; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g23680 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g23680
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:16761062..16762800
RNA-Seq ExpressionMoc03g23680
SyntenyMoc03g23680
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]6.9e-6074.27Show/hide
Query:  MRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTCQRGYFREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNP
        MRTQM +ME+MY+EM+ AAGA SRSENR+ R D+ EQRG HLGPV++ HPE  E E +T QRG  REHLNRKR SSLRKGQSPS SHR+SNQQAESS+NP
Subjt:  MRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTCQRGYFREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNP

Query:  ATPAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS
         TP GVITREEFDQL+ +  AQVEALKAKCE+KE S +DGDLGESPFTSD+LEA IP KFK PT+KPYDGS
Subjt:  ATPAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS

XP_022152033.1 uncharacterized protein LOC111019842 [Momordica charantia]1.0e-4295Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS
        +RGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLR +L AQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIP KFKAPTVKPYDGS
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]6.7e-3974.17Show/hide
Query:  DNESEGHTCQRGYFREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDV
        + E E +T QRG  REHLNRKR SSLRKGQSPS SHR+SNQQAESS+NP TP  VITREEFDQL+ +  AQVEALKA CE+KE S +DGDLGE PFT D+
Subjt:  DNESEGHTCQRGYFREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDV

Query:  LEAPIPPKFKAPTVKPYDGS
        LEAPI PKFK PT+KPYDGS
Subjt:  LEAPIPPKFKAPTVKPYDGS

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]1.2e-4358.62Show/hide
Query:  IEAMRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTCQRGYFREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS
        +EAMRTQMR+MEEMYN+M+  AGA SRS +++   D+ EQ   H  PV+EEH             G  R+HLNRKR SS R  ++ +  H++SNQQAESS
Subjt:  IEAMRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTCQRGYFREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS

Query:  HNPATPAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS
        +NP  P GVITREEF+QL+ +  AQVEALK +CE+KE + +DGDLGESPFTSD+LEA IPPKFK PT+K YDGS
Subjt:  HNPATPAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]1.5e-7862.08Show/hide
Query:  MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAHVLPPAHPRTSKTTRGRGGTSKKGARGPAPAPTSENFDALQREIEAMR
        MVQP +STNT DRR L A+D HQREVGA VVEGQ H+GL TEP  RSARIT   L PAHP+  K  RGRGG S++   G APAP+ ENFDALQ+E+EAMR
Subjt:  MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAHVLPPAHPRTSKTTRGRGGTSKKGARGPAPAPTSENFDALQREIEAMR

Query:  TQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTCQRGYFREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAT
        TQM +MEEMYNEM+ A GAGSRSE+R  R                             +RG  R+HL+RKR SSLRKG+SPS SH++SNQQAESS+NP  
Subjt:  TQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTCQRGYFREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAT

Query:  PAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS
        P GVITREEFDQL+ +  AQVE LKA+CE K  + +DGDLGESPFTSD+LEA IP KFK PT+KPYDGS
Subjt:  PAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS

TrEMBL top hitse value%identityAlignment
A0A6J1DDS5 uncharacterized protein LOC1110198424.9e-4395Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS
        +RGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLR +L AQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIP KFKAPTVKPYDGS
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS

A0A6J1DDW5 uncharacterized protein LOC1110196343.4e-6074.27Show/hide
Query:  MRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTCQRGYFREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNP
        MRTQM +ME+MY+EM+ AAGA SRSENR+ R D+ EQRG HLGPV++ HPE  E E +T QRG  REHLNRKR SSLRKGQSPS SHR+SNQQAESS+NP
Subjt:  MRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTCQRGYFREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNP

Query:  ATPAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS
         TP GVITREEFDQL+ +  AQVEALKAKCE+KE S +DGDLGESPFTSD+LEA IP KFK PT+KPYDGS
Subjt:  ATPAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS

A0A6J1DM55 uncharacterized protein LOC1110222673.3e-3974.17Show/hide
Query:  DNESEGHTCQRGYFREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDV
        + E E +T QRG  REHLNRKR SSLRKGQSPS SHR+SNQQAESS+NP TP  VITREEFDQL+ +  AQVEALKA CE+KE S +DGDLGE PFT D+
Subjt:  DNESEGHTCQRGYFREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDV

Query:  LEAPIPPKFKAPTVKPYDGS
        LEAPI PKFK PT+KPYDGS
Subjt:  LEAPIPPKFKAPTVKPYDGS

A0A6J1DPN4 uncharacterized protein LOC1110230605.7e-4458.62Show/hide
Query:  IEAMRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTCQRGYFREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS
        +EAMRTQMR+MEEMYN+M+  AGA SRS +++   D+ EQ   H  PV+EEH             G  R+HLNRKR SS R  ++ +  H++SNQQAESS
Subjt:  IEAMRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTCQRGYFREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS

Query:  HNPATPAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS
        +NP  P GVITREEF+QL+ +  AQVEALK +CE+KE + +DGDLGESPFTSD+LEA IPPKFK PT+K YDGS
Subjt:  HNPATPAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS

A0A6J1DZJ1 uncharacterized protein LOC1110257387.2e-7962.08Show/hide
Query:  MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAHVLPPAHPRTSKTTRGRGGTSKKGARGPAPAPTSENFDALQREIEAMR
        MVQP +STNT DRR L A+D HQREVGA VVEGQ H+GL TEP  RSARIT   L PAHP+  K  RGRGG S++   G APAP+ ENFDALQ+E+EAMR
Subjt:  MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAHVLPPAHPRTSKTTRGRGGTSKKGARGPAPAPTSENFDALQREIEAMR

