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Moc03g28540 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g28540
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionglycine-rich protein DOT1-like
Genome locationchr3:20479232..20479795
RNA-Seq ExpressionMoc03g28540
SyntenyMoc03g28540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584096.1 hypothetical protein SDJN03_20028, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1042.11Show/hide
Query:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-------EAVGGGTGGGTGSIGIGIGSNVSAGTGVRVG---PGGLGFDPNFGVG
        FRFLC++  +LVLGR   GY GG++GWGFNN++  C YWRGCGSF         A GGG GGG G  G G+GS    G G   G    GG G     G G
Subjt:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-------EAVGGGTGGGTGSIGIGIGSNVSAGTGVRVG---PGGLGFDPNFGVG

Query:  IGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHG
         G     +G  +G G GGG    G G       G + + +G G G   G  G
Subjt:  IGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHG

XP_022139970.1 glycine-rich cell wall structural protein 1-like [Momordica charantia]5.1e-1647.2Show/hide
Query:  MGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGG-----TGSIGIGIGSNV--------SAGTGVRVGPGGL
        MGEF  FRF CV   ILVL R  LGYGGGESGWGFNN+QY CPYWRGCGSF    GGG GGG      G +G G G             G+G   G GG 
Subjt:  MGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGG-----TGSIGIGIGSNV--------SAGTGVRVGPGGL

Query:  GFDPNFGVGIGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHG
        G    +G G G GA   G     G GGG    G GY      G      G GGG   G  G
Subjt:  GFDPNFGVGIGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHG

XP_022140140.1 glycine-rich protein DOT1-like [Momordica charantia]2.8e-99100Show/hide
Query:  MGNINFKPLQPKFVSQRIMGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGGTGSIGIGIGSNVSAGTGVRV
        MGNINFKPLQPKFVSQRIMGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGGTGSIGIGIGSNVSAGTGVRV
Subjt:  MGNINFKPLQPKFVSQRIMGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGGTGSIGIGIGSNVSAGTGVRV

Query:  GPGGLGFDPNFGVGIGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHGADECIHHLAKTTTKITSNTQP
        GPGGLGFDPNFGVGIGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHGADECIHHLAKTTTKITSNTQP
Subjt:  GPGGLGFDPNFGVGIGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHGADECIHHLAKTTTKITSNTQP

XP_022923768.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]2.6e-1243.14Show/hide
Query:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-------EAVGGGTGGGTGSIGIGIGSNVSAGTGVRVG---PGGLGFDPNFGVG
        FRFLC++  +LVLGR   GY GG++GWGFNN++  C YWRGCGSF         A GGG GGG G  G G+GS    G G   G    GG G     G G
Subjt:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-------EAVGGGTGGGTGSIGIGIGSNVSAGTGVRVG---PGGLGFDPNFGVG

Query:  IGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHGA
         G     +G   G G GG  +R G  Y          H  G GGG   G  GA
Subjt:  IGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHGA

XP_023520206.1 glycine-rich cell wall structural protein 1-like [Cucurbita pepo subsp. pepo]1.0e-1145.1Show/hide
Query:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI------EAVGGGTGGGTG---SIGIGIGSNVSAGTGVRVGPGGLGFDPNFGVGI
        FRFLC+V  +LVLGR   GY GG++GWGFNN++  C YWRGCGSF        + GGG G G G     G G+GS+  +G G   G GG G +   G G 
Subjt:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI------EAVGGGTGGGTG---SIGIGIGSNVSAGTGVRVGPGGLGFDPNFGVGI

Query:  GSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGED-AHSEGNGGGQATGNHGA
        G GA   G   G G GGG    G G  +    GE   H  G GGG   G  GA
Subjt:  GSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGED-AHSEGNGGGQATGNHGA

TrEMBL top hitse value%identityAlignment
A0A5D3BJP2 Uncharacterized protein1.4e-0637.18Show/hide
Query:  ASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-----------EAVGGGTGGGTGSIGIGIGSNVSAGTGVRVGPGGLGFDPNF
        +SF F C +  +LVL +   GY     GWGF+N+   C YWRGCG+F               GGG+GGG G+ G G+G     G G   G GG G     
Subjt:  ASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-----------EAVGGGTGGGTGSIGIGIGSNVSAGTGVRVGPGGLGFDPNF

Query:  GVGIGSGARAA-GVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHG
        G G G G+R   G  +G G GGG +  G         G      G GGG  +GN G
Subjt:  GVGIGSGARAA-GVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHG

A0A6J1CDR6 glycine-rich cell wall structural protein 1-like2.5e-1647.2Show/hide
Query:  MGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGG-----TGSIGIGIGSNV--------SAGTGVRVGPGGL
        MGEF  FRF CV   ILVL R  LGYGGGESGWGFNN+QY CPYWRGCGSF    GGG GGG      G +G G G             G+G   G GG 
Subjt:  MGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGG-----TGSIGIGIGSNV--------SAGTGVRVGPGGL

Query:  GFDPNFGVGIGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHG
        G    +G G G GA   G     G GGG    G GY      G      G GGG   G  G
Subjt:  GFDPNFGVGIGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHG

A0A6J1CE99 glycine-rich protein DOT1-like1.4e-99100Show/hide
Query:  MGNINFKPLQPKFVSQRIMGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGGTGSIGIGIGSNVSAGTGVRV
        MGNINFKPLQPKFVSQRIMGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGGTGSIGIGIGSNVSAGTGVRV
Subjt:  MGNINFKPLQPKFVSQRIMGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGGTGSIGIGIGSNVSAGTGVRV

Query:  GPGGLGFDPNFGVGIGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHGADECIHHLAKTTTKITSNTQP
        GPGGLGFDPNFGVGIGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHGADECIHHLAKTTTKITSNTQP
Subjt:  GPGGLGFDPNFGVGIGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHGADECIHHLAKTTTKITSNTQP

A0A6J1EAJ0 glycine-rich cell wall structural protein 2-like1.3e-1243.14Show/hide
Query:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-------EAVGGGTGGGTGSIGIGIGSNVSAGTGVRVG---PGGLGFDPNFGVG
        FRFLC++  +LVLGR   GY GG++GWGFNN++  C YWRGCGSF         A GGG GGG G  G G+GS    G G   G    GG G     G G
Subjt:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-------EAVGGGTGGGTGSIGIGIGSNVSAGTGVRVG---PGGLGFDPNFGVG

Query:  IGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHGA
         G     +G   G G GG  +R G  Y          H  G GGG   G  GA
Subjt:  IGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHGA

A0A6J1KJ79 glycine-rich cell wall structural protein 1-like2.3e-0940Show/hide
Query:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-------EAVGGGTGGGTG--------------SIGIGIGSNVSAGTGVRVGPG
        F FLC++  +LVLGR   G+ GG+ GWGFNN +  C YWRGCGSF         A GGG GGG G                G G+GS+  +G G   G G
Subjt:  FRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFI-------EAVGGGTGGGTG--------------SIGIGIGSNVSAGTGVRVGPG

Query:  GLGFDPNFGVGIGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHGAD
        G G +   G G G GA   G + G G GGG    G GY      G      G GGG   G  G +
Subjt:  GLGFDPNFGVGIGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHGAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAACATCAACTTCAAGCCACTGCAACCCAAGTTTGTTAGCCAACGTATAATGGGTGAGTTTGCAAGTTTCAGATTTTTGTGTGTCGTGATCGCGATTCTTGTTTT
AGGCAGAGCTTGTTTGGGGTATGGAGGAGGTGAGAGCGGGTGGGGATTTAACAATCAACAATATCATTGCCCATATTGGCGGGGATGCGGAAGCTTCATTGAGGCCGTTG
GAGGAGGGACTGGGGGAGGTACTGGTAGTATTGGTATTGGAATTGGCTCCAACGTCAGCGCCGGCACCGGCGTCCGTGTTGGGCCTGGTGGACTAGGATTTGACCCCAAC
TTCGGCGTTGGCATCGGCTCCGGTGCTAGGGCTGCTGGTGTCAGCGCCGGTATTGGGATGGGTGGAGGAGAAATTCGCAATGGCCGCGGATACTACGACGACGACAACGA
AGGGGAGGACGCGCACAGTGAGGGGAATGGAGGAGGACAAGCCACGGGAAACCATGGAGCTGATGAATGCATTCATCATCTAGCTAAAACTACAACTAAAATCACTTCAA
ATACTCAACCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAACATCAACTTCAAGCCACTGCAACCCAAGTTTGTTAGCCAACGTATAATGGGTGAGTTTGCAAGTTTCAGATTTTTGTGTGTCGTGATCGCGATTCTTGTTTT
AGGCAGAGCTTGTTTGGGGTATGGAGGAGGTGAGAGCGGGTGGGGATTTAACAATCAACAATATCATTGCCCATATTGGCGGGGATGCGGAAGCTTCATTGAGGCCGTTG
GAGGAGGGACTGGGGGAGGTACTGGTAGTATTGGTATTGGAATTGGCTCCAACGTCAGCGCCGGCACCGGCGTCCGTGTTGGGCCTGGTGGACTAGGATTTGACCCCAAC
TTCGGCGTTGGCATCGGCTCCGGTGCTAGGGCTGCTGGTGTCAGCGCCGGTATTGGGATGGGTGGAGGAGAAATTCGCAATGGCCGCGGATACTACGACGACGACAACGA
AGGGGAGGACGCGCACAGTGAGGGGAATGGAGGAGGACAAGCCACGGGAAACCATGGAGCTGATGAATGCATTCATCATCTAGCTAAAACTACAACTAAAATCACTTCAA
ATACTCAACCTTAG
Protein sequenceShow/hide protein sequence
MGNINFKPLQPKFVSQRIMGEFASFRFLCVVIAILVLGRACLGYGGGESGWGFNNQQYHCPYWRGCGSFIEAVGGGTGGGTGSIGIGIGSNVSAGTGVRVGPGGLGFDPN
FGVGIGSGARAAGVSAGIGMGGGEIRNGRGYYDDDNEGEDAHSEGNGGGQATGNHGADECIHHLAKTTTKITSNTQP