QGD+
Subjt:  MQYGGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWNSL----PLKVVPKEDLAHRSSVFEAQ---GAPQGDK

TrEMBL top hitse value%identityAlignment
A0A2P5DWU0 Uncharacterized protein1.3e-0861.7Show/hide
Query:  GGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWN
        GGL IG +  +NN+LL+KWLWRF +ERNALW KVI S YG +P+ W+
Subjt:  GGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWN

A0A438BZ68 Putative ribonuclease H protein2.2e-0854Show/hide
Query:  QYGGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWNS
        + GGL  G   ++N++LL KWLWRF +ER+ LW KVI SIYG  P+GW++
Subjt:  QYGGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWNS

A0A438JK40 LINE-1 retrotransposable element ORF2 protein1.3e-0856Show/hide
Query:  QYGGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWNS
        + GGL  G    +NN+LL KWLWRF +ER+ LW KVI SIYG  P+GW++
Subjt:  QYGGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWNS

A0A5D3DYG7 Uncharacterized protein4.4e-0955.77Show/hide
Query:  YGGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWNSLPL
        YGGL IG+  +KNN+LL KWLWRF +E NA WR +I +IYG + +GW++  L
Subjt:  YGGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWNSLPL

A0A6J1E196 uncharacterized protein LOC1110250194.2e-1250Show/hide
Query:  MQYGGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWNSL----PLKVVPKEDLAHRSSVFEAQ---GAPQGDK
        M+ GGL IGA   KNN+LL+KWLW FT+E NALWR+VI SIYG D +GW +       K  P  D+A   S F+      A QGD+
Subjt:  MQYGGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWNSL----PLKVVPKEDLAHRSSVFEAQ---GAPQGDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATACGGAGGTCTCCATATAGGGGCCTTACACCAGAAGAACAACAGTTTACTCCTCAAATGGCTTTGGAGATTCACCCAAGAAAGGAATGCGCTGTGGAGAAAGGT
CATTGGTAGTATCTATGGTGAAGATCCTCATGGGTGGAATTCTCTTCCCCTAAAGGTTGTGCCAAAGGAAGACCTTGCTCATAGAAGCAGTGTTTTCGAGGCGCAAGGCG
CACCTCAAGGCGACAAGCCCTTAGATCGCCTTAAGGCGAGAGGCGATAAAAAGGCGACGCCTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAATACGGAGGTCTCCATATAGGGGCCTTACACCAGAAGAACAACAGTTTACTCCTCAAATGGCTTTGGAGATTCACCCAAGAAAGGAATGCGCTGTGGAGAAAGGT
CATTGGTAGTATCTATGGTGAAGATCCTCATGGGTGGAATTCTCTTCCCCTAAAGGTTGTGCCAAAGGAAGACCTTGCTCATAGAAGCAGTGTTTTCGAGGCGCAAGGCG
CACCTCAAGGCGACAAGCCCTTAGATCGCCTTAAGGCGAGAGGCGATAAAAAGGCGACGCCTGAGTGA
Protein sequenceShow/hide protein sequence
MQYGGLHIGALHQKNNSLLLKWLWRFTQERNALWRKVIGSIYGEDPHGWNSLPLKVVPKEDLAHRSSVFEAQGAPQGDKPLDRLKARGDKKATPE