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Moc03g27870 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g27870
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description(3S,6E)-nerolidol synthase 1-like
Genome locationchr3:20040029..20041231
RNA-Seq ExpressionMoc03g27870
SyntenyMoc03g27870
Gene Ontology termsGO:0010333 - terpene synthase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001906 - Terpene synthase, N-terminal domain
IPR008930 - Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR036965 - Terpene synthase, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ99412.1 (3S,6E)-nerolidol synthase 1-like [Cucumis melo var. makuwa]2.2e-2258.65Show/hide
Query:  AAEVRNLKRILRDQVGGCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDL
        A + R LK +LR ++G  WE L++IDA QRLGIDYHFQ EI+A+LQRQ    +A +F + E DLHK AL FRL RQ GY +  DVF+ FMDKKG FK+DL
Subjt:  AAEVRNLKRILRDQVGGCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDL

Query:  RAKI
        R  I
Subjt:  RAKI

XP_008441685.1 PREDICTED: (3S,6E)-nerolidol synthase 1-like [Cucumis melo]7.2e-2645.2Show/hide
Query:  AFCFAASFPTAKYIPPRNDHFLRQLKNPNV-KPLFGTQIVNSHDLALRSLPHK------HQNQFLDGLSC---AAEVRNLKRILRDQVGGCWESLDVIDA
        AF F  SF  +  IP  N+     + NP +  PL   QI++    +L S P K        +   +G+     A + R LK +LR ++G  WE L++IDA
Subjt:  AFCFAASFPTAKYIPPRNDHFLRQLKNPNV-KPLFGTQIVNSHDLALRSLPHK------HQNQFLDGLSC---AAEVRNLKRILRDQVGGCWESLDVIDA

Query:  LQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI
         QRLGIDYHFQ EI+A+LQRQ    +A +F + E DLHK AL FRL RQ GY +  DVF+ FMDKKG FK+DLR  I
Subjt:  LQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI

XP_022927129.1 uncharacterized protein LOC111434068 [Cucurbita moschata]1.3e-2243.89Show/hide
Query:  MAFCFAASFP---TAKYIPPRNDHFLRQLKNPNVKPLFGTQIVNSHDLALRSL---PHKHQNQFL----DGLSCAAEV--RNLKRILRDQVGGCWESLDV
        MAF   ASF     +  IP  ND       +P  K LF  Q +   D  L S    P++ +NQ      D +   A V  R LK +LR ++G  WE L++
Subjt:  MAFCFAASFP---TAKYIPPRNDHFLRQLKNPNVKPLFGTQIVNSHDLALRSL---PHKHQNQFL----DGLSCAAEV--RNLKRILRDQVGGCWESLDV

Query:  IDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI
        IDA QRLGIDYHFQ EI+AILQRQ    +A +  + + DLHK A  FRL RQHGY +  DVFE F+D +G FK++L+  I
Subjt:  IDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI

XP_023001644.1 uncharacterized protein LOC111495716 [Cucurbita maxima]5.1e-2445Show/hide
Query:  MAFCFAASFP---TAKYIPPRNDHFLRQLKNPNVKPLFGTQIVNSHDLALRSL---PHKHQNQFL----DGLSCAAEV--RNLKRILRDQVGGCWESLDV
        MAF   ASF     +  IP  ND       +P  K LF  Q +   D  L S    P++ +NQ      D +   A V  R LK +LR ++G  WE L++
Subjt:  MAFCFAASFP---TAKYIPPRNDHFLRQLKNPNVKPLFGTQIVNSHDLALRSL---PHKHQNQFL----DGLSCAAEV--RNLKRILRDQVGGCWESLDV

Query:  IDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI
        IDA QRLGIDYHFQ EI+AILQRQ    +A +  + + DLHK AL FRL RQHGY +  DVFE F+DK+G FK++L+  I
Subjt:  IDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI

XP_031737610.1 (3S,6E)-nerolidol synthase 1 [Cucumis sativus]5.7e-2342.37Show/hide
Query:  AFCFAASFPTAKYIPPRNDHFLRQLKNPNV-KPLFGTQIVNSHDLALRSLPHK------HQNQFLDGL---SCAAEVRNLKRILRDQVGGCWESLDVIDA
        AF F  S   +  IP  N+       NP +  PL   QI+     +L S P K        +   +G+     A + R LK +LR ++G  WE L++IDA
Subjt:  AFCFAASFPTAKYIPPRNDHFLRQLKNPNV-KPLFGTQIVNSHDLALRSLPHK------HQNQFLDGL---SCAAEVRNLKRILRDQVGGCWESLDVIDA

Query:  LQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI
         QRLGIDYHFQ EI+A+LQRQ    +A ++ + + DLHK AL FRL RQ GY +  DVF+ FMDKKG FK++LR  +
Subjt:  LQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI

TrEMBL top hitse value%identityAlignment
A0A0A0LUC8 Uncharacterized protein2.8e-2342.37Show/hide
Query:  AFCFAASFPTAKYIPPRNDHFLRQLKNPNV-KPLFGTQIVNSHDLALRSLPHK------HQNQFLDGL---SCAAEVRNLKRILRDQVGGCWESLDVIDA
        AF F  S   +  IP  N+       NP +  PL   QI+     +L S P K        +   +G+     A + R LK +LR ++G  WE L++IDA
Subjt:  AFCFAASFPTAKYIPPRNDHFLRQLKNPNV-KPLFGTQIVNSHDLALRSLPHK------HQNQFLDGL---SCAAEVRNLKRILRDQVGGCWESLDVIDA

Query:  LQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI
         QRLGIDYHFQ EI+A+LQRQ    +A ++ + + DLHK AL FRL RQ GY +  DVF+ FMDKKG FK++LR  +
Subjt:  LQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI

A0A1S3B3I5 (3S,6E)-nerolidol synthase 1-like3.5e-2645.2Show/hide
Query:  AFCFAASFPTAKYIPPRNDHFLRQLKNPNV-KPLFGTQIVNSHDLALRSLPHK------HQNQFLDGLSC---AAEVRNLKRILRDQVGGCWESLDVIDA
        AF F  SF  +  IP  N+     + NP +  PL   QI++    +L S P K        +   +G+     A + R LK +LR ++G  WE L++IDA
Subjt:  AFCFAASFPTAKYIPPRNDHFLRQLKNPNV-KPLFGTQIVNSHDLALRSLPHK------HQNQFLDGLSC---AAEVRNLKRILRDQVGGCWESLDVIDA

Query:  LQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI
         QRLGIDYHFQ EI+A+LQRQ    +A +F + E DLHK AL FRL RQ GY +  DVF+ FMDKKG FK+DLR  I
Subjt:  LQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI

A0A5D3BI68 (3S,6E)-nerolidol synthase 1-like1.0e-2258.65Show/hide
Query:  AAEVRNLKRILRDQVGGCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDL
        A + R LK +LR ++G  WE L++IDA QRLGIDYHFQ EI+A+LQRQ    +A +F + E DLHK AL FRL RQ GY +  DVF+ FMDKKG FK+DL
Subjt:  AAEVRNLKRILRDQVGGCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDL

Query:  RAKI
        R  I
Subjt:  RAKI

A0A6J1EH51 uncharacterized protein LOC1114340686.1e-2343.89Show/hide
Query:  MAFCFAASFP---TAKYIPPRNDHFLRQLKNPNVKPLFGTQIVNSHDLALRSL---PHKHQNQFL----DGLSCAAEV--RNLKRILRDQVGGCWESLDV
        MAF   ASF     +  IP  ND       +P  K LF  Q +   D  L S    P++ +NQ      D +   A V  R LK +LR ++G  WE L++
Subjt:  MAFCFAASFP---TAKYIPPRNDHFLRQLKNPNVKPLFGTQIVNSHDLALRSL---PHKHQNQFL----DGLSCAAEV--RNLKRILRDQVGGCWESLDV

Query:  IDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI
        IDA QRLGIDYHFQ EI+AILQRQ    +A +  + + DLHK A  FRL RQHGY +  DVFE F+D +G FK++L+  I
Subjt:  IDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI

A0A6J1KNB1 uncharacterized protein LOC1114957162.5e-2445Show/hide
Query:  MAFCFAASFP---TAKYIPPRNDHFLRQLKNPNVKPLFGTQIVNSHDLALRSL---PHKHQNQFL----DGLSCAAEV--RNLKRILRDQVGGCWESLDV
        MAF   ASF     +  IP  ND       +P  K LF  Q +   D  L S    P++ +NQ      D +   A V  R LK +LR ++G  WE L++
Subjt:  MAFCFAASFP---TAKYIPPRNDHFLRQLKNPNVKPLFGTQIVNSHDLALRSL---PHKHQNQFL----DGLSCAAEV--RNLKRILRDQVGGCWESLDV

Query:  IDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI
        IDA QRLGIDYHFQ EI+AILQRQ    +A +  + + DLHK AL FRL RQHGY +  DVFE F+DK+G FK++L+  I
Subjt:  IDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI

SwissProt top hitse value%identityAlignment
B6SCF4 Myrcene synthase, chloroplastic5.9e-1542.31Show/hide
Query:  GLSCAAEVRNLK---RILRDQVGGCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKK
        G S ++ +  LK   +++ D    C   LD+ID LQRLGI YHF+ EI+ IL+R+   I+     +   +L+  AL+FRLLRQHGY +  +VF  F D+ 
Subjt:  GLSCAAEVRNLK---RILRDQVGGCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKK

Query:  GNFK
        G FK
Subjt:  GNFK

B9RXW4 Probable terpene synthase 133.4e-1852.73Show/hide
Query:  RNLKRILRDQVGGCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI
        R  K ILR +  G  E L +IDA+QRLGID+HFQ EID ILQR QY I +  + D   DLH +ALRFRLLRQ GY +   VF+ F DK+GNF +    K+
Subjt:  RNLKRILRDQVGGCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI

Query:  SKGWRAYMKL
        S   R  M+L
Subjt:  SKGWRAYMKL

P0CV94 (3S,6E)-nerolidol synthase 11.8e-1955.79Show/hide
Query:  LKRILRDQVG-GCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDL
        LK +LR+       E L++IDA+QRLGIDY+FQ EID IL +Q   +SA        DLH+VALRFRLLRQHGY++P DVF  F D KG FK+ L
Subjt:  LKRILRDQVG-GCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDL

P0CV95 (3S,6E)-nerolidol synthase 2, chloroplastic/mitochondrial2.3e-1960.49Show/hide
Query:  ESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDL
        E L++IDA+QRLGID+HFQ EID IL +Q   +SA        DLH+VALRFRLLRQHGY++P DVF  F D KG FK+ L
Subjt:  ESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDL

P0CV96 (3S,6E)-nerolidol synthase 1, chloroplastic8.8e-1960.49Show/hide
Query:  ESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDL
        E L++IDA+QRLGIDYHFQ EID IL +Q   +SA        DL++VALRFRLLRQHGY++P DVF  F D KG FK+ L
Subjt:  ESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDL

Arabidopsis top hitse value%identityAlignment
AT1G61680.1 terpene synthase 142.0e-1343.62Show/hide
Query:  VRNLKRILRDQVGGCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFK
        ++ +K IL   V    E+L++ID +Q LGID HF+ EI+  L    Y       G    DLH++ALRFRLLRQ G+Y+   +F+  +DKKG FK
Subjt:  VRNLKRILRDQVGGCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFK

AT2G24210.1 terpene synthase 106.1e-1543.01Show/hide
Query:  LKRILRDQVGGCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKD
        ++++L D+     + L+ ID LQ+LG+ YHF+ EID IL     +    R    E DLH  AL FRL RQHG+ +  DVF+VFM+  G F +D
Subjt:  LKRILRDQVGGCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKD

AT3G25810.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein3.7e-1245.78Show/hide
Query:  ESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFG-DGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDK--KGNFKKD
        E L++ID LQ+LG+ YHF+ EI+ IL           +  D E DLH  AL FRLLRQHG+ +  D+F+V +DK     FK D
Subjt:  ESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFG-DGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDK--KGNFKKD

AT3G25820.1 terpene synthase-like sequence-1,8-cineole5.3e-1138.2Show/hide
Query:  RNLKRILRDQVGGCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFG-DGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDK
        + +K +L D+     E L++ID LQ+LG+ YHF+ EI+  L      +    +  D E DLH  +L FRLLRQHG+ +  ++F+V +D+
Subjt:  RNLKRILRDQVGGCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFG-DGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDK

AT4G16730.1 terpene synthase 025.1e-1442.27Show/hide
Query:  DQVGGCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEI-----DLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI
        +++ G  E L++ID+LQRLGI YH++HEI  IL++            GEI     DLH  +L F LLRQHG+ +  D F+VF+ + G F+K L + I
Subjt:  DQVGGCWESLDVIDALQRLGIDYHFQHEIDAILQRQQYAISAPRFGDGEI-----DLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTCTGTTTTGCTGCTTCCTTCCCGACTGCAAAGTACATTCCACCAAGGAATGACCATTTCTTACGACAGTTGAAGAATCCTAATGTAAAACCTTTATTTGGGAC
GCAAATCGTTAATTCCCATGATCTTGCCTTGCGCTCTCTCCCCCATAAACACCAAAATCAGTTTCTGGATGGTTTGAGTTGTGCAGCTGAGGTGAGGAATTTGAAGCGTA
TACTAAGAGACCAAGTAGGAGGTTGTTGGGAGAGTTTGGATGTGATTGATGCACTACAACGCTTAGGAATTGACTATCACTTCCAACACGAGATTGATGCCATTCTACAG
AGGCAACAATATGCAATCTCTGCTCCTCGTTTTGGTGATGGCGAGATTGATCTTCATAAGGTTGCCCTTCGGTTTCGACTTCTGAGACAGCATGGTTACTACATGCCTCT
AGATGTGTTTGAAGTTTTCATGGACAAGAAGGGAAACTTCAAGAAAGATCTGAGAGCGAAGATATCAAAGGGCTGGCGAGCTTATATGAAGCTCCAAAGCTTTGTATGGA
TGGAGAAGAGGCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTCTGTTTTGCTGCTTCCTTCCCGACTGCAAAGTACATTCCACCAAGGAATGACCATTTCTTACGACAGTTGAAGAATCCTAATGTAAAACCTTTATTTGGGAC
GCAAATCGTTAATTCCCATGATCTTGCCTTGCGCTCTCTCCCCCATAAACACCAAAATCAGTTTCTGGATGGTTTGAGTTGTGCAGCTGAGGTGAGGAATTTGAAGCGTA
TACTAAGAGACCAAGTAGGAGGTTGTTGGGAGAGTTTGGATGTGATTGATGCACTACAACGCTTAGGAATTGACTATCACTTCCAACACGAGATTGATGCCATTCTACAG
AGGCAACAATATGCAATCTCTGCTCCTCGTTTTGGTGATGGCGAGATTGATCTTCATAAGGTTGCCCTTCGGTTTCGACTTCTGAGACAGCATGGTTACTACATGCCTCT
AGATGTGTTTGAAGTTTTCATGGACAAGAAGGGAAACTTCAAGAAAGATCTGAGAGCGAAGATATCAAAGGGCTGGCGAGCTTATATGAAGCTCCAAAGCTTTGTATGGA
TGGAGAAGAGGCCATAG
Protein sequenceShow/hide protein sequence
MAFCFAASFPTAKYIPPRNDHFLRQLKNPNVKPLFGTQIVNSHDLALRSLPHKHQNQFLDGLSCAAEVRNLKRILRDQVGGCWESLDVIDALQRLGIDYHFQHEIDAILQ
RQQYAISAPRFGDGEIDLHKVALRFRLLRQHGYYMPLDVFEVFMDKKGNFKKDLRAKISKGWRAYMKLQSFVWMEKRP