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Moc03g31210 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g31210
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptiontranscription factor PRE3-like
Genome locationchr3:22147807..22148170
RNA-Seq ExpressionMoc03g31210
SyntenyMoc03g31210
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0040008 - regulation of growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044293 - Transcription factor PRE


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573012.1 putative serine/threonine-protein kinase PBL3, partial [Cucurbita argyrosperma subsp. sororia]2.9e-3390.11Show/hide
Query:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ
        MSGRSRSR S+  VRISDEQITDL+HKLQQLLPEIRN HSDKVS+AKVLQETCNYIR LHREVDDLSERLS LLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ

XP_004152438.1 transcription factor PRE3 [Cucumis sativus]2.9e-3390.11Show/hide
Query:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ
        MSGRSRSR S+  VRISDEQITDL+HKLQQLLPEIRN HSDKVS+AKVLQETCNYIR LHREVDDLSERLS LLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ

XP_016899225.1 PREDICTED: transcription factor PRE3-like [Cucumis melo]5.9e-3491.21Show/hide
Query:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ
        MSGRSRSR S+ GVRISDEQITDL+HKLQQLLPEIRN HSDKVS+AKVLQETCNYIR LHREVDDLSERLS LLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ

XP_022137442.1 transcription factor PRE3-like [Momordica charantia]5.5e-40100Show/hide
Query:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ
        MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ

XP_022955105.1 transcription factor PRE3-like [Cucurbita moschata]2.9e-3390.11Show/hide
Query:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ
        MSGRSRSR S+  VRISDEQITDL+HKLQQLLPEIRN HSDKVS+AKVLQETCNYIR LHREVDDLSERLS LLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ

TrEMBL top hitse value%identityAlignment
A0A0A0LQQ1 BHLH domain-containing protein1.4e-3390.11Show/hide
Query:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ
        MSGRSRSR S+  VRISDEQITDL+HKLQQLLPEIRN HSDKVS+AKVLQETCNYIR LHREVDDLSERLS LLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ

A0A1S4DU40 transcription factor PRE3-like2.9e-3491.21Show/hide
Query:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ
        MSGRSRSR S+ GVRISDEQITDL+HKLQQLLPEIRN HSDKVS+AKVLQETCNYIR LHREVDDLSERLS LLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ

A0A6J1C896 transcription factor PRE3-like2.7e-40100Show/hide
Query:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ
        MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ

A0A6J1GU92 transcription factor PRE3-like1.4e-3390.11Show/hide
Query:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ
        MSGRSRSR S+  VRISDEQITDL+HKLQQLLPEIRN HSDKVS+AKVLQETCNYIR LHREVDDLSERLS LLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ

A0A6J1K5U5 transcription factor PRE3-like1.2e-3289.01Show/hide
Query:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ
        MSG SRSR S+  VRISDEQITDL+HKLQQLLPEIRN HSDKVS+AKVLQETCNYIR LHREVDDLSERLS LLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ

SwissProt top hitse value%identityAlignment
A2Z730 Transcription factor ILI74.9e-2368.13Show/hide
Query:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSD--TAQAAIIRSLL
        MS RSRSR S+   RI+DEQI DL+ KLQ LLPE R   +D+V SA+VLQETC+YIR LHREVDDLSERL+ LLA +D  TAQAA+IR LL
Subjt:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSD--TAQAAIIRSLL

B8APB5 Transcription factor ILI63.4e-2472.22Show/hide
Query:  SGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSD--TAQAAIIRSLL
        S RSRSR S G  RI+DEQI+DL+ KLQ LLPE R   +D+V S++VLQETCNYIR LH+EVDDLSERLS LLATSD  +AQAAIIRSLL
Subjt:  SGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSD--TAQAAIIRSLL

Q0DUR2 Transcription factor ILI63.4e-2472.22Show/hide
Query:  SGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSD--TAQAAIIRSLL
        S RSRSR S G  RI+DEQI+DL+ KLQ LLPE R   +D+V S++VLQETCNYIR LH+EVDDLSERLS LLATSD  +AQAAIIRSLL
Subjt:  SGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSD--TAQAAIIRSLL

Q8GW32 Transcription factor PRE62.0e-2469.89Show/hide
Query:  MSGR--SRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSD--TAQAAIIRSLL
        MS R  SRSR S G  RISD+QI+DL+ KLQ L+PE+R   SDKVS++KVLQETCNYIR LHREVDDLS+RLS LLA++D  +A+AAIIRSLL
Subjt:  MSGR--SRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSD--TAQAAIIRSLL

Q9CA64 Transcription factor PRE34.6e-2977.42Show/hide
Query:  MSG-RSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNA-HSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ
        MSG RSRSR S+G  RIS++QI DLI KLQQLLPE+R++  SDKVS+A+VLQ+TCNYIR LHREVDDLSERLS LLA SDTAQAA+IRSLLTQ
Subjt:  MSG-RSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNA-HSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ

Arabidopsis top hitse value%identityAlignment
AT1G26945.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.4e-2569.89Show/hide
Query:  MSGR--SRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSD--TAQAAIIRSLL
        MS R  SRSR S G  RISD+QI+DL+ KLQ L+PE+R   SDKVS++KVLQETCNYIR LHREVDDLS+RLS LLA++D  +A+AAIIRSLL
Subjt:  MSGR--SRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSD--TAQAAIIRSLL

AT1G74500.1 activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 13.2e-3077.42Show/hide
Query:  MSG-RSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNA-HSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ
        MSG RSRSR S+G  RIS++QI DLI KLQQLLPE+R++  SDKVS+A+VLQ+TCNYIR LHREVDDLSERLS LLA SDTAQAA+IRSLLTQ
Subjt:  MSG-RSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNA-HSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ

AT3G28857.1 basic helix-loop-helix (bHLH) DNA-binding family protein1.6e-2161.96Show/hide
Query:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEI-RNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLL--ATSDTAQAAIIRSLL
        MS R RSR ++   RISD+Q+ DL+ KL+Q LPEI     SDKVS++KVLQETCNYIR+LHREVD+LS+RLS LL     D+ +AA+IRSLL
Subjt:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEI-RNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLL--ATSDTAQAAIIRSLL

AT3G47710.1 BANQUO 32.7e-2161.54Show/hide
Query:  SGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEI-RNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ
        S +SRSR   G   I+DEQI DL+ +L +LLPE+  N  S KVS+++VLQETC+YIR L +EVDDLSERLS LL ++D+AQAA+IRSLL Q
Subjt:  SGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEI-RNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ

AT5G15160.1 BANQUO 23.6e-2159.78Show/hide
Query:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIR-NAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSD--TAQAAIIRSLL
        MS   RSR ++   RISD+QITDLI KL+Q +PEIR N  S+ VS++KVLQETCNYIR L++E DDLS+RL+ LL + D  + QAA+IRSL+
Subjt:  MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIR-NAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSD--TAQAAIIRSLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGGAGATCTCGTTCGAGGCCATCAGCTGGTGGTGTGAGAATCAGCGACGAACAGATCACCGACCTCATCCACAAGCTCCAACAGCTCTTGCCTGAGATTCGCAA
CGCCCATTCCGACAAGGTTTCGTCTGCAAAGGTTTTGCAGGAAACGTGCAACTACATTCGGAGGCTACACCGGGAGGTGGACGATCTGAGCGAGCGGCTGTCGGGGTTGT
TGGCGACGTCGGACACGGCCCAAGCGGCCATTATAAGAAGCTTGCTCACGCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGGAGATCTCGTTCGAGGCCATCAGCTGGTGGTGTGAGAATCAGCGACGAACAGATCACCGACCTCATCCACAAGCTCCAACAGCTCTTGCCTGAGATTCGCAA
CGCCCATTCCGACAAGGTTTCGTCTGCAAAGGTTTTGCAGGAAACGTGCAACTACATTCGGAGGCTACACCGGGAGGTGGACGATCTGAGCGAGCGGCTGTCGGGGTTGT
TGGCGACGTCGGACACGGCCCAAGCGGCCATTATAAGAAGCTTGCTCACGCAGTGA
Protein sequenceShow/hide protein sequence
MSGRSRSRPSAGGVRISDEQITDLIHKLQQLLPEIRNAHSDKVSSAKVLQETCNYIRRLHREVDDLSERLSGLLATSDTAQAAIIRSLLTQ