; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g23740 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g23740
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:16803455..16806770
RNA-Seq ExpressionMoc03g23740
SyntenyMoc03g23740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG57064.1 hypothetical protein EZV62_018377 [Acer yangbiense]6.7e-0735.85Show/hide
Query:  VHHFDFLASDHRPILTSWLVEGDGSEGERR-GQRPRRFENSWYQMGECKKIIQKVWSNRGEI--NMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKE
        V H  + +SDHRP+L S+    DG +G R+  ++P +FE+ W +  EC K+I++ W N  E+  ++   +RKL  C  +L  W+ ++  GSLR  I  K+
Subjt:  VHHFDFLASDHRPILTSWLVEGDGSEGERR-GQRPRRFENSWYQMGECKKIIQKVWSNRGEI--NMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKE

Query:  VEIWDL
         E+ +L
Subjt:  VEIWDL

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]2.3e-0737.68Show/hide
Query:  NPNEQDMRKHKETVIHLFWACKVTKELWRSLSNFNLGLFLIDRGTWSMDDYWNWILDNASAADLESLMI
        N NE + RK +ET  H+ W CKV K++W + +      F IDR  W+  +YW W++D A   +    MI
Subjt:  NPNEQDMRKHKETVIHLFWACKVTKELWRSLSNFNLGLFLIDRGTWSMDDYWNWILDNASAADLESLMI

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]4.5e-2751.79Show/hide
Query:  VHHFDFLASDHRPILTSWLVEGDGSEGERRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEI
        + H +FLASDHRPIL  WL  G+ + G R+G+RP RFE  W+   ECK+I+++VW+ +G++    FQ K+ +CL EL KWN  RL GSLRGAI RKEVEI
Subjt:  VHHFDFLASDHRPILTSWLVEGDGSEGERRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEI

Query:  WDLTLDRSDSWR
          +  D +  WR
Subjt:  WDLTLDRSDSWR

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]7.4e-1447Show/hide
Query:  VHHFDFLASDHRPILTSWLVEGDGSEGERRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEI
        V H + L+SDHRPIL SW  E   +    + QR  RFE SW Q+  C+ II   W +   I +  FQ K+ +CL+ L +WNK RLN SL+GAIA KE E+
Subjt:  VHHFDFLASDHRPILTSWLVEGDGSEGERRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEI

XP_023899730.1 uncharacterized protein LOC112011598 [Quercus suber]5.7e-0628.22Show/hide
Query:  VHHFDFLASDHRPILTSWLVEGDGSEGERRGQRPRRFENSWYQMGECKKIIQKVWSNR-----------GEINMVTFQRK--LQTCLAELGKW-NKSRLN
        + H +   SDHRPIL S  + G   E +R  ++P RFE  W    EC  II + W  R           GE+++V   +K   + C  E   W  +SR+ 
Subjt:  VHHFDFLASDHRPILTSWLVEGDGSEGERRGQRPRRFENSWYQMGECKKIIQKVWSNR-----------GEINMVTFQRK--LQTCLAELGKW-NKSRLN

Query:  GSLRG----------AIARKEVEIWDLTLDRSDSWR-SENVIGHIAVSYFRQLFTTNNPNEQD
            G          +  RK         D +  W+ +E VI  + + Y+  LF ++NP   D
Subjt:  GSLRG----------AIARKEVEIWDLTLDRSDSWR-SENVIGHIAVSYFRQLFTTNNPNEQD

TrEMBL top hitse value%identityAlignment
A0A2N9EV35 Uncharacterized protein5.9e-0928.22Show/hide
Query:  VHHFDFLASDHRPILTSWLVEGDGSEGERRGQRPRRFENSWYQMGECKKIIQKVWSNRGEIN--MVTFQRKLQTCLAELGKWNKSRLNGSL---------
        V H    +SDH PIL      G       R ++P RFE  W    EC++II+ +W   G++   M     KL+ C   L +W+K +    +         
Subjt:  VHHFDFLASDHRPILTSWLVEGDGSEGERRGQRPRRFENSWYQMGECKKIIQKVWSNRGEIN--MVTFQRKLQTCLAELGKWNKSRLNGSL---------

