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Moc03g22100 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g22100
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCyclin-dependent kinases regulatory subunit
Genome locationchr3:15451503..15456946
RNA-Seq ExpressionMoc03g22100
SyntenyMoc03g22100
Gene Ontology termsGO:0007346 - regulation of mitotic cell cycle (biological process)
GO:0045737 - positive regulation of cyclin-dependent protein serine/threonine kinase activity (biological process)
GO:0051301 - cell division (biological process)
GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0019901 - protein kinase binding (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0043130 - ubiquitin binding (molecular function)
GO:0061575 - cyclin-dependent protein serine/threonine kinase activator activity (molecular function)
InterPro domainsIPR000789 - Cyclin-dependent kinase, regulatory subunit
IPR036858 - Cyclin-dependent kinase, regulatory subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER48823.1 cyclin-dependent kinases regulatory subunit [Striga asiatica]3.4e-1758.16Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSEV---------------KRMAGDRGSAEPGMGPLRNPSPRAAHYAVQEATQLSAAAGESSA
        MGQIQYSEKYFDD YEYRHVVLP EVAKLLPKNRLLSEV               +RMA + G  +P +G L +    A H+A+QEA QL  AAG+SS+
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSEV---------------KRMAGDRGSAEPGMGPLRNPSPRAAHYAVQEATQLSAAAGESSA

MCI42386.1 cyclin-dependent kinases regulatory subunit 1-like [Trifolium medium]2.6e-12100Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSEV
        MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSEV
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSEV

OEL33471.1 Cyclin-dependent kinases regulatory subunit 2 [Dichanthelium oligosanthes]2.3e-1368.66Show/hide
Query:  PWPP-PDSVIHGGGEARANPSDFSHIFSAMGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE
        P+PP   S +H     RA P     +   MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE
Subjt:  PWPP-PDSVIHGGGEARANPSDFSHIFSAMGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE

RRT68457.1 hypothetical protein B296_00021906 [Ensete ventricosum]5.5e-1541.03Show/hide
Query:  MGQIQYSEKYFDDTYEY--------------------------------------RHVVLPPEVAKLLPKNRLLSEV-----------------------
        MGQIQYSEKYFDDTYEY                                      RHVVLPPEVAKLLPKNRLLSEV                       
Subjt:  MGQIQYSEKYFDDTYEY--------------------------------------RHVVLPPEVAKLLPKNRLLSEV-----------------------

Query:  ---------------KRMAGDRGSAEPGMGPLRNPSPRAAHYAVQEATQLSAAAGE
                       +R+AGDRG+AE GMG LR+P P  AH+A+  A QL  AAGE
Subjt:  ---------------KRMAGDRGSAEPGMGPLRNPSPRAAHYAVQEATQLSAAAGE

RWW16293.1 hypothetical protein GW17_00019835, partial [Ensete ventricosum]1.9e-1541.67Show/hide
Query:  MGQIQYSEKYFDDTYEY--------------------------------------RHVVLPPEVAKLLPKNRLLSEV-----------------------
        MGQIQYSEKYFDDTYEY                                      RHVVLPPEVAKLLPKNRLLSEV                       
Subjt:  MGQIQYSEKYFDDTYEY--------------------------------------RHVVLPPEVAKLLPKNRLLSEV-----------------------

Query:  ---------------KRMAGDRGSAEPGMGPLRNPSPRAAHYAVQEATQLSAAAGE
                       +R+AGDRG+AE GMG LR+P P AAH+A+  A QL  AAGE
Subjt:  ---------------KRMAGDRGSAEPGMGPLRNPSPRAAHYAVQEATQLSAAAGE

TrEMBL top hitse value%identityAlignment
A0A1E5W7T7 Cyclin-dependent kinases regulatory subunit1.1e-1368.66Show/hide
Query:  PWPP-PDSVIHGGGEARANPSDFSHIFSAMGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE
        P+PP   S +H     RA P     +   MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE
Subjt:  PWPP-PDSVIHGGGEARANPSDFSHIFSAMGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE

A0A392S3D5 Cyclin-dependent kinases regulatory subunit (Fragment)1.2e-12100Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSEV
        MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSEV
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSEV

A0A426ZWX4 Uncharacterized protein2.7e-1541.03Show/hide
Query:  MGQIQYSEKYFDDTYEY--------------------------------------RHVVLPPEVAKLLPKNRLLSEV-----------------------
        MGQIQYSEKYFDDTYEY                                      RHVVLPPEVAKLLPKNRLLSEV                       
Subjt:  MGQIQYSEKYFDDTYEY--------------------------------------RHVVLPPEVAKLLPKNRLLSEV-----------------------

Query:  ---------------KRMAGDRGSAEPGMGPLRNPSPRAAHYAVQEATQLSAAAGE
                       +R+AGDRG+AE GMG LR+P P  AH+A+  A QL  AAGE
Subjt:  ---------------KRMAGDRGSAEPGMGPLRNPSPRAAHYAVQEATQLSAAAGE

A0A444F102 Uncharacterized protein (Fragment)9.1e-1641.67Show/hide
Query:  MGQIQYSEKYFDDTYEY--------------------------------------RHVVLPPEVAKLLPKNRLLSEV-----------------------
        MGQIQYSEKYFDDTYEY                                      RHVVLPPEVAKLLPKNRLLSEV                       
Subjt:  MGQIQYSEKYFDDTYEY--------------------------------------RHVVLPPEVAKLLPKNRLLSEV-----------------------

