; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g26740 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g26740
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionplant-specific TFIIB-related protein PTF2
Genome locationchr3:19246459..19247586
RNA-Seq ExpressionMoc03g26740
SyntenyMoc03g26740
Gene Ontology termsGO:0070897 - transcription preinitiation complex assembly (biological process)
GO:0005634 - nucleus (cellular component)
GO:0097550 - transcriptional preinitiation complex (cellular component)
GO:0017025 - TBP-class protein binding (molecular function)
InterPro domainsIPR000812 - Transcription factor TFIIB
IPR013137 - Zinc finger, TFIIB-type
IPR036915 - Cyclin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573303.1 Plant-specific TFIIB-related protein PTF2, partial [Cucurbita argyrosperma subsp. sororia]3.7e-16781Show/hide
Query:  SCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEG
        SCKNC  RSLFRDDVSGNLICSSC IVQEFDNY+AQL  +NGPQGTFVRVGTS SG VLNYKDKKI+EAQKIIED+TFRLG + SKSNDVR+LVSTITEG
Subjt:  SCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEG

Query:  EYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ
        EYG G WF ILVGAC+YVSMRKDN PLPMSEVASTIECD+HELGRMVLRVVDFLD KG  FP F+IVGSLERA RNSPSFS+VEADT++ +VKQ I +LQ
Subjt:  EYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ

Query:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGAKG
        CAMKWFLTTGRQPL MVAAVLVL+S LN V VSID+VAM+VHA VST KKRYRELL ALVEVGKKLPWGK      +VKNAPFVIQYMELKSMSN   +G
Subjt:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGAKG

Query:  KNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR
        KN E+VGIDLQ AV+ECLRKE +Y SEVNNLEDDSQYFEL   S  DESSCD RNKLNISHECLSLIY KFL+EM HLR
Subjt:  KNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR

XP_008443157.1 PREDICTED: transcription factor IIIB 50 kDa subunit [Cucumis melo]3.6e-17080.47Show/hide
Query:  SCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEG
        SCK+C SRS+FRDDVSGNLICSSC IVQEF+NYEAQL  INGPQGTFVRVGTS SG VLNYKDKK++EAQK+IED+TFRLG + SKSNDVR+LVSTITEG
Subjt:  SCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEG

Query:  EYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ
        EYGLG WFPILVGACAYVSMRKDN PL MSEVAS +ECD+HELGRMV+RVVDFLD +G EFPVF+IVGSLERA RNSPSFSR+EAD +ER+VKQ I +LQ
Subjt:  EYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ

Query:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGAKG
        CAMKWFLTTGRQPL MVAAVLVL+S+LN V+VS++NVAM+VHA VST KKRYRELL+ALVEVGKKLPWGK      +VKNAPFVIQYMELKSMSNA  KG
Subjt:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGAKG

Query:  KNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR
        K+ ENVGIDLQ AV+ECLRKE EY SEVNNLEDDSQYFELQ     DES+CD  N+LNISHECLSLIYNKFL+EM  LR
Subjt:  KNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR

XP_022156843.1 plant-specific TFIIB-related protein PTF2 [Momordica charantia]4.3e-18785.64Show/hide
Query:  MRSCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTIT
        M SCKNC S+SLFRDDVSGNLICSSC IVQEFDNYEAQ+C INGPQGTFVRVGTS SGGVLNYKDKKIFEAQKIIEDVTFRLGL+PSKSNDVRLLVSTIT
Subjt:  MRSCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTIT

Query:  EGEYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILM
        +GEYGLG WFPILVGACAYVSMRKDNIPLPMSEVASTIECD+HELGRMVLRVVDFLD KG EFPVFNIVGSLER  RNSPSFSRVEADTMERM+KQ I +
Subjt:  EGEYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILM

Query:  LQCAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGA
        LQCAMKWFLTTGRQPL MVAAVLVL+SELN V+VSIDNVAM+VHANVSTSKKRY+ELLQALVEVGKKLPWGK      +VKNAPFVIQYMELKSM+NAGA
Subjt:  LQCAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGA

Query:  KGKNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQ----------------SKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR
        KGKN ENVGIDLQDAVNECLRK+FEYG EVNNLEDDSQYFELQ                S SR DES+ DYRNKL+ISHECLSLIYNKFLNEMDHLR
Subjt:  KGKNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQ----------------SKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR

XP_023542889.1 plant-specific TFIIB-related protein PTF2 [Cucurbita pepo subsp. pepo]2.9e-16781Show/hide
Query:  SCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEG
        SCKNC  RSLFRDDVSGNLICSSC IVQEFDNY+AQL  +NGPQGTFVRVGTS SG VLNYKDKKI+EAQKIIED+TFRLG + SKSNDVR+LVSTITEG
Subjt:  SCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEG

Query:  EYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ
        EYG G WF ILVGAC+YVSMRKDN PLPMSEVASTIECD+HELGRMVLRVVDFLD KG  FP F+IVGSLERA RNSPSFS+VEADT++ +VKQ I +LQ
Subjt:  EYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ

Query:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGAKG
        CAMKWFLTTGRQPL MVAAVLVL+S LN V VSID+VAM+VHA VST KKRYRELL ALVEVGKKLPWGK      +VKNAPFVIQYMELKSMSN   +G
Subjt:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGAKG

Query:  KNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR
        KN E+VGIDLQ AV+ECLRKE +Y SEVNNLEDDSQYFEL   S  DESSCD RNKLNISHECLSLIY KFL+EM HLR
Subjt:  KNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR

XP_038893651.1 plant-specific TFIIB-related protein PTF2 [Benincasa hispida]3.5e-17382.59Show/hide
Query:  SCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEG
        SCKNC SRSLFRDDVSGNLICSSC IVQEFDNYEAQL  INGP GTFVRVGTS SG VLNYKDKKIFEAQKIIED+TFRLG + SKSNDVR+LVSTITEG
Subjt:  SCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEG

Query:  EYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ
        EYGLG WFPILVGACAYVSMRKDN PLPMSEVAS +ECD+HELGRMV+RVVDFLD KG EFPVF+IVGSLERA RNSPSFSRV+AD +ER+VKQ I +LQ
Subjt:  EYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ

Query:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGAKG
        CAMKWFLTTGRQPL MVAAVLVL+S+LN V+VSIDNVAM+VHA VST KKRYRELL+ALV+VGKKLPWGK      +VKNAPFVIQYMELKSMSNA  KG
Subjt:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGAKG

Query:  KNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR
        K+ ENVG+DLQ AV+ECLRKE EY SEVNNLEDDSQYFELQ  S  DESSCD  N+LNISHECLSLIY+KFL+EM HL+
Subjt:  KNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR

TrEMBL top hitse value%identityAlignment
A0A1S3B6X4 transcription factor IIIB 50 kDa subunit1.8e-17080.47Show/hide
Query:  SCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEG
        SCK+C SRS+FRDDVSGNLICSSC IVQEF+NYEAQL  INGPQGTFVRVGTS SG VLNYKDKK++EAQK+IED+TFRLG + SKSNDVR+LVSTITEG
Subjt:  SCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEG

Query:  EYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ
        EYGLG WFPILVGACAYVSMRKDN PL MSEVAS +ECD+HELGRMV+RVVDFLD +G EFPVF+IVGSLERA RNSPSFSR+EAD +ER+VKQ I +LQ
Subjt:  EYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ

Query:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGAKG
        CAMKWFLTTGRQPL MVAAVLVL+S+LN V+VS++NVAM+VHA VST KKRYRELL+ALVEVGKKLPWGK      +VKNAPFVIQYMELKSMSNA  KG
Subjt:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGAKG

Query:  KNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR
        K+ ENVGIDLQ AV+ECLRKE EY SEVNNLEDDSQYFELQ     DES+CD  N+LNISHECLSLIYNKFL+EM  LR
Subjt:  KNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR

A0A5A7UMA0 Transcription factor IIIB 50 kDa subunit1.8e-17080.47Show/hide
Query:  SCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEG
        SCK+C SRS+FRDDVSGNLICSSC IVQEF+NYEAQL  INGPQGTFVRVGTS SG VLNYKDKK++EAQK+IED+TFRLG + SKSNDVR+LVSTITEG
Subjt:  SCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEG

Query:  EYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ
        EYGLG WFPILVGACAYVSMRKDN PL MSEVAS +ECD+HELGRMV+RVVDFLD +G EFPVF+IVGSLERA RNSPSFSR+EAD +ER+VKQ I +LQ
Subjt:  EYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ

Query:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGAKG
        CAMKWFLTTGRQPL MVAAVLVL+S+LN V+VS++NVAM+VHA VST KKRYRELL+ALVEVGKKLPWGK      +VKNAPFVIQYMELKSMSNA  KG
Subjt:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGAKG

Query:  KNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR
        K+ ENVGIDLQ AV+ECLRKE EY SEVNNLEDDSQYFELQ     DES+CD  N+LNISHECLSLIYNKFL+EM  LR
Subjt:  KNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR

A0A6J1DRQ4 plant-specific TFIIB-related protein PTF22.1e-18785.64Show/hide
Query:  MRSCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTIT
        M SCKNC S+SLFRDDVSGNLICSSC IVQEFDNYEAQ+C INGPQGTFVRVGTS SGGVLNYKDKKIFEAQKIIEDVTFRLGL+PSKSNDVRLLVSTIT
Subjt:  MRSCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTIT

Query:  EGEYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILM
        +GEYGLG WFPILVGACAYVSMRKDNIPLPMSEVASTIECD+HELGRMVLRVVDFLD KG EFPVFNIVGSLER  RNSPSFSRVEADTMERM+KQ I +
Subjt:  EGEYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILM

Query:  LQCAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGA
        LQCAMKWFLTTGRQPL MVAAVLVL+SELN V+VSIDNVAM+VHANVSTSKKRY+ELLQALVEVGKKLPWGK      +VKNAPFVIQYMELKSM+NAGA
Subjt:  LQCAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGA

Query:  KGKNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQ----------------SKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR
        KGKN ENVGIDLQDAVNECLRK+FEYG EVNNLEDDSQYFELQ                S SR DES+ DYRNKL+ISHECLSLIYNKFLNEMDHLR
Subjt:  KGKNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQ----------------SKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR

A0A6J1GSR8 plant-specific TFIIB-related protein PTF25.3e-16780.74Show/hide
Query:  SCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEG
        SCKNC  RSLFRDDVSGNLICSSC IVQEFDNY+AQL  +NGPQGTFVRVGTS SG VLNYKDKKI+EAQ IIED+TFRLG + SKSNDVR+LVSTITEG
Subjt:  SCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEG

Query:  EYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ
        EYG G WF ILVGAC+YVSMRKDN PLPMSEVASTIECD+HELGRMVLRVVDFLD KG  FP F+IVGSLERA RNSPSFS+VEADT++ +VKQ I +LQ
Subjt:  EYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ

Query:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGAKG
        CAMKWFLTTGRQPL MVAAVLVL+S LN V VSID+VAM+VHA VST KKRYRELL ALVEVGKKLPWGK      +VKNAPFVIQYMELKSMSN   +G
Subjt:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGAKG

Query:  KNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR
        KN E+VGIDLQ AV+ECLRKE +Y SEVNNLEDDSQYFEL   S  DESSCD RNKLNISHECLSLIY KFL+EM HLR
Subjt:  KNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR

A0A6J1JZD6 plant-specific TFIIB-related protein PTF22.4e-16781Show/hide
Query:  SCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEG
        SCKNC  RSLFRDDVSGNLICSSC IVQEFDNY+AQL  +NGPQGTFVRVGTS SG VLNYKDKKI+EAQKIIED+TFRLG + SKSNDVR+LVSTITEG
Subjt:  SCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEG

Query:  EYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ
        EYG G WF ILVGAC+YVSMRKDN PLPMSEVASTIECD+HELGRMVLRVVDFLD KG  FP F+IVGSLERA RNSPSFS+VEADT++ +VKQ I +LQ
Subjt:  EYGLGGWFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ

Query:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGAKG
        CAMKWFLTTGRQPL MVAAVLVL+S LN V VSID+VAM+VHA VST KKRYRELL ALVEVGKKLPWGK      +VKNAPFVIQYMELKSMSN   +G
Subjt:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGK------VVKNAPFVIQYMELKSMSNAGAKG

Query:  KNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR
        KN E+VGIDLQ AV+ECLRKE +Y SEVNNLEDDSQYFEL   S  DESSCD RNKLNISHECLSLIY KFL+EM HLR
Subjt:  KNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDDSQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR

SwissProt top hitse value%identityAlignment
O81787 Plant-specific TFIIB-related protein PTF28.6e-7441.91Show/hide
Query:  CKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEGE
        CK C   +  RD+ +GN  C  C  ++E+DNYEAQL  I GPQGT++RVGT   G VL+YKDKKI+EA  +IE+ T RL L  +K+  ++ ++S +T+GE
Subjt:  CKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEGE

Query:  YGLGGWFPILVGACAYVSMRKDNI-PLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ
        +G G WFPIL+GAC Y  +R++    L M EVA  + CD+H+LG M+ RVVD LD   LE   F++VG   +   NSP  + V+ D  E+++KQ   ++ 
Subjt:  YGLGGWFPILVGACAYVSMRKDNI-PLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ

Query:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKK--LPWGK------VVKNAPFVIQYMELKSMSNAGA
        CA+KWFL+TGR+P+ +V AVL  + ++N V+V ID++A     +++T K RY+EL + LV+V ++  LPW K      V+K++  +   ME KSM     
Subjt:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKK--LPWGK------VVKNAPFVIQYMELKSMSNAGA

Query:  KGKNSENV---GIDLQDAVNECLRKEFEYGSEVNNLEDD-SQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKF
        +G   E V   G  ++D V +CL KE  Y  + +  +D  S+YF+++ + +L  S C+Y +  NIS   LS  YN+F
Subjt:  KGKNSENV---GIDLQDAVNECLRKEFEYGSEVNNLEDD-SQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKF

Q3UAW9 Transcription factor IIIB 50 kDa subunit4.8e-0822.26Show/hide
Query:  CKNCGSRSLFRDD--VSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITE
        C +CGS  L  D       L+CS C  V      E  L      +G F  V  S S G      +      + + D+  R+   P    D  +   +  +
Subjt:  CKNCGSRSLFRDD--VSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITE

Query:  GEYGLGG-------WFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLE------RAGRNSPSFSRVEAD
          Y L G          +LVG C  ++ R+ N PL M  + + +  D+       +++V  L   GL+ P   +   ++      +  + SPS      +
Subjt:  GEYGLGG-------WFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLE------RAGRNSPSFSRVEAD

Query:  TMERMVKQEILMLQCAMKWFLTTGRQPLSMVAAVLVL----MSELNNVEVSIDNVAMKVHANVS-TSKKRYRELLQALVEVGKKLPWGKVVK
          ++M+ + +L+++ A + +L TGR PL ++ A   L    +   + +  S+       + ++   +  R +ELL  L+++  +L W +V+K
Subjt:  TMERMVKQEILMLQCAMKWFLTTGRQPLSMVAAVLVL----MSELNNVEVSIDNVAMKVHANVS-TSKKRYRELLQALVEVGKKLPWGKVVK

Q4V8D6 Transcription factor IIIB 50 kDa subunit1.8e-0721.09Show/hide
Query:  CKNCGSRSLFRDD--VSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDV--TFRLGLTPSKSNDVRLLVSTI
        C +CGS  L  D       L+CS C  V      E  L      +G    V  S S G      +      + + D+    +L LT  ++        + 
Subjt:  CKNCGSRSLFRDD--VSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDV--TFRLGLTPSKSNDVRLLVSTI

Query:  TEGEYGLGG-------WFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLE------RAGRNSPSFSRVE
         +  Y L G          ++VG C  ++ R+ N PL M  + + +  D+       +++V  L   GL+ P   +   ++      +  + SPS     
Subjt:  TEGEYGLGG-------WFPILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLE------RAGRNSPSFSRVE

