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Moc03g24190 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g24190
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr3:17186797..17187215
RNA-Seq ExpressionMoc03g24190
SyntenyMoc03g24190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER41007.1 pentatricopeptide repeat-containing protein [Striga asiatica]7.3e-1067.24Show/hide
Query:  ACWHCDLFRAVPAVEQRVRTASASLGQAVATRHSARERFRCRQADRRAGPSGTRLWQS
        ACWH   FRAVP +EQRVRTAS S GQA ATRHSAR+R R R A  R  P+G R WQS
Subjt:  ACWHCDLFRAVPAVEQRVRTASASLGQAVATRHSARERFRCRQADRRAGPSGTRLWQS
TrEMBL top hitse value%identityAlignment
A0A5A7Q9B3 Pentatricopeptide repeat-containing protein3.5e-1067.24Show/hide
Query:  ACWHCDLFRAVPAVEQRVRTASASLGQAVATRHSARERFRCRQADRRAGPSGTRLWQS
        ACWH   FRAVP +EQRVRTAS S GQA ATRHSAR+R R R A  R  P+G R WQS
Subjt:  ACWHCDLFRAVPAVEQRVRTASASLGQAVATRHSARERFRCRQADRRAGPSGTRLWQS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTCGCACCTGCTTGCTGGCACTGCGATCTCTTCAGAGCGGTTCCGGCGGTGGAGCAGAGGGTTCGCACCGCCTCCGCCTCGTTAGGGCAAGCCGTAGCCACCAG
GCACTCCGCCAGAGAACGGTTTAGATGCCGGCAAGCCGATCGCCGCGCCGGACCGTCCGGAACTCGCCTGTGGCAGTCTCGGAGAGCCTGCTCCAGCCGCTCGCAACCGC
CAACGCCGCCGCCGCTGATCGGAGCTTCGCCGGTAGGTAACATCCCATTGCTTTCCCATGTGGCTATGGGGTCCCACACCATTTGGGAGGGAAAGGAAAGTTGCTCTGCA
AATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACTTCGCACCTGCTTGCTGGCACTGCGATCTCTTCAGAGCGGTTCCGGCGGTGGAGCAGAGGGTTCGCACCGCCTCCGCCTCGTTAGGGCAAGCCGTAGCCACCAG
GCACTCCGCCAGAGAACGGTTTAGATGCCGGCAAGCCGATCGCCGCGCCGGACCGTCCGGAACTCGCCTGTGGCAGTCTCGGAGAGCCTGCTCCAGCCGCTCGCAACCGC
CAACGCCGCCGCCGCTGATCGGAGCTTCGCCGGTAGGTAACATCCCATTGCTTTCCCATGTGGCTATGGGGTCCCACACCATTTGGGAGGGAAAGGAAAGTTGCTCTGCA
AATTAG
Protein sequenceShow/hide protein sequence
MDFAPACWHCDLFRAVPAVEQRVRTASASLGQAVATRHSARERFRCRQADRRAGPSGTRLWQSRRACSSRSQPPTPPPLIGASPVGNIPLLSHVAMGSHTIWEGKESCSA
N