Query:  ---------------KRMAGDRGSAEPGMGPLRNPSPRAAHYAVQEATQLSAAAGE
                       +R+AGDRG+AE GMG LR+P P AAH+A+  A QL  AAGE
Subjt:  ---------------KRMAGDRGSAEPGMGPLRNPSPRAAHYAVQEATQLSAAAGE

A0A5A7QU21 Cyclin-dependent kinases regulatory subunit1.7e-1758.16Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSEV---------------KRMAGDRGSAEPGMGPLRNPSPRAAHYAVQEATQLSAAAGESSA
        MGQIQYSEKYFDD YEYRHVVLP EVAKLLPKNRLLSEV               +RMA + G  +P +G L +    A H+A+QEA QL  AAG+SS+
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSEV---------------KRMAGDRGSAEPGMGPLRNPSPRAAHYAVQEATQLSAAAGESSA

SwissProt top hitse value%identityAlignment
A2XCH8 Cyclin-dependent kinases regulatory subunit 19.7e-15100Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE
        MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE

O23249 Cyclin-dependent kinases regulatory subunit 12.8e-1497.37Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE
        MGQIQYSEKYFDDT+EYRHVVLPPEVAKLLPKNRLLSE
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE

P55933 Probable cyclin-dependent kinases regulatory subunit7.2e-1080Show/hide
Query:  IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE
        IQYSEKY+DD +EYRHV+LPP+VAK +PKNRLLSE
Subjt:  IQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE

Q6PS57 Cyclin-dependent kinases regulatory subunit 19.7e-15100Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE
        MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE

Q9SJJ5 Cyclin-dependent kinases regulatory subunit 21.1e-1392.11Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE
        MGQIQYS+KYFDDT+EYRHVVLPPEVAKLLPKNR+LSE
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE

Arabidopsis top hitse value%identityAlignment
AT2G27960.1 cyclin-dependent kinase-subunit 12.0e-1597.37Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE
        MGQIQYSEKYFDDT+EYRHVVLPPEVAKLLPKNRLLSE
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE

AT2G27970.1 CDK-subunit 27.6e-1592.11Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE
        MGQIQYS+KYFDDT+EYRHVVLPPEVAKLLPKNR+LSE
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTGGTCGCCGCATATCCCTTGGAAGATGCTGTTACCGACAACCGGCTGGACCGCTCCGGCGAGGCTCCACCGCCGTGGCCGCCTCCCGATAGCGTGATCCACGG
CGGTGGGGAGGCGCGAGCGAACCCTAGCGATTTCAGTCACATATTCAGTGCGATGGGCCAGATCCAGTACTCCGAAAAGTATTTCGACGATACCTATGAATACAGGCATG
TGGTGCTTCCCCCGGAAGTCGCTAAACTTCTCCCCAAGAATCGCCTTCTTTCCGAAGTAAAACGAATGGCGGGCGATCGGGGTTCAGCAGAGCCGGGGATGGGTCCACTA
CGCAATCCATCGCCCAGAGCCGCACATTATGCTGTTCAGGAGGCCACTCAACTATCAGCAGCAGCAGGAGAATCAAGCGCAGCAGATTATGGCCAAGTGATGGATTTCGT
TATCTTCTCTAGTGTAGTTGTTCTTTCTTCTTCTCCAATTTGGAGAAGCTGTGGCTCTCAGTATTCTGTCATAGTCATAAGCCAGAATTTCCCCCTTCCCTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTGGTCGCCGCATATCCCTTGGAAGATGCTGTTACCGACAACCGGCTGGACCGCTCCGGCGAGGCTCCACCGCCGTGGCCGCCTCCCGATAGCGTGATCCACGG
CGGTGGGGAGGCGCGAGCGAACCCTAGCGATTTCAGTCACATATTCAGTGCGATGGGCCAGATCCAGTACTCCGAAAAGTATTTCGACGATACCTATGAATACAGGCATG
TGGTGCTTCCCCCGGAAGTCGCTAAACTTCTCCCCAAGAATCGCCTTCTTTCCGAAGTAAAACGAATGGCGGGCGATCGGGGTTCAGCAGAGCCGGGGATGGGTCCACTA
CGCAATCCATCGCCCAGAGCCGCACATTATGCTGTTCAGGAGGCCACTCAACTATCAGCAGCAGCAGGAGAATCAAGCGCAGCAGATTATGGCCAAGTGATGGATTTCGT
TATCTTCTCTAGTGTAGTTGTTCTTTCTTCTTCTCCAATTTGGAGAAGCTGTGGCTCTCAGTATTCTGTCATAGTCATAAGCCAGAATTTCCCCCTTCCCTGTTGA
Protein sequenceShow/hide protein sequence
MKVVAAYPLEDAVTDNRLDRSGEAPPPWPPPDSVIHGGGEARANPSDFSHIFSAMGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSEVKRMAGDRGSAEPGMGPL
RNPSPRAAHYAVQEATQLSAAAGESSAADYGQVMDFVIFSSVVVLSSSPIWRSCGSQYSVIVISQNFPLPC