Query:  -------------RGAIARKEVEIWDLTLDRSDSWRSE-NVIGHIAVSYFRQLFTTNNPNEQD
                     + A  RK+       +D  D W ++ + +G IA  YF++LFTT+NP+  D
Subjt:  -------------RGAIARKEVEIWDLTLDRSDSWRSE-NVIGHIAVSYFRQLFTTNNPNEQD

A0A2N9GL12 Reverse transcriptase domain-containing protein5.9e-0928.22Show/hide
Query:  VHHFDFLASDHRPILTSWLVEGDGSEGERRGQRPRRFENSWYQMGECKKIIQKVWSNRGEIN--MVTFQRKLQTCLAELGKWNKSRLNGSL---------
        V H    +SDH PIL      G       R ++P RFE  W    EC++II+ +W   G++   M     KL+ C   L +W+K +    +         
Subjt:  VHHFDFLASDHRPILTSWLVEGDGSEGERRGQRPRRFENSWYQMGECKKIIQKVWSNRGEIN--MVTFQRKLQTCLAELGKWNKSRLNGSL---------

Query:  -------------RGAIARKEVEIWDLTLDRSDSWRSE-NVIGHIAVSYFRQLFTTNNPNEQD
                     + A  RK+       +D  D W ++ + +G IA  YF++LFTT+NP+  D
Subjt:  -------------RGAIARKEVEIWDLTLDRSDSWRSE-NVIGHIAVSYFRQLFTTNNPNEQD

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X11.1e-0737.68Show/hide
Query:  NPNEQDMRKHKETVIHLFWACKVTKELWRSLSNFNLGLFLIDRGTWSMDDYWNWILDNASAADLESLMI
        N NE + RK +ET  H+ W CKV K++W + +      F IDR  W+  +YW W++D A   +    MI
Subjt:  NPNEQDMRKHKETVIHLFWACKVTKELWRSLSNFNLGLFLIDRGTWSMDDYWNWILDNASAADLESLMI

A0A6J1DRA0 uncharacterized protein LOC1110224232.2e-2751.79Show/hide
Query:  VHHFDFLASDHRPILTSWLVEGDGSEGERRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEI
        + H +FLASDHRPIL  WL  G+ + G R+G+RP RFE  W+   ECK+I+++VW+ +G++    FQ K+ +CL EL KWN  RL GSLRGAI RKEVEI
Subjt:  VHHFDFLASDHRPILTSWLVEGDGSEGERRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEI

Query:  WDLTLDRSDSWR
          +  D +  WR
Subjt:  WDLTLDRSDSWR

A0A6J1DUG8 uncharacterized protein LOC1110241353.6e-1447Show/hide
Query:  VHHFDFLASDHRPILTSWLVEGDGSEGERRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEI
        V H + L+SDHRPIL SW  E   +    + QR  RFE SW Q+  C+ II   W +   I +  FQ K+ +CL+ L +WNK RLN SL+GAIA KE E+
Subjt:  VHHFDFLASDHRPILTSWLVEGDGSEGERRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGTGCACCATTTTGATTTCTTAGCCTCGGATCATAGGCCAATTCTTACTTCTTGGCTTGTTGAGGGTGACGGTTCAGAAGGGGAAAGAAGGGGTCAAAGACCGCG
CCGGTTTGAAAATTCGTGGTATCAAATGGGCGAATGTAAGAAGATCATTCAAAAAGTGTGGTCAAATCGAGGGGAGATCAATATGGTAACGTTCCAACGAAAGCTCCAAA
CTTGCTTAGCCGAACTTGGTAAGTGGAATAAATCAAGGCTTAATGGCTCTCTTCGTGGTGCGATAGCGAGGAAAGAAGTTGAAATTTGGGATCTTACTCTGGATAGATCT
GACAGTTGGCGATCAGAGAATGTGATCGGCCATATTGCTGTCTCCTACTTTAGGCAACTTTTCACGACAAATAATCCTAATGAGCAGGACATGAGGAAGCACAAAGAGAC
TGTGATTCACCTCTTTTGGGCCTGCAAGGTAACAAAGGAGTTATGGCGTTCTTTATCGAATTTTAATTTGGGGTTATTTCTGATTGATAGAGGCACATGGTCGATGGATG
ATTACTGGAACTGGATTTTGGACAATGCAAGCGCGGCGGATCTGGAAAGCTTGATGATATGGAGTGAAGAGATTGGAGGCAGAAGCAGTGTTGGGAGGCCTTCGTCATCT
GCTGTCACGTGCGCCTTCTCTTCCTCTTCGAGTGGAAACCGAAAGCCTAAAAACTCTCTGTGGTTTATCTCTTTTGTGAAAGTGGATAGAAGGGCCAATTTATGTGCTCA
CACAGTTACGAAAAGATCCCGTGAGAAAAGGGAAAGTGTATTTTGGGATAATTGTATCCCTAGTTTGCTGAACTGTCTAGCCAATCAGGATCTTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAGTGCACCATTTTGATTTCTTAGCCTCGGATCATAGGCCAATTCTTACTTCTTGGCTTGTTGAGGGTGACGGTTCAGAAGGGGAAAGAAGGGGTCAAAGACCGCG
CCGGTTTGAAAATTCGTGGTATCAAATGGGCGAATGTAAGAAGATCATTCAAAAAGTGTGGTCAAATCGAGGGGAGATCAATATGGTAACGTTCCAACGAAAGCTCCAAA
CTTGCTTAGCCGAACTTGGTAAGTGGAATAAATCAAGGCTTAATGGCTCTCTTCGTGGTGCGATAGCGAGGAAAGAAGTTGAAATTTGGGATCTTACTCTGGATAGATCT
GACAGTTGGCGATCAGAGAATGTGATCGGCCATATTGCTGTCTCCTACTTTAGGCAACTTTTCACGACAAATAATCCTAATGAGCAGGACATGAGGAAGCACAAAGAGAC
TGTGATTCACCTCTTTTGGGCCTGCAAGGTAACAAAGGAGTTATGGCGTTCTTTATCGAATTTTAATTTGGGGTTATTTCTGATTGATAGAGGCACATGGTCGATGGATG
ATTACTGGAACTGGATTTTGGACAATGCAAGCGCGGCGGATCTGGAAAGCTTGATGATATGGAGTGAAGAGATTGGAGGCAGAAGCAGTGTTGGGAGGCCTTCGTCATCT
GCTGTCACGTGCGCCTTCTCTTCCTCTTCGAGTGGAAACCGAAAGCCTAAAAACTCTCTGTGGTTTATCTCTTTTGTGAAAGTGGATAGAAGGGCCAATTTATGTGCTCA
CACAGTTACGAAAAGATCCCGTGAGAAAAGGGAAAGTGTATTTTGGGATAATTGTATCCCTAGTTTGCTGAACTGTCTAGCCAATCAGGATCTTCTTTAG
Protein sequenceShow/hide protein sequence
MVVHHFDFLASDHRPILTSWLVEGDGSEGERRGQRPRRFENSWYQMGECKKIIQKVWSNRGEINMVTFQRKLQTCLAELGKWNKSRLNGSLRGAIARKEVEIWDLTLDRS
DSWRSENVIGHIAVSYFRQLFTTNNPNEQDMRKHKETVIHLFWACKVTKELWRSLSNFNLGLFLIDRGTWSMDDYWNWILDNASAADLESLMIWSEEIGGRSSVGRPSSS
AVTCAFSSSSSGNRKPKNSLWFISFVKVDRRANLCAHTVTKRSREKRESVFWDNCIPSLLNCLANQDLL