; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g23110 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g23110
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr3:16347732..16348658
RNA-Seq ExpressionMoc03g23110
SyntenyMoc03g23110
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583697.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]5.3e-15187.58Show/hide
Query:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM
        MP  Q  +PFYAALL+ACSSTKN  +L+QIHALTIRL ISHHDFIRTKL S+YAAC  L QAT IFSFATRRPTFLFN LIRAHSSLRLF QSLSIFR M
Subjt:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM

Query:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER
        LLSGKPIDRHTLP V+KSCTGLSSLRLGRQVHG VVINGFS DLPN NALITMYGKCGDLGVARKVFD MPERNEVSWSALMAGYGVHG F EVFGLFER
Subjt:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER

Query:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL
        MVE+GQKPD LTFTALLTACSHGGL+ERGKEYFGMM MGFDLRPGLEHYTCMVD+LGR GQVEEAEKLIMEME+EPDEALWGALLSACRIHGKAEVADR+
Subjt:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL

Query:  QKRFIE
        Q RFI+
Subjt:  QKRFIE

KAG7019344.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-15087.25Show/hide
Query:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM
        MP  Q  +PFYAALL+ACSSTKN  +L+QIHALTIRL ISHHDFIRTKL S+YAAC  L QAT IFSFATRRPTFLFN LIRAHSSLRLF QSLSIFR M
Subjt:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM

Query:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER
        LLSGKPIDRHTLP V+KSCTGLSSLRLGRQVHG VVINGFS DLPN NALITMYGKCGDLGVARKVFD MPERNEVSWSALMAGYGVHG F EVFGLFER
Subjt:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER

Query:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL
        MVE+GQKPD LTFTALLTACSHGGL+ERGKEYFGMM MGFDLRPGLEHYTCMVD+LGR GQVEEAEKLIMEME+EPDEALWGALLSACRIHGKAEVADR+
Subjt:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL

Query:  QKRFIE
        Q RF++
Subjt:  QKRFIE

XP_022142717.1 pentatricopeptide repeat-containing protein At1g06140, mitochondrial-like [Momordica charantia]4.9e-173100Show/hide
Query:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM
        MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM
Subjt:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM

Query:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER
        LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER
Subjt:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER

Query:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL
        MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL
Subjt:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL

Query:  QKRFIEDS
        QKRFIEDS
Subjt:  QKRFIEDS

XP_022927399.1 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita moschata]9.0e-15187.25Show/hide
Query:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM
        MP  Q  +PFYAALL+ACSSTKN  +L+QIHALTIRL ISHHDFIRTKL S+YAAC  L QAT IFSFATRRPTFLFN LIRAHSSLRLF QSLSIFRRM
Subjt:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM

Query:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER
        LLSGKPIDRHTLP V+KSCTGLSSLRLGRQVHG VVINGFS DLPN NALITMYGKCGDLGVARKVFD MPERNEVSWSALMAGYGVHG F EVFGLFER
Subjt:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER

Query:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL
        MVE+GQKPD LTFTALLTACSHGGL+ERGKEYFGMM+MGFDLRPGLEHYTCMVD+LGR GQVEEAEKLIMEME+EPDEALWGALLSACRIHGK EVADR+
Subjt:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL

Query:  QKRFIE
        Q RF++
Subjt:  QKRFIE

XP_023520705.1 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita pepo subsp. pepo]5.3e-15187.25Show/hide
Query:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM
        MP  Q  +PFYAALL+ACSSTKN  +L+QIHALTIRL ISHHDFIRTKL S+YAAC  L QAT IFSFATRRPTFLFN LIRAHSSLRLF QSLSIFR M
Subjt:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM

Query:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER
        L+SGKPIDRHTLP VLKSCTGLSSLRLGRQVHG VVINGFS DLPN NALITMYGKCGDLGVARKVFD MPERNEVSWSALMAGYGVHG FGEVFGLFER
Subjt:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER

Query:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL
        MVE+GQKPD LTFTALLTACSHGGL+ERGKEYFGMM+MGFDLRPGLEHYTCMVD+LGR GQVEEAEKLIMEME+EPDEALWGALL ACRIHGKAEVADR+
Subjt:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL

Query:  QKRFIE
        Q RF++
Subjt:  QKRFIE

TrEMBL top hitse value%identityAlignment
A0A0A0K1F7 Uncharacterized protein6.5e-14784.64Show/hide
Query:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM
        MP     +PFYAALL+ACSST NLH+L+QIHALTI L ISHH FIRTKL S+YAACAQL QAT IFSFATRRPT+LFNTLIRAHSSLRLF QSLSIFR M
Subjt:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM

