; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g32290 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g32290
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionATP-dependent Clp protease adapter protein ClpS
Genome locationchr3:22965151..22968153
RNA-Seq ExpressionMoc03g32290
SyntenyMoc03g32290
Gene Ontology termsGO:1903052 - positive regulation of proteolysis involved in cellular protein catabolic process (biological process)
GO:0008233 - peptidase activity (molecular function)
GO:0030674 - protein binding, bridging (molecular function)
InterPro domainsIPR003769 - Adaptor protein ClpS, core
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR022935 - ATP-dependent Clp protease adaptor protein ClpS


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012114.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]7.0e-6671.21Show/hide
Query:  RLHFFWNLLPQITLH----------SFNHTERGYGSCNLRSSTSFTQPLLQSNET-----------------RNRSTLMMLSVAELGKGGGLLEKPTIEK
        RLHF  NL  QITLH               E G+GSC+LRS+ SFT P LQ ++                  RNRS L MLSVAELGKGGGLLEKP  EK
Subjt:  RLHFFWNLLPQITLH----------SFNHTERGYGSCNLRSSTSFTQPLLQSNET-----------------RNRSTLMMLSVAELGKGGGLLEKPTIEK

Query:  TTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        TTPGRESEF+VRKSRK APPYRVLLHNDN+NKREYVVQVLMKVIPGMT+DNAVNIMQEAHYNGM+VVIICAQVDAEDHCMQLRGNGLLSSIEPAS+GC
Subjt:  TTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_008456997.1 PREDICTED: ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Cucumis melo]8.0e-6294.53Show/hide
Query:  ETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIIC
        + RNRS LMM+SVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKT+PPYRVLLHNDN+NKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGM+VVIIC
Subjt:  ETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIIC

Query:  AQVDAEDHCMQLRGNGLLSSIEPASDGC
        AQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  AQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_022136971.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X1 [Momordica charantia]8.5e-6498.44Show/hide
Query:  ETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIIC
        + RNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIIC
Subjt:  ETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIIC

Query:  AQVDAEDHCMQLRGNGLLSSIEPASDGC
        AQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  AQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_022136972.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X2 [Momordica charantia]3.3e-100100Show/hide
Query:  MSHSEEKPLSGVAARLHFFWNLLPQITLHSFNHTERGYGSCNLRSSTSFTQPLLQSNETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRK
        MSHSEEKPLSGVAARLHFFWNLLPQITLHSFNHTERGYGSCNLRSSTSFTQPLLQSNETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRK
Subjt:  MSHSEEKPLSGVAARLHFFWNLLPQITLHSFNHTERGYGSCNLRSSTSFTQPLLQSNETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRK

Query:  SRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        SRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  SRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_038894047.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Benincasa hispida]8.0e-6295.31Show/hide
Query:  ETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIIC
        + RNRS LMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRK RKT+PPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGM+VVIIC
Subjt:  ETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIIC

Query:  AQVDAEDHCMQLRGNGLLSSIEPASDGC
        AQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  AQVDAEDHCMQLRGNGLLSSIEPASDGC

TrEMBL top hitse value%identityAlignment
A0A0A0LSY6 ClpS domain-containing protein1.5e-6193.75Show/hide
Query:  ETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIIC
        + RNRS LMM+SVAELGKGGGLLEKP IEKTTPGRESEFDVRKSRKT+PPYRVLLHNDN+NKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGM+VVIIC
Subjt:  ETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIIC

Query:  AQVDAEDHCMQLRGNGLLSSIEPASDGC
        AQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  AQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A1S3C561 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like3.9e-6294.53Show/hide
Query:  ETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIIC
        + RNRS LMM+SVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKT+PPYRVLLHNDN+NKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGM+VVIIC
Subjt:  ETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIIC

Query:  AQVDAEDHCMQLRGNGLLSSIEPASDGC
        AQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  AQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A6J1C511 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X14.1e-6498.44Show/hide
Query:  ETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIIC
        + RNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIIC
Subjt:  ETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIIC

Query:  AQVDAEDHCMQLRGNGLLSSIEPASDGC
        AQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  AQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A6J1C6X4 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X21.6e-100100Show/hide
Query:  MSHSEEKPLSGVAARLHFFWNLLPQITLHSFNHTERGYGSCNLRSSTSFTQPLLQSNETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRK
        MSHSEEKPLSGVAARLHFFWNLLPQITLHSFNHTERGYGSCNLRSSTSFTQPLLQSNETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRK
Subjt:  MSHSEEKPLSGVAARLHFFWNLLPQITLHSFNHTERGYGSCNLRSSTSFTQPLLQSNETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRK

Query:  SRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        SRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  SRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A6J1KH35 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like4.3e-6171.35Show/hide
Query:  VAARLHFFWNLLPQITLHSFNHTERGYGSCNLRSSTS-----FTQPLLQSNE------TRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRK
        V +RL F  NLL QITLH       G     +    S     F  P    ++       R+RS LMMLSVA LG+GGGLL+KPTIEKTTPGRESEFDVRK
Subjt:  VAARLHFFWNLLPQITLHSFNHTERGYGSCNLRSSTS-----FTQPLLQSNE------TRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRK

Query:  SRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        SRK APPY+VLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAH+NGMSVVI+CAQVDAEDHCMQLRGNGL SSIEPASDGC
Subjt:  SRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

SwissProt top hitse value%identityAlignment
A0A2K3CNL6 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic3.8e-2252.29Show/hide
Query:  GGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLS
        GG+++ PT   TT  ++    V +S+K  P Y+VLLHNDNYNKREYVV+VL+KV+  +T+D+AV  MQEAH  G+++V+ C Q +AE +C  LR NGL S
Subjt:  GGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLS

