; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g28740 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g28740
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionp55
Genome locationchr3:20599351..20599875
RNA-Seq ExpressionMoc03g28740
SyntenyMoc03g28740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056836.1 p55 [Cucumis melo var. makuwa]3.4e-0638.76Show/hide
Query:  LHSPPASPSKLDSPRQKYPSNNYRPVPVTPTIKTPKPRDAKRRRSPSS-SERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLMVNMEHMAKMVRRAD
        + +PP SP + ++P+    S+     P TP     K R A    SP+  SE D PPT + +TD A+         G     L G + +M  M K V R +
Subjt:  LHSPPASPSKLDSPRQKYPSNNYRPVPVTPTIKTPKPRDAKRRRSPSS-SERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLMVNMEHMAKMVRRAD

Query:  FDLRSDPVLACLVSAQTVMMACTADLISR
          L SDP+LAC VSAQT++MACTA+L+S+
Subjt:  FDLRSDPVLACLVSAQTVMMACTADLISR

KAG6584107.1 hypothetical protein SDJN03_20039, partial [Cucurbita argyrosperma subsp. sororia]8.2e-0839.55Show/hide
Query:  LHSPPASPSKLDSPRQKYPSNNYRPVPVTPTIKTPKPRDAKRRRSPSSSERDQPPTNRQRTDRADDGQKVELGEGG--STFSLYGLMVNMEHMAKMVRR-
        + S P SP      ++  P +   P PVTP ++  + R A    SP S+   +PPT R+R   + DG K+E GE    S+  L  L+ NME + K ++R 
Subjt:  LHSPPASPSKLDSPRQKYPSNNYRPVPVTPTIKTPKPRDAKRRRSPSSSERDQPPTNRQRTDRADDGQKVELGEGG--STFSLYGLMVNMEHMAKMVRR-

Query:  -ADFDLRSDPVLACLVSAQTVMMACTADLISRRP
             L  DP+L CLVS+QT MM C A LISR P
Subjt:  -ADFDLRSDPVLACLVSAQTVMMACTADLISRRP

KGN64496.1 hypothetical protein Csa_013860 [Cucumis sativus]1.6e-0835.98Show/hide
Query:  GEYHREHSSRGLHSPPASPSKLDSPRQKYPSNNYRPVPVTPTIKTPKPRDAKRRRSPSSS----ERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLM
        GE +  H   G+ +PP+SPSK ++P  K+P  +     V P  +TP P   K+R +P S     + D+PPT +++TD A++G         S   +  L+
Subjt:  GEYHREHSSRGLHSPPASPSKLDSPRQKYPSNNYRPVPVTPTIKTPKPRDAKRRRSPSSS----ERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLM

Query:  VNMEHMAKMVRRA---DFDLRSDPVLACLVSAQTVMMACTADLISRRPQDYRNYKQPHLSPSPN
          +E M KM++R       L SDP+LAC VSAQ ++ ACTA+LISR  +  +     H   S N
Subjt:  VNMEHMAKMVRRA---DFDLRSDPVLACLVSAQTVMMACTADLISRRPQDYRNYKQPHLSPSPN

TrEMBL top hitse value%identityAlignment
A0A0A0LX14 p558.0e-0935.98Show/hide
Query:  GEYHREHSSRGLHSPPASPSKLDSPRQKYPSNNYRPVPVTPTIKTPKPRDAKRRRSPSSS----ERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLM
        GE +  H   G+ +PP+SPSK ++P  K+P  +     V P  +TP P   K+R +P S     + D+PPT +++TD A++G         S   +  L+
Subjt:  GEYHREHSSRGLHSPPASPSKLDSPRQKYPSNNYRPVPVTPTIKTPKPRDAKRRRSPSSS----ERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLM

Query:  VNMEHMAKMVRRA---DFDLRSDPVLACLVSAQTVMMACTADLISRRPQDYRNYKQPHLSPSPN
          +E M KM++R       L SDP+LAC VSAQ ++ ACTA+LISR  +  +     H   S N
Subjt:  VNMEHMAKMVRRA---DFDLRSDPVLACLVSAQTVMMACTADLISRRPQDYRNYKQPHLSPSPN

A0A5D3BJN2 p551.7e-0638.76Show/hide
Query:  LHSPPASPSKLDSPRQKYPSNNYRPVPVTPTIKTPKPRDAKRRRSPSS-SERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLMVNMEHMAKMVRRAD
        + +PP SP + ++P+    S+     P TP     K R A    SP+  SE D PPT + +TD A+         G     L G + +M  M K V R +
Subjt:  LHSPPASPSKLDSPRQKYPSNNYRPVPVTPTIKTPKPRDAKRRRSPSS-SERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLMVNMEHMAKMVRRAD

Query:  FDLRSDPVLACLVSAQTVMMACTADLISR
          L SDP+LAC VSAQT++MACTA+L+S+
Subjt:  FDLRSDPVLACLVSAQTVMMACTADLISR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGAGTATCACCGTGAACATAGTAGCCGCGGGCTCCATTCTCCCCCAGCATCGCCCTCCAAATTAGACTCACCACGCCAAAAATACCCTTCCAATAATTACCGCCC
AGTCCCAGTAACGCCGACGATTAAGACTCCCAAGCCCCGTGATGCAAAGAGGAGACGGAGCCCCAGCTCCAGCGAGCGTGATCAGCCTCCAACCAACAGGCAACGAACCG
ACAGGGCCGATGATGGCCAGAAGGTGGAGTTGGGTGAGGGAGGCTCTACTTTTTCATTGTATGGTCTGATGGTGAATATGGAGCACATGGCTAAGATGGTGCGGAGGGCA
GATTTTGATTTGAGGAGTGATCCTGTGCTGGCTTGCCTTGTGTCGGCGCAGACTGTGATGATGGCCTGCACCGCCGACCTCATCTCCAGGAGACCACAAGACTACCGCAA
TTATAAACAACCTCATCTTTCACCTTCTCCTAACACATCTCTTAACGGGGCTGCACTCAACAATAGGAACAACAACAATAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGAGTATCACCGTGAACATAGTAGCCGCGGGCTCCATTCTCCCCCAGCATCGCCCTCCAAATTAGACTCACCACGCCAAAAATACCCTTCCAATAATTACCGCCC
AGTCCCAGTAACGCCGACGATTAAGACTCCCAAGCCCCGTGATGCAAAGAGGAGACGGAGCCCCAGCTCCAGCGAGCGTGATCAGCCTCCAACCAACAGGCAACGAACCG
ACAGGGCCGATGATGGCCAGAAGGTGGAGTTGGGTGAGGGAGGCTCTACTTTTTCATTGTATGGTCTGATGGTGAATATGGAGCACATGGCTAAGATGGTGCGGAGGGCA
GATTTTGATTTGAGGAGTGATCCTGTGCTGGCTTGCCTTGTGTCGGCGCAGACTGTGATGATGGCCTGCACCGCCGACCTCATCTCCAGGAGACCACAAGACTACCGCAA
TTATAAACAACCTCATCTTTCACCTTCTCCTAACACATCTCTTAACGGGGCTGCACTCAACAATAGGAACAACAACAATAATTGA
Protein sequenceShow/hide protein sequence
MGEYHREHSSRGLHSPPASPSKLDSPRQKYPSNNYRPVPVTPTIKTPKPRDAKRRRSPSSSERDQPPTNRQRTDRADDGQKVELGEGGSTFSLYGLMVNMEHMAKMVRRA
DFDLRSDPVLACLVSAQTVMMACTADLISRRPQDYRNYKQPHLSPSPNTSLNGAALNNRNNNNN