Query:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER
        LLSGK IDRHTLP VLKSCTGLSSLRLGRQVHG ++INGFS DLP+ NALITMYGKCGDLGVARKVFD MPERNEVSWSALMAGYGVHG FGEVF LFER
Subjt:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER

Query:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL
        MVE+GQKPD LTFT+LLTACSHGGL+E+GKEYFGMMRM F LRPGL+HYTCMVD+LGR+GQVEEAEKLIMEME+EPDEALWGA+LSACRIHGK +VADR+
Subjt:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL

Query:  QKRFIE
        QKRFI+
Subjt:  QKRFIE

A0A5A7UT42 Pentatricopeptide repeat-containing protein1.7e-14282.35Show/hide
Query:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM
        MP     +PFYAALLEACSSTKNLH+L+QIHALTI L ISHH FIRTKL S+YAACAQL QA  IFSFATRRPT+LFN LIRAHSSLRLF QSLSIFR M
Subjt:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM

Query:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER
        LLSGK  DRHT PLVLKSCTGLSSLRLGRQVHG ++INGFS DLP+ NALITMY KCGDLGVARKVFD MPERNEVSWSALMAGYGVHG FGEVF LFER
Subjt:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER

Query:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL
        MV++GQ+PD LTFT+LLTACSHGGL+E+GKEYF  MRM F LRPGL+HYTCMVD+LGR GQVEEAEKLIMEME+EPDEALWGA+LSACRIHG+ +VADR+
Subjt:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL

Query:  QKRFIE
        QKRFI+
Subjt:  QKRFIE

A0A6J1CNN2 pentatricopeptide repeat-containing protein At1g06140, mitochondrial-like2.4e-173100Show/hide
Query:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM
        MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM
Subjt:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM

Query:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER
        LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER
Subjt:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER

Query:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL
        MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL
Subjt:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL

Query:  QKRFIEDS
        QKRFIEDS
Subjt:  QKRFIEDS

A0A6J1EHW3 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like4.4e-15187.25Show/hide
Query:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM
        MP  Q  +PFYAALL+ACSSTKN  +L+QIHALTIRL ISHHDFIRTKL S+YAAC  L QAT IFSFATRRPTFLFN LIRAHSSLRLF QSLSIFRRM
Subjt:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM

Query:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER
        LLSGKPIDRHTLP V+KSCTGLSSLRLGRQVHG VVINGFS DLPN NALITMYGKCGDLGVARKVFD MPERNEVSWSALMAGYGVHG F EVFGLFER
Subjt:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER

Query:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL
        MVE+GQKPD LTFTALLTACSHGGL+ERGKEYFGMM+MGFDLRPGLEHYTCMVD+LGR GQVEEAEKLIMEME+EPDEALWGALLSACRIHGK EVADR+
Subjt:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRL

Query:  QKRFIE
        Q RF++
Subjt:  QKRFIE

A0A6J1I7X0 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like2.2e-15086.69Show/hide
Query:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM
        MP  Q  +PFYAALL+ACSSTKN H+L+QIHALTIRL ISHHDFIRTKL S+YAAC  L QAT IFSFATRRPTFLFN LIRAHSSLRLF QSLSIFR M
Subjt:  MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRM

Query:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER
        LLSGKPIDRHTLP VLKSCTGLSSLRLGRQVHG VVINGFS DLPN NALITMYGKCGDLG+ARKVFD MPERNEVSWSALMAGYGVHG FGEVFGLFER
Subjt:  LLSGKPIDRHTLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFER

Query:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLI--MEMEVEPDEALWGALLSACRIHGKAEVAD
        MVE+GQKPD LTFTALLTACSHGGL+ERGKEYFGMM+MGF+L+PGLEHYTCMVD+LGR GQVEEAEKLI  MEME+EPDEALWGALLSACRIHGKAEVAD
Subjt:  MVEDGQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLI--MEMEVEPDEALWGALLSACRIHGKAEVAD

Query:  RLQKRFIE
        R+Q RF++
Subjt:  RLQKRFIE

SwissProt top hitse value%identityAlignment
P93005 Pentatricopeptide repeat-containing protein At2g336806.2e-5439.22Show/hide
Query:  LLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRHTLP
        +L ACS    L   +Q+H+  ++L    H F  T LV  YA    L  A   F     R   L+ +LI  +       ++L ++RRM  +G   +  T+ 
Subjt:  LLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRHTLP

Query:  LVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVEDGQKPDGLTF
         VLK+C+ L++L LG+QVHG  + +GF +++P  +AL TMY KCG L     VF   P ++ VSW+A+++G   +G+  E   LFE M+ +G +PD +TF
Subjt:  LVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVEDGQKPDGLTF

Query:  TALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEV
          +++ACSH G VERG  YF MM     L P ++HY CMVD+L RAGQ++EA++ I    ++    LW  LLSAC+ HGK E+
Subjt:  TALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEV

Q9CAA8 Putative pentatricopeptide repeat-containing protein At1g689302.6e-5234.46Show/hide
Query:  YAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRH
        + ++L AC     ++  +QIHA  IR     H ++ + L+  Y  C  L  A  +F    ++    +  ++  +       +++ IF  M  SG   D +
Subjt:  YAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRH

Query:  TLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVEDGQKPDG
        TL   + +C  +SSL  G Q HG  + +G    +  SN+L+T+YGKCGD+  + ++F+EM  R+ VSW+A+++ Y   G+  E   LF++MV+ G KPDG
Subjt:  TLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVEDGQKPDG

Query:  LTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRLQKRFIE
        +T T +++ACS  GLVE+G+ YF +M   + + P + HY+CM+D+  R+G++EEA + I  M   PD   W  LLSACR  G  E+     +  IE
Subjt:  LTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRLQKRFIE

Q9LND4 Pentatricopeptide repeat-containing protein At1g06140, mitochondrial1.3e-5436.52Show/hide
Query:  LLEACSSTKNLHSLEQIHALTIRLA-ISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRHTL
        L++AC +       + +H ++IR + I   D+++  ++  Y  C  L  A  +F  +  R   ++ TLI   +      ++  +FR+ML      ++ TL
Subjt:  LLEACSSTKNLHSLEQIHALTIRLA-ISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRHTL

Query:  PLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVEDGQKPDGLT
          +L SC+ L SLR G+ VHG ++ NG  +D  N  + I MY +CG++ +AR VFD MPERN +SWS+++  +G++G F E    F +M      P+ +T
Subjt:  PLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVEDGQKPDGLT

Query:  FTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRLQKRFI
        F +LL+ACSH G V+ G + F  M   + + P  EHY CMVD+LGRAG++ EA+  I  M V+P  + WGALLSACRIH + ++A  + ++ +
Subjt:  FTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRLQKRFI

Q9STF3 Pentatricopeptide repeat-containing protein At3g46790, chloroplastic2.5e-5537.79Show/hide
Query:  YAALLEACSSTK----NLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKP
        Y  +L+AC +++    +L   ++IHA   R   S H +I T LV  YA    +  A+ +F     R    ++ +I  ++      ++L  FR M+   K 
Subjt:  YAALLEACSSTK----NLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKP

Query:  IDRH--TLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVED
           +  T+  VL++C  L++L  G+ +HG ++  G    LP  +AL+TMYG+CG L V ++VFD M +R+ VSW++L++ YGVHG   +   +FE M+ +
Subjt:  IDRH--TLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVED

Query:  GQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRLQKR
        G  P  +TF ++L ACSH GLVE GK  F  M     ++P +EHY CMVD+LGRA +++EA K++ +M  EP   +WG+LL +CRIHG  E+A+R  +R
Subjt:  GQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRLQKR

Q9SVH0 Pentatricopeptide repeat-containing protein At4g207704.5e-5237.5Show/hide
Query:  AALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRR-PTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRH
        + +L +C+  + L   +QIH + IR  IS +  I + L++ Y+ C ++  +  IF           +N++I       L  ++L +FRRM  +       
Subjt:  AALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRR-PTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRH

Query:  T-LPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVEDGQKPD
        T    VL SC+ L SL  GRQ HG+VV +G+  D     AL  MY KCG++  AR+ FD +  +N V W+ ++ GYG +G+  E  GL+ +M+  G+KPD
Subjt:  T-LPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVEDGQKPD

Query:  GLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRLQKRFI
        G+TF ++LTACSH GLVE G E    M+    + P L+HY C+VD LGRAG++E+AEKL      +    LW  LLS+CR+HG   +A R+ ++ +
Subjt:  GLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRLQKRFI

Arabidopsis top hitse value%identityAlignment
AT1G06140.1 Pentatricopeptide repeat (PPR) superfamily protein8.9e-5636.52Show/hide
Query:  LLEACSSTKNLHSLEQIHALTIRLA-ISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRHTL
        L++AC +       + +H ++IR + I   D+++  ++  Y  C  L  A  +F  +  R   ++ TLI   +      ++  +FR+ML      ++ TL
Subjt:  LLEACSSTKNLHSLEQIHALTIRLA-ISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRHTL

Query:  PLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVEDGQKPDGLT
          +L SC+ L SLR G+ VHG ++ NG  +D  N  + I MY +CG++ +AR VFD MPERN +SWS+++  +G++G F E    F +M      P+ +T
Subjt:  PLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVEDGQKPDGLT

Query:  FTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRLQKRFI
        F +LL+ACSH G V+ G + F  M   + + P  EHY CMVD+LGRAG++ EA+  I  M V+P  + WGALLSACRIH + ++A  + ++ +
Subjt:  FTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRLQKRFI

AT1G68930.1 pentatricopeptide (PPR) repeat-containing protein1.9e-5334.46Show/hide
Query:  YAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRH
        + ++L AC     ++  +QIHA  IR     H ++ + L+  Y  C  L  A  +F    ++    +  ++  +       +++ IF  M  SG   D +
Subjt:  YAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRH

Query:  TLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVEDGQKPDG
        TL   + +C  +SSL  G Q HG  + +G    +  SN+L+T+YGKCGD+  + ++F+EM  R+ VSW+A+++ Y   G+  E   LF++MV+ G KPDG
Subjt:  TLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVEDGQKPDG

Query:  LTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRLQKRFIE
        +T T +++ACS  GLVE+G+ YF +M   + + P + HY+CM+D+  R+G++EEA + I  M   PD   W  LLSACR  G  E+     +  IE
Subjt:  LTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRLQKRFIE

AT2G33680.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.4e-5539.22Show/hide
Query:  LLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRHTLP
        +L ACS    L   +Q+H+  ++L    H F  T LV  YA    L  A   F     R   L+ +LI  +       ++L ++RRM  +G   +  T+ 
Subjt:  LLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRHTLP

Query:  LVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVEDGQKPDGLTF
         VLK+C+ L++L LG+QVHG  + +GF +++P  +AL TMY KCG L     VF   P ++ VSW+A+++G   +G+  E   LFE M+ +G +PD +TF
Subjt:  LVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVEDGQKPDGLTF

Query:  TALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEV
          +++ACSH G VERG  YF MM     L P ++HY CMVD+L RAGQ++EA++ I    ++    LW  LLSAC+ HGK E+
Subjt:  TALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEV

AT3G46790.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.8e-5637.79Show/hide
Query:  YAALLEACSSTK----NLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKP
        Y  +L+AC +++    +L   ++IHA   R   S H +I T LV  YA    +  A+ +F     R    ++ +I  ++      ++L  FR M+   K 
Subjt:  YAALLEACSSTK----NLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKP

Query:  IDRH--TLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVED
           +  T+  VL++C  L++L  G+ +HG ++  G    LP  +AL+TMYG+CG L V ++VFD M +R+ VSW++L++ YGVHG   +   +FE M+ +
Subjt:  IDRH--TLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVED

Query:  GQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRLQKR
        G  P  +TF ++L ACSH GLVE GK  F  M     ++P +EHY CMVD+LGRA +++EA K++ +M  EP   +WG+LL +CRIHG  E+A+R  +R
Subjt:  GQKPDGLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRLQKR

AT4G20770.1 Pentatricopeptide repeat (PPR) superfamily protein3.2e-5337.5Show/hide
Query:  AALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRR-PTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRH
        + +L +C+  + L   +QIH + IR  IS +  I + L++ Y+ C ++  +  IF           +N++I       L  ++L +FRRM  +       
Subjt:  AALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRR-PTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRH

Query:  T-LPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVEDGQKPD
        T    VL SC+ L SL  GRQ HG+VV +G+  D     AL  MY KCG++  AR+ FD +  +N V W+ ++ GYG +G+  E  GL+ +M+  G+KPD
Subjt:  T-LPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVEDGQKPD

Query:  GLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRLQKRFI
        G+TF ++LTACSH GLVE G E    M+    + P L+HY C+VD LGRAG++E+AEKL      +    LW  LLS+CR+HG   +A R+ ++ +
Subjt:  GLTFTALLTACSHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRLQKRFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAGCTCGCAGGGCACAGTCCCATTCTACGCCGCTCTTCTCGAAGCATGCTCCTCCACCAAGAACCTCCACTCCCTCGAGCAAATCCACGCTCTAACCATAAGACT
CGCCATCTCCCACCACGATTTCATTCGAACCAAGCTCGTCTCCTCCTACGCCGCCTGCGCCCAACTCCGGCAAGCCACCGCCATCTTCTCCTTCGCCACTCGTCGCCCCA
CCTTCCTCTTCAATACCCTCATCAGAGCCCACTCCTCTCTCCGTTTATTCCCTCAATCCCTCTCCATTTTCCGCCGGATGCTCCTCTCCGGAAAACCCATTGACCGCCAC
ACTCTGCCGTTGGTTCTCAAATCGTGCACGGGGCTGTCGTCTCTGCGGCTTGGCCGGCAAGTTCATGGGGTAGTTGTGATTAATGGGTTCTCTGTGGATTTGCCGAATTC
GAACGCGTTGATTACGATGTATGGCAAGTGCGGGGATTTGGGTGTTGCGCGGAAGGTGTTCGATGAAATGCCTGAGAGGAATGAGGTGTCGTGGTCCGCGCTGATGGCTG
GTTATGGAGTGCACGGGAAGTTTGGGGAGGTGTTTGGGTTGTTTGAGAGGATGGTGGAGGATGGGCAGAAGCCAGATGGGCTCACTTTTACAGCTCTTCTTACGGCCTGT
AGCCATGGCGGGTTGGTTGAGAGAGGGAAGGAGTATTTTGGTATGATGAGAATGGGGTTTGATTTGAGGCCTGGATTGGAACATTATACATGTATGGTGGATATGCTGGG
GAGGGCGGGGCAAGTGGAAGAAGCAGAGAAGTTGATAATGGAGATGGAGGTTGAGCCTGATGAGGCGTTGTGGGGTGCTCTGTTGAGTGCTTGTAGAATTCATGGGAAGG
CCGAGGTGGCTGATAGGCTGCAAAAACGGTTTATCGAGGACAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCAGCTCGCAGGGCACAGTCCCATTCTACGCCGCTCTTCTCGAAGCATGCTCCTCCACCAAGAACCTCCACTCCCTCGAGCAAATCCACGCTCTAACCATAAGACT
CGCCATCTCCCACCACGATTTCATTCGAACCAAGCTCGTCTCCTCCTACGCCGCCTGCGCCCAACTCCGGCAAGCCACCGCCATCTTCTCCTTCGCCACTCGTCGCCCCA
CCTTCCTCTTCAATACCCTCATCAGAGCCCACTCCTCTCTCCGTTTATTCCCTCAATCCCTCTCCATTTTCCGCCGGATGCTCCTCTCCGGAAAACCCATTGACCGCCAC
ACTCTGCCGTTGGTTCTCAAATCGTGCACGGGGCTGTCGTCTCTGCGGCTTGGCCGGCAAGTTCATGGGGTAGTTGTGATTAATGGGTTCTCTGTGGATTTGCCGAATTC
GAACGCGTTGATTACGATGTATGGCAAGTGCGGGGATTTGGGTGTTGCGCGGAAGGTGTTCGATGAAATGCCTGAGAGGAATGAGGTGTCGTGGTCCGCGCTGATGGCTG
GTTATGGAGTGCACGGGAAGTTTGGGGAGGTGTTTGGGTTGTTTGAGAGGATGGTGGAGGATGGGCAGAAGCCAGATGGGCTCACTTTTACAGCTCTTCTTACGGCCTGT
AGCCATGGCGGGTTGGTTGAGAGAGGGAAGGAGTATTTTGGTATGATGAGAATGGGGTTTGATTTGAGGCCTGGATTGGAACATTATACATGTATGGTGGATATGCTGGG
GAGGGCGGGGCAAGTGGAAGAAGCAGAGAAGTTGATAATGGAGATGGAGGTTGAGCCTGATGAGGCGTTGTGGGGTGCTCTGTTGAGTGCTTGTAGAATTCATGGGAAGG
CCGAGGTGGCTGATAGGCTGCAAAAACGGTTTATCGAGGACAGCTGA
Protein sequenceShow/hide protein sequence
MPSSQGTVPFYAALLEACSSTKNLHSLEQIHALTIRLAISHHDFIRTKLVSSYAACAQLRQATAIFSFATRRPTFLFNTLIRAHSSLRLFPQSLSIFRRMLLSGKPIDRH
TLPLVLKSCTGLSSLRLGRQVHGVVVINGFSVDLPNSNALITMYGKCGDLGVARKVFDEMPERNEVSWSALMAGYGVHGKFGEVFGLFERMVEDGQKPDGLTFTALLTAC
SHGGLVERGKEYFGMMRMGFDLRPGLEHYTCMVDMLGRAGQVEEAEKLIMEMEVEPDEALWGALLSACRIHGKAEVADRLQKRFIEDS