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Moc03g22470 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g22470
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRAB6-interacting golgin
Genome locationchr3:15849705..15852036
RNA-Seq ExpressionMoc03g22470
SyntenyMoc03g22470
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139478.1 uncharacterized protein LOC101203874 [Cucumis sativus]3.4e-7089.39Show/hide
Query:  MTTQKQSWEAQAQQSQMQRVRNSGMI-SHVN--AIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADP
        MTTQKQSWEAQ    QMQRV+NSGMI S+VN   IGSPLKEDQ+EE+SRSA ALFRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DP
Subjt:  MTTQKQSWEAQAQQSQMQRVRNSGMI-SHVN--AIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADP

Query:  MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDIL
        MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKN+EKSQLV+KLMELVNESEKLRMKKLEELSKNIDIL
Subjt:  MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDIL

XP_008461743.1 PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo]1.4e-7189.39Show/hide
Query:  MTTQKQSWEAQAQQSQMQRVRNSGMISH--VNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPM
        MTTQKQSWEAQ    QMQRV+NSGMIS    N IGSPLKEDQ+EE+SRSA ALFRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPM
Subjt:  MTTQKQSWEAQAQQSQMQRVRNSGMISH--VNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKNREKSQLV+KLMELVNESEKLRM+KLEELSKNIDILH
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

XP_022142637.1 uncharacterized protein LOC111012700 [Momordica charantia]4.6e-83100Show/hide
Query:  MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRK
        MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRK
Subjt:  MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRK

Query:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
Subjt:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

XP_022970344.1 uncharacterized protein LOC111469338 [Cucurbita maxima]9.7e-6584.75Show/hide
Query:  MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRK
        MTTQKQSWEAQ  Q Q QRV+         AIGSP +EDQ+EELSRSA ALFRAKEEEIERKKMEMR+KVE RLGRAEEATKRLAEIREELE M DPMRK
Subjt:  MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRK

Query:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        EVS IRKKIDLVNKELKPLG+TCQKKEREYKEVLEL NEKN+EKSQLVAKLMELVNESEKLRMKKLEELS NIDILH
Subjt:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

XP_038893849.1 uncharacterized protein LOC120082661 [Benincasa hispida]8.2e-7288.83Show/hide
Query:  MTTQKQSWEAQAQQSQMQRVRNSGMI--SHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPM
        MTT KQSWEAQ Q  QMQRV+NSG++  S+VNAIGSP+KEDQ+EE+SRSA A+FRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPM
Subjt:  MTTQKQSWEAQAQQSQMQRVRNSGMI--SHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKN+EKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

TrEMBL top hitse value%identityAlignment
A0A0A0LY59 RAB6-interacting golgin1.7e-7089.39Show/hide
Query:  MTTQKQSWEAQAQQSQMQRVRNSGMI-SHVN--AIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADP
        MTTQKQSWEAQ    QMQRV+NSGMI S+VN   IGSPLKEDQ+EE+SRSA ALFRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DP
Subjt:  MTTQKQSWEAQAQQSQMQRVRNSGMI-SHVN--AIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADP

Query:  MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDIL
        MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKN+EKSQLV+KLMELVNESEKLRMKKLEELSKNIDIL
Subjt:  MRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDIL

A0A1S3CFV6 RAB6-interacting golgin6.7e-7289.39Show/hide
Query:  MTTQKQSWEAQAQQSQMQRVRNSGMISH--VNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPM
        MTTQKQSWEAQ    QMQRV+NSGMIS    N IGSPLKEDQ+EE+SRSA ALFRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPM
Subjt:  MTTQKQSWEAQAQQSQMQRVRNSGMISH--VNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKNREKSQLV+KLMELVNESEKLRM+KLEELSKNIDILH
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

A0A5D3CH78 RAB6-interacting golgin6.7e-7289.39Show/hide
Query:  MTTQKQSWEAQAQQSQMQRVRNSGMISH--VNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPM
        MTTQKQSWEAQ    QMQRV+NSGMIS    N IGSPLKEDQ+EE+SRSA ALFRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPM
Subjt:  MTTQKQSWEAQAQQSQMQRVRNSGMISH--VNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPM

Query:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKNREKSQLV+KLMELVNESEKLRM+KLEELSKNIDILH
Subjt:  RKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

A0A6J1CNF1 RAB6-interacting golgin2.2e-83100Show/hide
Query:  MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRK
        MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRK
Subjt:  MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRK

Query:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
Subjt:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

A0A6J1I589 RAB6-interacting golgin4.7e-6584.75Show/hide
Query:  MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRK
        MTTQKQSWEAQ  Q Q QRV+         AIGSP +EDQ+EELSRSA ALFRAKEEEIERKKMEMR+KVE RLGRAEEATKRLAEIREELE M DPMRK
Subjt:  MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRK

Query:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        EVS IRKKIDLVNKELKPLG+TCQKKEREYKEVLEL NEKN+EKSQLVAKLMELVNESEKLRMKKLEELS NIDILH
Subjt:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27740.1 Family of unknown function (DUF662)7.2e-5063.43Show/hide
Query:  MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRK
        M T +Q  E Q Q   +QR+++SG IS     GSP+ ++++EELS+SAFALF+AKE+EIER+KME++D+V+ +LG AEEAT+RLAEIREELEA+ DPMRK
Subjt:  MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRK

Query:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDI
        E+S IRK++D +N+ELKPLG +CQ+KERE+KE LE +NEKN+EK+  V+KL+ELV ESEKLRM KLEELSK+I+I
Subjt:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDI

AT2G36410.2 Family of unknown function (DUF662)2.2e-4661.68Show/hide
Query:  EAQAQQSQMQRVRNSGMISHVNAIG-SPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRK
        + Q+Q     + +++ M+ H  ++  S     +DEE++RSA + FRAKE+EIE+++ME+R++++A+LGR E+ TKRL+ IREELE+MADPMRKEVS +RK
Subjt:  EAQAQQSQMQRVRNSGMISHVNAIG-SPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRK

Query:  KIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNID
        KID VNKELKPLG T QKKEREYKE L+ FNEKNREK QL+ KLMELV ESEKLRM KLEELSK+I+
Subjt:  KIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNID

AT3G09980.1 Family of unknown function (DUF662)3.0e-4864.57Show/hide
Query:  TQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEV
        T + +  A A  S+    + SG +S      S     +DEE+SR+A + FRAKEEEIE+KKME+R++V+A+LGR EE TKRLA IREELE +ADPMRKEV
Subjt:  TQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEV

Query:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH
        + +RKKID VNKELKPLG T QKKEREYKE LE FNEKNREK QL+ +LMELV ESEK+RMKKLEELSKNID +H
Subjt:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH

AT3G52920.1 Family of unknown function (DUF662)3.1e-4571.74Show/hide
Query:  QDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNE
        +DEE++RSA + FRAKE+EIE++KME+R++V+A+LGR EE T+RLA IREELE MADPMRKEV+++RKKID VNKELKPLG T QKKEREYKE L+ FNE
Subjt:  QDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNE

Query:  KNREKSQLVAKLME---LVNESEKLRMKKLEELSKNID
        KNREK QL+ KLME   LV ESEKLR+KKL+ELS++ID
Subjt:  KNREKSQLVAKLME---LVNESEKLRMKKLEELSKNID

AT3G52920.2 Family of unknown function (DUF662)7.4e-4773.33Show/hide
Query:  QDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNE
        +DEE++RSA + FRAKE+EIE++KME+R++V+A+LGR EE T+RLA IREELE MADPMRKEV+++RKKID VNKELKPLG T QKKEREYKE L+ FNE
Subjt:  QDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNE

Query:  KNREKSQLVAKLMELVNESEKLRMKKLEELSKNID
        KNREK QL+ KLMELV ESEKLR+KKL+ELS++ID
Subjt:  KNREKSQLVAKLMELVNESEKLRMKKLEELSKNID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACGCAGAAACAGAGCTGGGAGGCGCAGGCGCAACAATCGCAGATGCAGCGAGTGAGGAACTCGGGCATGATAAGCCATGTGAATGCGATTGGGAGTCCG
TTGAAGGAGGATCAAGACGAGGAGCTTTCGCGATCGGCGTTCGCTCTGTTCCGCGCCAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGACAAGGTG
GAGGCACGCCTTGGAAGAGCCGAGGAAGCCACCAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGCTATGGCGGATCCAATGAGGAAGGAAGTATCGTTCATC
CGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACCTGCCAAAAGAAGGAGAGGGAATACAAAGAAGTGCTAGAGTTATTCAATGAGAAG
AACAGAGAGAAATCTCAATTGGTAGCCAAACTTATGGAGTTGGTGAATGAGAGTGAGAAACTAAGGATGAAGAAGTTGGAAGAGCTGAGCAAGAACATTGACATC
CTTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGACGCAGAAACAGAGCTGGGAGGCGCAGGCGCAACAATCGCAGATGCAGCGAGTGAGGAACTCGGGCATGATAAGCCATGTGAATGCGATTGGGAGTCCG
TTGAAGGAGGATCAAGACGAGGAGCTTTCGCGATCGGCGTTCGCTCTGTTCCGCGCCAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGACAAGGTG
GAGGCACGCCTTGGAAGAGCCGAGGAAGCCACCAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGCTATGGCGGATCCAATGAGGAAGGAAGTATCGTTCATC
CGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACCTGCCAAAAGAAGGAGAGGGAATACAAAGAAGTGCTAGAGTTATTCAATGAGAAG
AACAGAGAGAAATCTCAATTGGTAGCCAAACTTATGGAGTTGGTGAATGAGAGTGAGAAACTAAGGATGAAGAAGTTGGAAGAGCTGAGCAAGAACATTGACATC
CTTCATTAA
Protein sequenceShow/hide protein sequence
MTTQKQSWEAQAQQSQMQRVRNSGMISHVNAIGSPLKEDQDEELSRSAFALFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFI
RKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH