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Moc03g29290 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g29290
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCentromere protein S-like
Genome locationchr3:20926568..20928386
RNA-Seq ExpressionMoc03g29290
SyntenyMoc03g29290
Gene Ontology termsGO:0000712 - resolution of meiotic recombination intermediates (biological process)
GO:0006312 - mitotic recombination (biological process)
GO:0007129 - synapsis (biological process)
GO:0031297 - replication fork processing (biological process)
GO:0036297 - interstrand cross-link repair (biological process)
GO:0043240 - Fanconi anaemia nuclear complex (cellular component)
GO:0071821 - FANCM-MHF complex (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR009072 - Histone-fold
IPR029003 - CENP-S/Mhf1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004154006.1 protein MHF1 homolog isoform X2 [Cucumis sativus]1.1e-5286.82Show/hide
Query:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLK
        METG EEDD+A+ELL DRFRLS+ISIAEAEA ++GMEISEPVMTCVA+LAFKYTKQLAKDLELFAQHAGRKSVNTEDVIL+AHRNEHLAA LTS CNDLK
Subjt:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLK

Query:  TKEPQTERKRKKASKKEDRDRGVVHINDA
        TKEPQ+ERKRKKA KK+DRDRG VHI DA
Subjt:  TKEPQTERKRKKASKKEDRDRGVVHINDA

XP_008440159.1 PREDICTED: centromere protein S isoform X2 [Cucumis melo]9.9e-5184.5Show/hide
Query:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLK
        MET  EEDD+A+ELL DRFRLSTISIAEAEA ++GMEISEPVMTCVA+LAFK+TKQLAKDLELFAQHAGRKSVNTEDVIL+AHRNEHLAA LTS CNDLK
Subjt:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLK

Query:  TKEPQTERKRKKASKKEDRDRGVVHINDA
         KEPQ+ERKRKKA KK+DRDRG VHI +A
Subjt:  TKEPQTERKRKKASKKEDRDRGVVHINDA

XP_011652290.1 protein MHF1 homolog isoform X1 [Cucumis sativus]7.6e-5185.38Show/hide
Query:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKY-TKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDL
        METG EEDD+A+ELL DRFRLS+ISIAEAEA ++GMEISEPVMTCVA+LAFKY T+QLAKDLELFAQHAGRKSVNTEDVIL+AHRNEHLAA LTS CNDL
Subjt:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKY-TKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDL

Query:  KTKEPQTERKRKKASKKEDRDRGVVHINDA
        KTKEPQ+ERKRKKA KK+DRDRG VHI DA
Subjt:  KTKEPQTERKRKKASKKEDRDRGVVHINDA

XP_022137214.1 protein MHF1 homolog [Momordica charantia]6.8e-6098.46Show/hide
Query:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKY-TKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDL
        METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKY T+QLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDL
Subjt:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKY-TKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDL

Query:  KTKEPQTERKRKKASKKEDRDRGVVHINDA
        KTKEPQTERKRKKASKKEDRDRGVVHINDA
Subjt:  KTKEPQTERKRKKASKKEDRDRGVVHINDA

XP_038894699.1 protein MHF1 homolog isoform X2 [Benincasa hispida]8.9e-5286.82Show/hide
Query:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLK
        M+TG EED +A+ELL DRFRLSTISIAEAEA R+GMEISEPVMTCVA+LAFKYTKQLAKDLELF QHAGRKSVNTEDVILSAHRNEHL+A LTS CNDLK
Subjt:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLK

Query:  TKEPQTERKRKKASKKEDRDRGVVHINDA
        TKEPQ+ERKRKKA KKEDRDRG VHI DA
Subjt:  TKEPQTERKRKKASKKEDRDRGVVHINDA

TrEMBL top hitse value%identityAlignment
A0A0A0LR97 Uncharacterized protein5.1e-5386.82Show/hide
Query:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLK
        METG EEDD+A+ELL DRFRLS+ISIAEAEA ++GMEISEPVMTCVA+LAFKYTKQLAKDLELFAQHAGRKSVNTEDVIL+AHRNEHLAA LTS CNDLK
Subjt:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLK

Query:  TKEPQTERKRKKASKKEDRDRGVVHINDA
        TKEPQ+ERKRKKA KK+DRDRG VHI DA
Subjt:  TKEPQTERKRKKASKKEDRDRGVVHINDA

A0A1S3B173 centromere protein S isoform X24.8e-5184.5Show/hide
Query:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLK
        MET  EEDD+A+ELL DRFRLSTISIAEAEA ++GMEISEPVMTCVA+LAFK+TKQLAKDLELFAQHAGRKSVNTEDVIL+AHRNEHLAA LTS CNDLK
Subjt:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLK

Query:  TKEPQTERKRKKASKKEDRDRGVVHINDA
         KEPQ+ERKRKKA KK+DRDRG VHI +A
Subjt:  TKEPQTERKRKKASKKEDRDRGVVHINDA

A0A5A7UM53 Centromere protein S isoform X13.4e-4983.08Show/hide
Query:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKY-TKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDL
        MET  EEDD+A+ELL DRFRLSTISIAEAEA ++GMEISEPVMTCVA+LAFK+ T+QLAKDLELFAQHAGRKSVNTEDVIL+AHRNEHLAA LTS CNDL
Subjt:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKY-TKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDL

Query:  KTKEPQTERKRKKASKKEDRDRGVVHINDA
        K KEPQ+ERKRKKA KK+DRDRG VHI +A
Subjt:  KTKEPQTERKRKKASKKEDRDRGVVHINDA

A0A5D3BHQ8 Centromere protein S isoform X24.8e-5184.5Show/hide
Query:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLK
        MET  EEDD+A+ELL DRFRLSTISIAEAEA ++GMEISEPVMTCVA+LAFK+TKQLAKDLELFAQHAGRKSVNTEDVIL+AHRNEHLAA LTS CNDLK
Subjt:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLK

Query:  TKEPQTERKRKKASKKEDRDRGVVHINDA
         KEPQ+ERKRKKA KK+DRDRG VHI +A
Subjt:  TKEPQTERKRKKASKKEDRDRGVVHINDA

A0A6J1C623 protein MHF1 homolog3.3e-6098.46Show/hide
Query:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKY-TKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDL
        METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKY T+QLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDL
Subjt:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKY-TKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDL

Query:  KTKEPQTERKRKKASKKEDRDRGVVHINDA
        KTKEPQTERKRKKASKKEDRDRGVVHINDA
Subjt:  KTKEPQTERKRKKASKKEDRDRGVVHINDA

SwissProt top hitse value%identityAlignment
E1BSW7 Centromere protein S1.2e-0629.06Show/hide
Query:  GREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLKTKE
        G E+ +   + L      +T  + +  A+  G+  S+  +  ++E+ F+  +  A+DLE+FA+HA R ++ +EDV L A R+  L   +T   ++L +  
Subjt:  GREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLKTKE

Query:  -PQTERKRKKASKKEDR
          Q E+K+KK+S  + R
Subjt:  -PQTERKRKKASKKEDR

Q2TBR7 Centromere protein S2.8e-0835.58Show/hide
Query:  IAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLKTKEPQTERKRKKASKKEDRDRGVVH
        + E  A    M+ S+  +  ++E+ F   +  AKDLE+FA+HA R ++NTEDV L A R+  L   +T    D+   +   E+K KK  K ED +R  V 
Subjt:  IAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLKTKEPQTERKRKKASKKEDRDRGVVH

Query:  INDA
          +A
Subjt:  INDA

Q6NRI8 Centromere protein S1.1e-0728.95Show/hide
Query:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLK
        M  G+EE  + T+ L         S+ +  A    ++ S+  +  ++E+ F+  +  AKDLE+FA+HA R ++N +DV L A R+  L A ++   +++ 
Subjt:  METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLK

Query:  TKEPQTERKRKKAS
            + + K+KK S
Subjt:  TKEPQTERKRKKAS

Q8N2Z9 Centromere protein S1.8e-0736.56Show/hide
Query:  IAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLKTKEPQTERKRKKASKKED
        + E  A    M+ S+  +  ++EL F+  +  AKDLE+FA+HA R ++NTEDV L A R+  L   +T    ++   +   ERK +K  K ED
Subjt:  IAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLKTKEPQTERKRKKASKKED

Q9FI55 Protein MHF1 homolog2.5e-3670.18Show/hide
Query:  EDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLKTKEPQT
        E+ +  +L+ DRFRLS ISIAEAEAK+NGMEI  PV+ CVA+LAFKY + +AKDLELFA HAGRK VN +DV+LSAHRN++LAASL S CN+LK KEPQ+
Subjt:  EDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLKTKEPQT

Query:  ERKRKKAS-KKEDR
        ERKRKK S KKED+
Subjt:  ERKRKKAS-KKEDR

Arabidopsis top hitse value%identityAlignment
AT5G50930.1 Histone superfamily protein1.7e-3770.18Show/hide
Query:  EDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLKTKEPQT
        E+ +  +L+ DRFRLS ISIAEAEAK+NGMEI  PV+ CVA+LAFKY + +AKDLELFA HAGRK VN +DV+LSAHRN++LAASL S CN+LK KEPQ+
Subjt:  EDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLKTKEPQT

Query:  ERKRKKAS-KKEDR
        ERKRKK S KKED+
Subjt:  ERKRKKAS-KKEDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTGGGCGGGAGGAAGACGACACCGCCACCGAACTCTTGAGCGACCGATTCCGACTCTCCACCATTTCTATCGCTGAAGCTGAAGCGAAGAGAAACGGCATGGA
AATCTCTGAACCCGTGATGACCTGTGTCGCTGAATTAGCGTTCAAATATACAAAACAGTTGGCAAAGGACCTTGAGTTATTTGCTCAACATGCTGGTAGGAAATCTGTGA
ATACGGAAGACGTCATACTATCAGCCCATAGAAACGAGCATCTCGCTGCCTCATTAACATCCTTCTGCAATGATCTAAAGACAAAAGAACCTCAAACTGAGAGGAAGCGG
AAAAAGGCATCGAAAAAGGAAGACAGAGATAGAGGTGTAGTGCATATTAATGACGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACTGGGCGGGAGGAAGACGACACCGCCACCGAACTCTTGAGCGACCGATTCCGACTCTCCACCATTTCTATCGCTGAAGCTGAAGCGAAGAGAAACGGCATGGA
AATCTCTGAACCCGTGATGACCTGTGTCGCTGAATTAGCGTTCAAATATACAAAACAGTTGGCAAAGGACCTTGAGTTATTTGCTCAACATGCTGGTAGGAAATCTGTGA
ATACGGAAGACGTCATACTATCAGCCCATAGAAACGAGCATCTCGCTGCCTCATTAACATCCTTCTGCAATGATCTAAAGACAAAAGAACCTCAAACTGAGAGGAAGCGG
AAAAAGGCATCGAAAAAGGAAGACAGAGATAGAGGTGTAGTGCATATTAATGACGCATAA
Protein sequenceShow/hide protein sequence
METGREEDDTATELLSDRFRLSTISIAEAEAKRNGMEISEPVMTCVAELAFKYTKQLAKDLELFAQHAGRKSVNTEDVILSAHRNEHLAASLTSFCNDLKTKEPQTERKR
KKASKKEDRDRGVVHINDA