Query:  SIEPASDGC
        +IEP   GC
Subjt:  SIEPASDGC

Q31QE7 ATP-dependent Clp protease adapter protein ClpS3.3e-1858.23Show/hide
Query:  RKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEP
        RK AP YRVLLHND++N  EYVV VLM+ +P +T   AV+IM EAH NG  +VI C    AE +C QL+ +GL SSIEP
Subjt:  RKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEP

Q3AUR5 ATP-dependent Clp protease adapter protein ClpS2.5e-1342.16Show/hide
Query:  EKPTIEKTTPGRESEFD--VRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSI
        E PT    +PG  +  D    + RK +P Y+VLLHND  N  EYV+  L +V+P ++  +A+ +M EAH  G+ +VI+C    AE +C  L+  GL SSI
Subjt:  EKPTIEKTTPGRESEFD--VRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSI

Query:  EP
        EP
Subjt:  EP

Q5N3U1 ATP-dependent Clp protease adapter protein ClpS1.5e-1556.16Show/hide
Query:  RKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGL
        RK AP YRVLLHND++N  EYVV VLM+ +P +T   AV+IM EAH NG  +VI C    AE +C QL+ +GL
Subjt:  RKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGL

Q9SX29 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic2.4e-5373.1Show/hide
Query:  NLRSSTSFTQPLLQSNETRNRSTLMMLSV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAV
        +L +S S  + L+      NRS LM LS  A LGKGGG+L+KP IEKTTPGRESEFD+RKS+K APPYRV+LHNDN+NKREYVVQVLMKVIPGMT+DNAV
Subjt:  NLRSSTSFTQPLLQSNETRNRSTLMMLSV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAV

Query:  NIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        NIMQEAH NG++VVI+CAQ DAE HCMQLRGNGLLSS+EP   GC
Subjt:  NIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

Arabidopsis top hitse value%identityAlignment
AT1G68660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein1.7e-5473.1Show/hide
Query:  NLRSSTSFTQPLLQSNETRNRSTLMMLSV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAV
        +L +S S  + L+      NRS LM LS  A LGKGGG+L+KP IEKTTPGRESEFD+RKS+K APPYRV+LHNDN+NKREYVVQVLMKVIPGMT+DNAV
Subjt:  NLRSSTSFTQPLLQSNETRNRSTLMMLSV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAV

Query:  NIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        NIMQEAH NG++VVI+CAQ DAE HCMQLRGNGLLSS+EP   GC
Subjt:  NIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

AT1G68660.2 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein4.4e-3455.86Show/hide
Query:  NLRSSTSFTQPLLQSNETRNRSTLMMLSV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAV
        +L +S S  + L+      NRS LM LS  A LGKGGG+L+KP IEKTTPGRESEFD+RKS+K APPYRV+LHNDN+NKREYVVQVLMK           
Subjt:  NLRSSTSFTQPLLQSNETRNRSTLMMLSV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTAPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAV

Query:  NIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
                            DAE HCMQLRGNGLLSS+EP   GC
Subjt:  NIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACATAGCGAAGAGAAACCACTCAGTGGAGTCGCTGCTCGTTTACATTTTTTTTGGAACCTGCTGCCCCAAATCACTCTTCATTCCTTCAACCACACGGAG
AGAGGCTATGGAAGCTGCAATTTGCGGTCGAGTACCTCTTTCACCCAACCACTTCTTCAATCAAACGAGACCAGAAACCGGAGCACCTTAATGATGTTATCAGTT
GCTGAGCTCGGAAAAGGTGGGGGGTTGTTGGAAAAGCCAACCATAGAGAAGACAACACCTGGTCGTGAATCTGAGTTTGACGTTAGGAAATCAAGGAAAACTGCC
CCGCCGTATCGAGTGCTGCTACATAACGACAATTACAATAAGCGGGAATACGTTGTGCAAGTTCTGATGAAGGTGATCCCTGGAATGACCCTTGACAATGCAGTC
AACATAATGCAGGAGGCACATTACAACGGGATGTCAGTGGTAATTATCTGCGCTCAAGTGGATGCAGAAGATCACTGTATGCAGCTGAGAGGCAACGGTCTTCTA
AGTTCAATCGAGCCTGCGAGTGATGGTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACATAGCGAAGAGAAACCACTCAGTGGAGTCGCTGCTCGTTTACATTTTTTTTGGAACCTGCTGCCCCAAATCACTCTTCATTCCTTCAACCACACGGAG
AGAGGCTATGGAAGCTGCAATTTGCGGTCGAGTACCTCTTTCACCCAACCACTTCTTCAATCAAACGAGACCAGAAACCGGAGCACCTTAATGATGTTATCAGTT
GCTGAGCTCGGAAAAGGTGGGGGGTTGTTGGAAAAGCCAACCATAGAGAAGACAACACCTGGTCGTGAATCTGAGTTTGACGTTAGGAAATCAAGGAAAACTGCC
CCGCCGTATCGAGTGCTGCTACATAACGACAATTACAATAAGCGGGAATACGTTGTGCAAGTTCTGATGAAGGTGATCCCTGGAATGACCCTTGACAATGCAGTC
AACATAATGCAGGAGGCACATTACAACGGGATGTCAGTGGTAATTATCTGCGCTCAAGTGGATGCAGAAGATCACTGTATGCAGCTGAGAGGCAACGGTCTTCTA
AGTTCAATCGAGCCTGCGAGTGATGGTTGTTGA
Protein sequenceShow/hide protein sequence
MSHSEEKPLSGVAARLHFFWNLLPQITLHSFNHTERGYGSCNLRSSTSFTQPLLQSNETRNRSTLMMLSVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTA
PPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMSVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC