; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g26080 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g26080
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description60S ribosomal protein L18a-like protein
Genome locationchr3:18792326..18795720
RNA-Seq ExpressionMoc03g26080
SyntenyMoc03g26080
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044804 - AT1G29970-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147407.1 60S ribosomal protein L18a-like protein [Cucumis sativus]4.7e-7384.91Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGK++ V GDP SQYHYGTFQGVANYY S  QPQPQPQP SVVGFPQPVA P VSG  P YHGHLGYQAVPVQGYAI+EGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+T G E W
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

XP_008444018.1 PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo]2.5e-7486.16Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGK+S V GDP SQYHYGTFQGVANYY S  QPQPQPQP SVVGFPQPVAPP VSG  P YHGHLGYQAVPVQGYAI+EGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+T G E W
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

XP_022140257.1 60S ribosomal protein L18a-like protein [Momordica charantia]4.4e-87100Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

XP_022927552.1 60S ribosomal protein L18a-like protein [Cucurbita moschata]1.3e-7083.65Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGK+SAV GDPQSQYHYGTFQGVANYY SA +PQPQP P SVVGFP  VAPPR    HP YHGHL YQAVPVQGYAIIEGRP+ EARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLF+IGFFLGGIPWYVGAF+VLFVRVDYREKPGY+AC IASVLA++AITFGV+KG E W
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

XP_023519744.1 60S ribosomal protein L18a-like protein [Cucurbita pepo subsp. pepo]3.7e-7083.65Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGK+SAV GDPQSQYHYGTFQGVANYY SA QPQPQP P SVVGFP  VAPPR    HP YHGHL YQAVPVQGYAIIEG P+ EARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLF+IGFFLGGIPWYVGAF+VLFVRVDYREKPGY+AC IASVLA++AITFGV+KG E W
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

TrEMBL top hitse value%identityAlignment
A0A0A0M051 Uncharacterized protein2.3e-7384.91Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGK++ V GDP SQYHYGTFQGVANYY S  QPQPQPQP SVVGFPQPVA P VSG  P YHGHLGYQAVPVQGYAI+EGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+T G E W
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

A0A1S3B9D9 60S ribosomal protein L18a-like protein1.2e-7486.16Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGK+S V GDP SQYHYGTFQGVANYY S  QPQPQPQP SVVGFPQPVAPP VSG  P YHGHLGYQAVPVQGYAI+EGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+T G E W
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

A0A6J1CGC1 60S ribosomal protein L18a-like protein2.1e-87100Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

A0A6J1EHH7 60S ribosomal protein L18a-like protein6.2e-7183.65Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MSGDGK+SAV GDPQSQYHYGTFQGVANYY SA +PQPQP P SVVGFP  VAPPR    HP YHGHL YQAVPVQGYAIIEGRP+ EARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLF+IGFFLGGIPWYVGAF+VLFVRVDYREKPGY+AC IASVLA++AITFGV+KG E W
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

A0A6J1KIR0 60S ribosomal protein L18a-like protein3.1e-7083.65Show/hide
Query:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW
        MS DGK+SAV GDPQSQYHYGTFQGVANYY SA QPQPQP P SVVGFP  VAPPR    HP YHGHL YQAVPVQGYAIIEGRP+ EARLPCCGIGMGW
Subjt:  MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGW

Query:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FLF+IGFFLGGIPWYVGAF+VLFVRVDYREKPGY+AC IASVLA++AITFGV+KG E W
Subjt:  FLFVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

SwissProt top hitse value%identityAlignment
Q8L9S1 60S ribosomal protein L18a-like protein2.3e-3050.98Show/hide
Query:  QSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYH--GHLG----YQAVP--VQGYAIIEGRPYQEARLPCCGIGMGWFLFVIG
        Q QY+YGTFQGVAN+      P P P P     F QP  P      H Y +  GH G     Q  P  V  Y ++E RP  E  LPCCG+GMGWFLF++G
Subjt:  QSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYH--GHLG----YQAVP--VQGYAIIEGRPYQEARLPCCGIGMGWFLFVIG

Query:  FFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        F  GGIPWY+GAFIVL   VD+REK GYVAC IASV+ L+A+  G+T     W
Subjt:  FFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

Arabidopsis top hitse value%identityAlignment
AT1G17080.1 Ribosomal protein L18ae family1.3e-4155.06Show/hide
Query:  DGKNSAVLGDPQSQYH-YGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGWFL
        + K+     +  +Q+H YGTFQGV+NY      P PQ     V GFPQP APP V      Y+ H GYQ VPV G  + EGRP ++ RLPCCGIG+GWFL
Subjt:  DGKNSAVLGDPQSQYH-YGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGWFL

Query:  FVIGFFLGGIPWYVGAFIVLF-VRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        F++GFFLG IPWYVG FI++F  R+DYREKPGY+AC IA++LA +A+  GV+KGA+ W
Subjt:  FVIGFFLGGIPWYVGAFIVLF-VRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

AT1G29970.1 60S ribosomal protein L18A-11.6e-3150.98Show/hide
Query:  QSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYH--GHLG----YQAVP--VQGYAIIEGRPYQEARLPCCGIGMGWFLFVIG
        Q QY+YGTFQGVAN+      P P P P     F QP  P      H Y +  GH G     Q  P  V  Y ++E RP  E  LPCCG+GMGWFLF++G
Subjt:  QSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYH--GHLG----YQAVP--VQGYAIIEGRPYQEARLPCCGIGMGWFLFVIG

Query:  FFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        F  GGIPWY+GAFIVL   VD+REK GYVAC IASV+ L+A+  G+T     W
Subjt:  FFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

AT1G29970.2 60S ribosomal protein L18A-11.9e-2752.99Show/hide
Query:  QSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYH--GHLG----YQAVP--VQGYAIIEGRPYQEARLPCCGIGMGWFLFVIG
        Q QY+YGTFQGVAN+      P P P P     F QP  P      H Y +  GH G     Q  P  V  Y ++E RP  E  LPCCG+GMGWFLF++G
Subjt:  QSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYH--GHLG----YQAVP--VQGYAIIEGRPYQEARLPCCGIGMGWFLFVIG

Query:  FFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIA
        F  GGIPWY+GAFIVL   VD+REK GYVAC IA
Subjt:  FFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIA

AT1G29970.3 60S ribosomal protein L18A-12.3e-2540Show/hide
Query:  QSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYH--GHLG----YQAVP--VQGYAIIEGRPYQEARLPCCGIGMGWFL----
        Q QY+YGTFQGVAN+      P P P P     F QP  P      H Y +  GH G     Q  P  V  Y ++E RP  E  LPCCG+GMGWFL    
Subjt:  QSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYH--GHLG----YQAVP--VQGYAIIEGRPYQEARLPCCGIGMGWFL----

Query:  --------------------------------------FVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
                                              F++GF  GGIPWY+GAFIVL   VD+REK GYVAC IASV+ L+A+  G+T     W
Subjt:  --------------------------------------FVIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW

AT1G53560.1 Ribosomal protein L18ae family1.2e-3454.61Show/hide
Query:  YGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQA-VPVQGYAIIEGRPYQEARLPCCGIGMGWFLFVIGFFLGGIPWYVGA
        YGTFQGV   YP  S P P P  H V+G PQP  PP    PH     H   Q    V GY + +GRP ++ RLPCCG+G+GWFLF+IGF LG IPWYVG 
Subjt:  YGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQA-VPVQGYAIIEGRPYQEARLPCCGIGMGWFLFVIGFFLGGIPWYVGA

Query:  FIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW
        FI++  R+D REKPGYVAC IA+V+A + I FGV  G   W
Subjt:  FIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGCGACGGGAAAAACAGCGCGGTATTGGGCGATCCACAGAGTCAATACCATTACGGTACGTTTCAGGGTGTCGCAAACTATTATCCTTCTGCCTCACAG
CCGCAGCCGCAGCCGCAACCCCATTCTGTCGTTGGTTTCCCTCAACCGGTTGCGCCGCCCCGAGTTTCTGGCCCTCACCCATATTACCATGGACATCTGGGTTAC
CAAGCCGTCCCGGTTCAAGGTTATGCTATTATTGAGGGAAGACCTTATCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGCTGGTTCTTGTTTGTAATT
GGGTTCTTTCTTGGTGGCATTCCTTGGTATGTTGGAGCTTTTATCGTACTCTTTGTACGAGTGGATTACCGAGAAAAGCCTGGATATGTAGCATGCGTAATCGCT
TCAGTCCTTGCCCTCGTTGCTATAACTTTTGGTGTCACCAAGGGAGCTGAGTCGTGGATGGTCGTCCCGTTTTCTGCTCGGAATGAACAGCGGGATGGGGCAGGA
TCAAGGGTGCTTTTTCGATTCCGGTCGCTGAAGGAAAATTTGCAAAAGAACTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGCGACGGGAAAAACAGCGCGGTATTGGGCGATCCACAGAGTCAATACCATTACGGTACGTTTCAGGGTGTCGCAAACTATTATCCTTCTGCCTCACAG
CCGCAGCCGCAGCCGCAACCCCATTCTGTCGTTGGTTTCCCTCAACCGGTTGCGCCGCCCCGAGTTTCTGGCCCTCACCCATATTACCATGGACATCTGGGTTAC
CAAGCCGTCCCGGTTCAAGGTTATGCTATTATTGAGGGAAGACCTTATCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGCTGGTTCTTGTTTGTAATT
GGGTTCTTTCTTGGTGGCATTCCTTGGTATGTTGGAGCTTTTATCGTACTCTTTGTACGAGTGGATTACCGAGAAAAGCCTGGATATGTAGCATGCGTAATCGCT
TCAGTCCTTGCCCTCGTTGCTATAACTTTTGGTGTCACCAAGGGAGCTGAGTCGTGGATGGTCGTCCCGTTTTCTGCTCGGAATGAACAGCGGGATGGGGCAGGA
TCAAGGGTGCTTTTTCGATTCCGGTCGCTGAAGGAAAATTTGCAAAAGAACTTTTAG
Protein sequenceShow/hide protein sequence
MSGDGKNSAVLGDPQSQYHYGTFQGVANYYPSASQPQPQPQPHSVVGFPQPVAPPRVSGPHPYYHGHLGYQAVPVQGYAIIEGRPYQEARLPCCGIGMGWFLFVI
GFFLGGIPWYVGAFIVLFVRVDYREKPGYVACVIASVLALVAITFGVTKGAESWMVVPFSARNEQRDGAGSRVLFRFRSLKENLQKNF