Query:  TQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTCQRGYFREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAT
        TQM +MEEMYNEM+ A GAGSRSE+R  R                             +RG  R+HL+RKR SSLRKG+SPS SH++SNQQAESS+NP  
Subjt:  TQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTCQRGYFREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAT

Query:  PAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS
        P GVITREEFDQL+ +  AQVE LKA+CE K  + +DGDLGESPFTSD+LEA IP KFK PT+KPYDGS
Subjt:  PAGVITREEFDQLRDQLGAQVEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAGTGGTAGAGGGGCAAGGTCACGA
CGGCCTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCATGTCCTACCACCTGCGCATCCAAGGACATCCAAGACCACCCGTGGCCGAGGTGGGACCTCTA
AGAAGGGCGCCCGGGGTCCAGCCCCGGCTCCAACAAGTGAGAACTTTGACGCACTCCAGAGAGAAATTGAGGCAATGCGCACACAAATGCGGTCCATGGAGGAAATGTAT
AACGAGATGATACTAGCTGCAGGCGCAGGGTCTCGATCTGAAAATCGAATGACGCGCATTGACATACGCGAGCAAAGGGGTTCCCACCTCGGCCCAGTCGAGGAGGAACA
TCCCGAAGACAACGAGAGTGAGGGACACACTTGCCAGAGAGGATACTTTCGTGAACACCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCT
CACACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAACCCAGCAACTCCTGCAGGAGTGATTACAAGGGAGGAGTTCGACCAGCTGAGGGACCAGCTCGGCGCTCAG
GTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTTCACTAAACGATGGCGACTTGGGAGAATCGCCCTTCACCTCGGACGTTTTGGAAGCACCGATCCCTCCGAA
GTTCAAAGCTCCTACCGTGAAGCCTTATGATGGGTCGAATTTAGGGCTCGTTGTAACGTTCATGTTTCTTGTTTCTGTTTCTTTATTTTTAATGAAGAAAAATGTGTTGC
ATGGTTTCAACCTCCAAGAATTGGAACAAATTGGAAATAGGAATAAGAAAAGAGAAACTTGTTTTGATTCTGCAACAGTTGATGATAGGGGGGACGGGGTGGGCAGTGAC
GTTTATGAAACGGATTTCTTCGTGGACGAAGGCTTCGTAGGAACTGCAGATGAGACGACCCACTTTCCTGATTGTTCATCTTCTCCACTACCAATTTCCCCAGCATTTGG
TAATATGGGTCACTTACGTCTATTGGATCGAACCCGTGGGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTCGGAGCAGCAGTGGTAGAGGGGCAAGGTCACGA
CGGCCTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCGCATGTCCTACCACCTGCGCATCCAAGGACATCCAAGACCACCCGTGGCCGAGGTGGGACCTCTA
AGAAGGGCGCCCGGGGTCCAGCCCCGGCTCCAACAAGTGAGAACTTTGACGCACTCCAGAGAGAAATTGAGGCAATGCGCACACAAATGCGGTCCATGGAGGAAATGTAT
AACGAGATGATACTAGCTGCAGGCGCAGGGTCTCGATCTGAAAATCGAATGACGCGCATTGACATACGCGAGCAAAGGGGTTCCCACCTCGGCCCAGTCGAGGAGGAACA
TCCCGAAGACAACGAGAGTGAGGGACACACTTGCCAGAGAGGATACTTTCGTGAACACCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCT
CACACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAACCCAGCAACTCCTGCAGGAGTGATTACAAGGGAGGAGTTCGACCAGCTGAGGGACCAGCTCGGCGCTCAG
GTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTTCACTAAACGATGGCGACTTGGGAGAATCGCCCTTCACCTCGGACGTTTTGGAAGCACCGATCCCTCCGAA
GTTCAAAGCTCCTACCGTGAAGCCTTATGATGGGTCGAATTTAGGGCTCGTTGTAACGTTCATGTTTCTTGTTTCTGTTTCTTTATTTTTAATGAAGAAAAATGTGTTGC
ATGGTTTCAACCTCCAAGAATTGGAACAAATTGGAAATAGGAATAAGAAAAGAGAAACTTGTTTTGATTCTGCAACAGTTGATGATAGGGGGGACGGGGTGGGCAGTGAC
GTTTATGAAACGGATTTCTTCGTGGACGAAGGCTTCGTAGGAACTGCAGATGAGACGACCCACTTTCCTGATTGTTCATCTTCTCCACTACCAATTTCCCCAGCATTTGG
TAATATGGGTCACTTACGTCTATTGGATCGAACCCGTGGGGCTTAG
Protein sequenceShow/hide protein sequence
MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRRSARITAHVLPPAHPRTSKTTRGRGGTSKKGARGPAPAPTSENFDALQREIEAMRTQMRSMEEMY
NEMILAAGAGSRSENRMTRIDIREQRGSHLGPVEEEHPEDNESEGHTCQRGYFREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITREEFDQLRDQLGAQ
VEALKAKCEQKEGSLNDGDLGESPFTSDVLEAPIPPKFKAPTVKPYDGSNLGLVVTFMFLVSVSLFLMKKNVLHGFNLQELEQIGNRNKKRETCFDSATVDDRGDGVGSD
VYETDFFVDEGFVGTADETTHFPDCSSSPLPISPAFGNMGHLRLLDRTRGA