Query:  ADTMERMVKQEILMLQCAMKWFLTTGRQPLSMVAAVLVL----MSELNNVEVSIDNVAMKVHANVS-TSKKRYRELLQALVEVGKKLPWGKVVK
         +  ++M+ + +L+++ A + +L TGR PL ++ A   L    +   + +  S+       + ++   +  R +ELL  L+++  +L W +V++
Subjt:  ADTMERMVKQEILMLQCAMKWFLTTGRQPLSMVAAVLVL----MSELNNVEVSIDNVAMKVHANVS-TSKKRYRELLQALVEVGKKLPWGKVVK

Arabidopsis top hitse value%identityAlignment
AT4G35540.1 zinc ion binding;transcription regulators6.1e-7541.91Show/hide
Query:  CKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEGE
        CK C   +  RD+ +GN  C  C  ++E+DNYEAQL  I GPQGT++RVGT   G VL+YKDKKI+EA  +IE+ T RL L  +K+  ++ ++S +T+GE
Subjt:  CKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEGE

Query:  YGLGGWFPILVGACAYVSMRKDNI-PLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ
        +G G WFPIL+GAC Y  +R++    L M EVA  + CD+H+LG M+ RVVD LD   LE   F++VG   +   NSP  + V+ D  E+++KQ   ++ 
Subjt:  YGLGGWFPILVGACAYVSMRKDNI-PLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQ

Query:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKK--LPWGK------VVKNAPFVIQYMELKSMSNAGA
        CA+KWFL+TGR+P+ +V AVL  + ++N V+V ID++A     +++T K RY+EL + LV+V ++  LPW K      V+K++  +   ME KSM     
Subjt:  CAMKWFLTTGRQPLSMVAAVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKK--LPWGK------VVKNAPFVIQYMELKSMSNAGA

Query:  KGKNSENV---GIDLQDAVNECLRKEFEYGSEVNNLEDD-SQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKF
        +G   E V   G  ++D V +CL KE  Y  + +  +D  S+YF+++ + +L  S C+Y +  NIS   LS  YN+F
Subjt:  KGKNSENV---GIDLQDAVNECLRKEFEYGSEVNNLEDD-SQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTTCCTGCAAGAATTGCGGCAGCAGGTCCCTTTTCCGTGACGATGTCTCCGGCAACCTGATTTGCTCCTCCTGCGCTATTGTTCAGGAATTTGACAACTACGAGGC
CCAGCTTTGCGATATCAATGGTCCACAGGGCACATTCGTCCGCGTTGGAACCTCAGATTCAGGTGGCGTTCTGAATTACAAAGACAAGAAAATCTTTGAGGCTCAAAAAA
TTATTGAAGATGTTACGTTTAGATTAGGATTGACTCCTTCCAAATCCAACGACGTTAGGCTTTTAGTATCGACGATTACAGAAGGTGAGTATGGACTAGGTGGGTGGTTC
CCAATTCTCGTTGGTGCTTGTGCTTATGTTTCCATGCGTAAGGATAATATTCCATTACCAATGTCGGAGGTTGCATCGACCATTGAATGTGATATTCATGAACTTGGCAG
AATGGTTCTCAGAGTTGTCGATTTTTTGGATTTTAAAGGGCTTGAGTTCCCGGTGTTTAATATTGTGGGGTCATTAGAGCGGGCGGGAAGGAATTCACCGTCTTTCTCAA
GAGTAGAAGCAGATACAATGGAGAGAATGGTTAAGCAAGAAATCTTGATGTTACAGTGTGCTATGAAATGGTTCCTGACAACTGGGCGGCAACCACTATCTATGGTGGCT
GCTGTGTTGGTTCTAATGTCAGAATTGAATAACGTTGAAGTCAGTATTGACAATGTAGCAATGAAGGTTCATGCCAATGTTTCTACGAGTAAGAAGAGGTACAGGGAACT
TTTGCAGGCACTTGTGGAGGTTGGCAAAAAGTTGCCTTGGGGAAAGGTTGTGAAGAATGCACCTTTCGTGATCCAGTATATGGAGTTGAAATCAATGTCAAATGCTGGTG
CTAAGGGGAAGAATTCAGAGAATGTGGGGATTGATTTGCAGGACGCAGTAAACGAGTGTTTAAGAAAAGAGTTTGAGTATGGGAGTGAAGTTAATAATTTGGAAGATGAT
TCTCAGTACTTTGAGTTACAGAGCAAGAGTAGGCTTGATGAATCGAGTTGTGACTATAGGAACAAGCTCAACATTTCACATGAATGTTTATCCTTGATTTATAACAAGTT
TTTGAATGAAATGGATCATCTCAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGTTCCTGCAAGAATTGCGGCAGCAGGTCCCTTTTCCGTGACGATGTCTCCGGCAACCTGATTTGCTCCTCCTGCGCTATTGTTCAGGAATTTGACAACTACGAGGC
CCAGCTTTGCGATATCAATGGTCCACAGGGCACATTCGTCCGCGTTGGAACCTCAGATTCAGGTGGCGTTCTGAATTACAAAGACAAGAAAATCTTTGAGGCTCAAAAAA
TTATTGAAGATGTTACGTTTAGATTAGGATTGACTCCTTCCAAATCCAACGACGTTAGGCTTTTAGTATCGACGATTACAGAAGGTGAGTATGGACTAGGTGGGTGGTTC
CCAATTCTCGTTGGTGCTTGTGCTTATGTTTCCATGCGTAAGGATAATATTCCATTACCAATGTCGGAGGTTGCATCGACCATTGAATGTGATATTCATGAACTTGGCAG
AATGGTTCTCAGAGTTGTCGATTTTTTGGATTTTAAAGGGCTTGAGTTCCCGGTGTTTAATATTGTGGGGTCATTAGAGCGGGCGGGAAGGAATTCACCGTCTTTCTCAA
GAGTAGAAGCAGATACAATGGAGAGAATGGTTAAGCAAGAAATCTTGATGTTACAGTGTGCTATGAAATGGTTCCTGACAACTGGGCGGCAACCACTATCTATGGTGGCT
GCTGTGTTGGTTCTAATGTCAGAATTGAATAACGTTGAAGTCAGTATTGACAATGTAGCAATGAAGGTTCATGCCAATGTTTCTACGAGTAAGAAGAGGTACAGGGAACT
TTTGCAGGCACTTGTGGAGGTTGGCAAAAAGTTGCCTTGGGGAAAGGTTGTGAAGAATGCACCTTTCGTGATCCAGTATATGGAGTTGAAATCAATGTCAAATGCTGGTG
CTAAGGGGAAGAATTCAGAGAATGTGGGGATTGATTTGCAGGACGCAGTAAACGAGTGTTTAAGAAAAGAGTTTGAGTATGGGAGTGAAGTTAATAATTTGGAAGATGAT
TCTCAGTACTTTGAGTTACAGAGCAAGAGTAGGCTTGATGAATCGAGTTGTGACTATAGGAACAAGCTCAACATTTCACATGAATGTTTATCCTTGATTTATAACAAGTT
TTTGAATGAAATGGATCATCTCAGGTAA
Protein sequenceShow/hide protein sequence
MRSCKNCGSRSLFRDDVSGNLICSSCAIVQEFDNYEAQLCDINGPQGTFVRVGTSDSGGVLNYKDKKIFEAQKIIEDVTFRLGLTPSKSNDVRLLVSTITEGEYGLGGWF
PILVGACAYVSMRKDNIPLPMSEVASTIECDIHELGRMVLRVVDFLDFKGLEFPVFNIVGSLERAGRNSPSFSRVEADTMERMVKQEILMLQCAMKWFLTTGRQPLSMVA
AVLVLMSELNNVEVSIDNVAMKVHANVSTSKKRYRELLQALVEVGKKLPWGKVVKNAPFVIQYMELKSMSNAGAKGKNSENVGIDLQDAVNECLRKEFEYGSEVNNLEDD
SQYFELQSKSRLDESSCDYRNKLNISHECLSLIYNKFLNEMDHLR