; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g28710 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g28710
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr3:20575707..20579594
RNA-Seq ExpressionMoc03g28710
SyntenyMoc03g28710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8530341.1 hypothetical protein F0562_005050 [Nyssa sinensis]6.6e-0926.67Show/hide
Query:  LTFLQSHL---ASMKPTSDSGASSSSHVAGASSHICFSRDMFTSLLPTSGISVTLPNNSRIHAKSS----------LKTI-----GKAELWNGLYLLRAD
        ++ L +HL   AS     +S A+++++ AGA+ HIC + ++FT++      +VTLPN++RI    S          LK +      K  L + + L +  
Subjt:  LTFLQSHL---ASMKPTSDSGASSSSHVAGASSHICFSRDMFTSLLPTSGISVTLPNNSRIHAKSS----------LKTI-----GKAELWNGLYLLRAD

Query:  ASRLGHPSDKHML-------------ALKDILPIDASQDPFPHLVLPKSFDFSGQGPITSVGSSSGASPVIP----DVSPDIGVSDGGTCVLSPNGCAPI
           +    D  ++              L+D+  +D +      +    S  F+       V S +    V+P    DV P + VS   +           
Subjt:  ASRLGHPSDKHML-------------ALKDILPIDASQDPFPHLVLPKSFDFSGQGPITSVGSSSGASPVIP----DVSPDIGVSDGGTCVLSPNGCAPI

Query:  EASTVDVVNTGESSIVATDLPSIPGANDPVSSSLVVSRRSSRSIKPPTYLKDYHCSLLNAEPIPQSSTSHPLHHFISYISLSPTY
        E   +D V          D+   P  + P +S+++ +R+S+R IKPP+YL DYHCSL++ + +P S++S+PL  F+SY SLS ++
Subjt:  EASTVDVVNTGESSIVATDLPSIPGANDPVSSSLVVSRRSSRSIKPPTYLKDYHCSLLNAEPIPQSSTSHPLHHFISYISLSPTY

XP_022141216.1 uncharacterized protein LOC111011669 [Momordica charantia]4.0e-1498Show/hide
Query:  SSVASSSNADSLSNYNADQFQGLLTFLQSHLASMKPTSDSGASSSSHVAG
        SSVASSSNADSLSNY ADQFQGLLTFLQSHLASMKPTSDSGASSSSHVAG
Subjt:  SSVASSSNADSLSNYNADQFQGLLTFLQSHLASMKPTSDSGASSSSHVAG

XP_022143573.1 uncharacterized protein LOC111013441 [Momordica charantia]5.7e-1333.2Show/hide
Query:  ISVTLPNNS-RIHAKSSLKTIGKAELWNGLYLLRADA-----------------------SRLGHPSDKHMLALKDILPI--------------------
        +SV   N++  I  KS  KTI K  L +GLYLL   +                       +RLGHPS   + ALK +LP+                    
Subjt:  ISVTLPNNS-RIHAKSSLKTIGKAELWNGLYLLRADA-----------------------SRLGHPSDKHMLALKDILPI--------------------

Query:  ---DASQDPFPHLVLPKSFDFSGQGPITSVGSSSGASPVIPDVSPDIGVSDGGTCVLSPNGCAPIEASTVDVVNTGESSIVATDLP-SIPGANDPVS---
           D S +PFP LVLP   DF    P   +   + A   IP V P   +S   T  + P  CAP    + D   +  + +V+  +P + P  + P+S   
Subjt:  ---DASQDPFPHLVLPKSFDFSGQGPITSVGSSSGASPVIPDVSPDIGVSDGGTCVLSPNGCAPIEASTVDVVNTGESSIVATDLP-SIPGANDPVS---

Query:  SSLV----VSRRSSRSIKPPTYLKDYHCSLL-NAEPIPQSSTSHPLHHFISYISLSPTY
        SS+V    V RRS+R  K P+YL+D+HCSLL N+ P P +ST HPL  ++SY  LS  +
Subjt:  SSLV----VSRRSSRSIKPPTYLKDYHCSLL-NAEPIPQSSTSHPLHHFISYISLSPTY

XP_022152756.1 uncharacterized protein LOC111020399 [Momordica charantia]6.3e-1227.85Show/hide
Query:  QGLLTFLQSHLASMKPTSDSGASSSSHVAGASSHICFSRDMFTSLLPT-SGISVTLPNNSRI-HAKSSLKTIGKAELWNGLYLLRADA------------
        Q L T L +  +S    S S ++SSS+   A  H      ++ S L   S +SV   +N  I   KSS K IGKAE W+GLYLL  +             
Subjt:  QGLLTFLQSHLASMKPTSDSGASSSSHVAGASSHICFSRDMFTSLLPT-SGISVTLPNNSRI-HAKSSLKTIGKAELWNGLYLLRADA------------

Query:  -----SRLGHPSDKHMLALKDILPIDA---SQDPFPHLVLP-----------------KSFDF---SGQGPITSVGSS-------------------SGA
             +RLGHPS KH+ ALK++L ID+       FP  + P                  SFD       GP +S+  +                   SG 
Subjt:  -----SRLGHPSDKHMLALKDILPIDA---SQDPFPHLVLP-----------------KSFDF---SGQGPITSVGSS-------------------SGA

Query:  SPVIPDVSPDIGVSD------------GGTCVLSPNGCAPIEASTVDVVNTGESSIVATDLPSIPGAND----------PVSSSLVVSRRSSRSIKPPTY
        S   P VS  IG++D            G   V+  +        T  VV+  ++  VA D  +    +D           V +S+V  RRSSR  + P+Y
Subjt:  SPVIPDVSPDIGVSD------------GGTCVLSPNGCAPIEASTVDVVNTGESSIVATDLPSIPGAND----------PVSSSLVVSRRSSRSIKPPTY

Query:  LKDYHCSLLNAEPIPQSSTSHPLHHFISYISLSPTYSKILELFGGRNWYTNSDGHHEINVIDEAGSSS-----MQVYVNEDQNQNQLTVVNEKTSKHKID
        L+DYHC L+ +   P SS  + LH  + Y  L   Y         R +  N    +E     +A S S     M+  +   ++    +VV   + +H I 
Subjt:  LKDYHCSLLNAEPIPQSSTSHPLHHFISYISLSPTYSKILELFGGRNWYTNSDGHHEINVIDEAGSSS-----MQVYVNEDQNQNQLTVVNEKTSKHKID

Query:  LRWA---KSKSHG
         +W    K KS G
Subjt:  LRWA---KSKSHG

XP_022154919.1 uncharacterized protein LOC111022065 [Momordica charantia]2.5e-0832.73Show/hide
Query:  DPFPHLVLPKSFDF---SGQGPIT--SVGSSSGASPVIPDVSPDIGVSDGGTCVLS----PNGCAPIEASTVDVV-NTGESSIV---ATDLPSIPGA---
        DPFP +V+PKS+D    S   P    +  + S  SP   D+SP + + DG   +++     NG   + A+  +++ N  E+S++    TD+ ++  A   
Subjt:  DPFPHLVLPKSFDF---SGQGPIT--SVGSSSGASPVIPDVSPDIGVSDGGTCVLS----PNGCAPIEASTVDVV-NTGESSIV---ATDLPSIPGA---

Query:  --NDPVSSSLVVSRRSSRSIKPPTYLKDYHCSLLNAEPIPQSSTSHPLHHFISYISLSPTYSKIL
          +DP  S  V  RRSSR  + P+YL+DYHC L+ A     SS  +PL  ++ Y +LS +Y + +
Subjt:  --NDPVSSSLVVSRRSSRSIKPPTYLKDYHCSLLNAEPIPQSSTSHPLHHFISYISLSPTYSKIL

TrEMBL top hitse value%identityAlignment
A0A5J5AMM8 Uncharacterized protein3.2e-0926.67Show/hide
Query:  LTFLQSHL---ASMKPTSDSGASSSSHVAGASSHICFSRDMFTSLLPTSGISVTLPNNSRIHAKSS----------LKTI-----GKAELWNGLYLLRAD
        ++ L +HL   AS     +S A+++++ AGA+ HIC + ++FT++      +VTLPN++RI    S          LK +      K  L + + L +  
Subjt:  LTFLQSHL---ASMKPTSDSGASSSSHVAGASSHICFSRDMFTSLLPTSGISVTLPNNSRIHAKSS----------LKTI-----GKAELWNGLYLLRAD

Query:  ASRLGHPSDKHML-------------ALKDILPIDASQDPFPHLVLPKSFDFSGQGPITSVGSSSGASPVIP----DVSPDIGVSDGGTCVLSPNGCAPI
           +    D  ++              L+D+  +D +      +    S  F+       V S +    V+P    DV P + VS   +           
Subjt:  ASRLGHPSDKHML-------------ALKDILPIDASQDPFPHLVLPKSFDFSGQGPITSVGSSSGASPVIP----DVSPDIGVSDGGTCVLSPNGCAPI

Query:  EASTVDVVNTGESSIVATDLPSIPGANDPVSSSLVVSRRSSRSIKPPTYLKDYHCSLLNAEPIPQSSTSHPLHHFISYISLSPTY
        E   +D V          D+   P  + P +S+++ +R+S+R IKPP+YL DYHCSL++ + +P S++S+PL  F+SY SLS ++
Subjt:  EASTVDVVNTGESSIVATDLPSIPGANDPVSSSLVVSRRSSRSIKPPTYLKDYHCSLLNAEPIPQSSTSHPLHHFISYISLSPTY

A0A6J1CIG1 uncharacterized protein LOC1110116691.9e-1498Show/hide
Query:  SSVASSSNADSLSNYNADQFQGLLTFLQSHLASMKPTSDSGASSSSHVAG
        SSVASSSNADSLSNY ADQFQGLLTFLQSHLASMKPTSDSGASSSSHVAG
Subjt:  SSVASSSNADSLSNYNADQFQGLLTFLQSHLASMKPTSDSGASSSSHVAG

A0A6J1CR17 uncharacterized protein LOC1110134412.8e-1333.2Show/hide
Query:  ISVTLPNNS-RIHAKSSLKTIGKAELWNGLYLLRADA-----------------------SRLGHPSDKHMLALKDILPI--------------------
        +SV   N++  I  KS  KTI K  L +GLYLL   +                       +RLGHPS   + ALK +LP+                    
Subjt:  ISVTLPNNS-RIHAKSSLKTIGKAELWNGLYLLRADA-----------------------SRLGHPSDKHMLALKDILPI--------------------

Query:  ---DASQDPFPHLVLPKSFDFSGQGPITSVGSSSGASPVIPDVSPDIGVSDGGTCVLSPNGCAPIEASTVDVVNTGESSIVATDLP-SIPGANDPVS---
           D S +PFP LVLP   DF    P   +   + A   IP V P   +S   T  + P  CAP    + D   +  + +V+  +P + P  + P+S   
Subjt:  ---DASQDPFPHLVLPKSFDFSGQGPITSVGSSSGASPVIPDVSPDIGVSDGGTCVLSPNGCAPIEASTVDVVNTGESSIVATDLP-SIPGANDPVS---

Query:  SSLV----VSRRSSRSIKPPTYLKDYHCSLL-NAEPIPQSSTSHPLHHFISYISLSPTY
        SS+V    V RRS+R  K P+YL+D+HCSLL N+ P P +ST HPL  ++SY  LS  +
Subjt:  SSLV----VSRRSSRSIKPPTYLKDYHCSLL-NAEPIPQSSTSHPLHHFISYISLSPTY

A0A6J1DIP8 uncharacterized protein LOC1110203993.1e-1227.85Show/hide
Query:  QGLLTFLQSHLASMKPTSDSGASSSSHVAGASSHICFSRDMFTSLLPT-SGISVTLPNNSRI-HAKSSLKTIGKAELWNGLYLLRADA------------
        Q L T L +  +S    S S ++SSS+   A  H      ++ S L   S +SV   +N  I   KSS K IGKAE W+GLYLL  +             
Subjt:  QGLLTFLQSHLASMKPTSDSGASSSSHVAGASSHICFSRDMFTSLLPT-SGISVTLPNNSRI-HAKSSLKTIGKAELWNGLYLLRADA------------

Query:  -----SRLGHPSDKHMLALKDILPIDA---SQDPFPHLVLP-----------------KSFDF---SGQGPITSVGSS-------------------SGA
             +RLGHPS KH+ ALK++L ID+       FP  + P                  SFD       GP +S+  +                   SG 
Subjt:  -----SRLGHPSDKHMLALKDILPIDA---SQDPFPHLVLP-----------------KSFDF---SGQGPITSVGSS-------------------SGA

Query:  SPVIPDVSPDIGVSD------------GGTCVLSPNGCAPIEASTVDVVNTGESSIVATDLPSIPGAND----------PVSSSLVVSRRSSRSIKPPTY
        S   P VS  IG++D            G   V+  +        T  VV+  ++  VA D  +    +D           V +S+V  RRSSR  + P+Y
Subjt:  SPVIPDVSPDIGVSD------------GGTCVLSPNGCAPIEASTVDVVNTGESSIVATDLPSIPGAND----------PVSSSLVVSRRSSRSIKPPTY

Query:  LKDYHCSLLNAEPIPQSSTSHPLHHFISYISLSPTYSKILELFGGRNWYTNSDGHHEINVIDEAGSSS-----MQVYVNEDQNQNQLTVVNEKTSKHKID
        L+DYHC L+ +   P SS  + LH  + Y  L   Y         R +  N    +E     +A S S     M+  +   ++    +VV   + +H I 
Subjt:  LKDYHCSLLNAEPIPQSSTSHPLHHFISYISLSPTYSKILELFGGRNWYTNSDGHHEINVIDEAGSSS-----MQVYVNEDQNQNQLTVVNEKTSKHKID

Query:  LRWA---KSKSHG
         +W    K KS G
Subjt:  LRWA---KSKSHG

A0A6J1DNP7 uncharacterized protein LOC1110220651.2e-0832.73Show/hide
Query:  DPFPHLVLPKSFDF---SGQGPIT--SVGSSSGASPVIPDVSPDIGVSDGGTCVLS----PNGCAPIEASTVDVV-NTGESSIV---ATDLPSIPGA---
        DPFP +V+PKS+D    S   P    +  + S  SP   D+SP + + DG   +++     NG   + A+  +++ N  E+S++    TD+ ++  A   
Subjt:  DPFPHLVLPKSFDF---SGQGPIT--SVGSSSGASPVIPDVSPDIGVSDGGTCVLS----PNGCAPIEASTVDVV-NTGESSIV---ATDLPSIPGA---

Query:  --NDPVSSSLVVSRRSSRSIKPPTYLKDYHCSLLNAEPIPQSSTSHPLHHFISYISLSPTYSKIL
          +DP  S  V  RRSSR  + P+YL+DYHC L+ A     SS  +PL  ++ Y +LS +Y + +
Subjt:  --NDPVSSSLVVSRRSSRSIKPPTYLKDYHCSLLNAEPIPQSSTSHPLHHFISYISLSPTYSKIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATCTTCAGTTGCTTCTTCGTCCAATGCTGATTCGTTGAGTAATTACAATGCTGATCAGTTCCAAGGGCTTTTGACTTTTCTGCAGTCTCATTTGGCATCCATGAA
GCCAACATCCGATTCTGGTGCCTCTTCTTCCAGTCATGTGGCAGGGGCATCATCGCATATCTGTTTTTCTCGTGATATGTTTACTTCTCTGCTGCCTACATCTGGTATTT
CAGTCACTTTGCCAAATAATTCTCGGATTCATGCCAAGTCCTCTTTGAAGACGATTGGCAAGGCTGAGCTCTGGAATGGTTTATATCTTCTGCGTGCAGATGCTTCTCGA
CTTGGCCACCCTTCTGATAAACACATGTTAGCATTAAAGGATATCTTACCTATTGATGCTTCTCAGGACCCTTTTCCTCACTTGGTTCTTCCCAAGTCGTTTGATTTTTC
TGGGCAAGGTCCTATAACCTCGGTTGGTTCTTCATCTGGTGCATCTCCTGTTATCCCTGATGTTTCTCCTGATATTGGTGTTTCTGATGGTGGTACTTGTGTTTTATCAC
CGAATGGTTGTGCTCCAATCGAGGCCTCCACTGTTGATGTTGTTAATACAGGAGAATCGTCTATTGTAGCTACTGATTTGCCTTCCATCCCTGGTGCTAATGACCCGGTT
TCTTCTAGTTTAGTTGTGTCTCGTCGGTCTTCAAGATCTATCAAGCCGCCAACATACTTGAAAGACTATCATTGTAGTCTTCTTAATGCTGAGCCTATACCACAGTCTTC
TACTAGCCATCCTCTACACCATTTTATTTCATATATTAGCCTTTCTCCTACCTATAGCAAAATCCTGGAGCTGTTCGGTGGTCGGAATTGGTATACCAATTCCGATGGCC
ACCACGAAATCAATGTCATCGATGAAGCTGGGTCGTCATCGATGCAAGTGTATGTGAACGAGGATCAGAATCAGAATCAGCTTACCGTTGTTAACGAAAAAACGTCAAAA
CACAAGATTGATCTCCGCTGGGCTAAATCTAAATCTCATGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCATCTTCAGTTGCTTCTTCGTCCAATGCTGATTCGTTGAGTAATTACAATGCTGATCAGTTCCAAGGGCTTTTGACTTTTCTGCAGTCTCATTTGGCATCCATGAA
GCCAACATCCGATTCTGGTGCCTCTTCTTCCAGTCATGTGGCAGGGGCATCATCGCATATCTGTTTTTCTCGTGATATGTTTACTTCTCTGCTGCCTACATCTGGTATTT
CAGTCACTTTGCCAAATAATTCTCGGATTCATGCCAAGTCCTCTTTGAAGACGATTGGCAAGGCTGAGCTCTGGAATGGTTTATATCTTCTGCGTGCAGATGCTTCTCGA
CTTGGCCACCCTTCTGATAAACACATGTTAGCATTAAAGGATATCTTACCTATTGATGCTTCTCAGGACCCTTTTCCTCACTTGGTTCTTCCCAAGTCGTTTGATTTTTC
TGGGCAAGGTCCTATAACCTCGGTTGGTTCTTCATCTGGTGCATCTCCTGTTATCCCTGATGTTTCTCCTGATATTGGTGTTTCTGATGGTGGTACTTGTGTTTTATCAC
CGAATGGTTGTGCTCCAATCGAGGCCTCCACTGTTGATGTTGTTAATACAGGAGAATCGTCTATTGTAGCTACTGATTTGCCTTCCATCCCTGGTGCTAATGACCCGGTT
TCTTCTAGTTTAGTTGTGTCTCGTCGGTCTTCAAGATCTATCAAGCCGCCAACATACTTGAAAGACTATCATTGTAGTCTTCTTAATGCTGAGCCTATACCACAGTCTTC
TACTAGCCATCCTCTACACCATTTTATTTCATATATTAGCCTTTCTCCTACCTATAGCAAAATCCTGGAGCTGTTCGGTGGTCGGAATTGGTATACCAATTCCGATGGCC
ACCACGAAATCAATGTCATCGATGAAGCTGGGTCGTCATCGATGCAAGTGTATGTGAACGAGGATCAGAATCAGAATCAGCTTACCGTTGTTAACGAAAAAACGTCAAAA
CACAAGATTGATCTCCGCTGGGCTAAATCTAAATCTCATGGCTAA
Protein sequenceShow/hide protein sequence
MPSSVASSSNADSLSNYNADQFQGLLTFLQSHLASMKPTSDSGASSSSHVAGASSHICFSRDMFTSLLPTSGISVTLPNNSRIHAKSSLKTIGKAELWNGLYLLRADASR
LGHPSDKHMLALKDILPIDASQDPFPHLVLPKSFDFSGQGPITSVGSSSGASPVIPDVSPDIGVSDGGTCVLSPNGCAPIEASTVDVVNTGESSIVATDLPSIPGANDPV
SSSLVVSRRSSRSIKPPTYLKDYHCSLLNAEPIPQSSTSHPLHHFISYISLSPTYSKILELFGGRNWYTNSDGHHEINVIDEAGSSSMQVYVNEDQNQNQLTVVNEKTSK
HKIDLRWAKSKSHG