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Moc03g32490 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g32490
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGTPase IMAP family member 1, putative
Genome locationchr3:23111891..23112238
RNA-Seq ExpressionMoc03g32490
SyntenyMoc03g32490
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652531.1 hypothetical protein Csa_013077, partial [Cucumis sativus]2.1e-1255.13Show/hide
Query:  MVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRILYYGGGFLAVTALFIATAIPY
        ++ FC+SSAI IATVSV I+ ELP  F+ LS+A+LLCF  V F +M   IF  + +ILY  GG L  ++ FIATAIPY
Subjt:  MVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRILYYGGGFLAVTALFIATAIPY

KAG6572911.1 hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]8.3e-3376.64Show/hide
Query:  MVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLIFWFLFMLI
        +VAFC+SSAIAIATVSVQIEK+LP  F FLS+ LLLCFG VAFGKMTK I  RV RILY  GG L VTALFIA+AIPYA YFQ IIFLIYLIFW +FML+
Subjt:  MVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLIFWFLFMLI

Query:  AHKAPSS
        AHK+ SS
Subjt:  AHKAPSS

KAG6584385.1 hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]2.8e-1253.12Show/hide
Query:  MVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLIFWFL
        MV FC+ +AIAIATVSVQI+ +L   F+FLS AL+ CF      K+ K    RV  ILY+ GGF  VTA FIA AIPYA +FQ +   +YL+F F+
Subjt:  MVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLIFWFL

KGN60003.2 hypothetical protein Csa_000735, partial [Cucumis sativus]2.3e-0653.45Show/hide
Query:  MVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRIL
        ++ FCLSSAI IATVSVQ + +LP  F+FLS+A+L+CF  V F +M   IF  + +IL
Subjt:  MVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRIL

OMO67964.1 hypothetical protein CCACVL1_20161 [Corchorus capsularis]4.6e-0744.12Show/hide
Query:  MVAFCLSSAIAIATVSVQI-EKELPFEFRFLSVALLLCFGCVAFGK--MTKPIFHRVPRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLIFWFLF
        +VAFCL S+I IA +  QI    LP  F  LS+A+LL F C+  GK       FHRV R+L   GGF  VTA FIA AIP+  + Q     +Y I +   
Subjt:  MVAFCLSSAIAIATVSVQI-EKELPFEFRFLSVALLLCFGCVAFGK--MTKPIFHRVPRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLIFWFLF

Query:  ML
        M+
Subjt:  ML

TrEMBL top hitse value%identityAlignment
A0A0A0LCY2 Uncharacterized protein2.1e-1849.15Show/hide
Query:  MVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLIFWFLFML-
        ++ FCLSSAI IATVSVQ + +LP  F+FLS+A+L+CF  V F +M   IF  + +ILY  GGFL  T  FIATAIPY  +F  I+ ++Y IF  +F++ 
Subjt:  MVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLIFWFLFML-

Query:  --IAHKAPSSSTTTTLSL
          I H   S S++ TL L
Subjt:  --IAHKAPSSSTTTTLSL

A0A0A0LQB6 Uncharacterized protein2.5e-2766.07Show/hide
Query:  MVAFCLSSAIAIATVSVQIE--KELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLIFWFLFM
        +VA C+SSAI IATVSVQIE  K+LP  F+FLS+ +LLCFG V F KMTKPIF  V +ILY  GGFL VTA FIATAIP+APYFQ IIF++YL+F F+FM
Subjt:  MVAFCLSSAIAIATVSVQIE--KELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLIFWFLFM

Query:  LIA---HKAPSS
        LI    ++ PSS
Subjt:  LIA---HKAPSS

A0A0A0LQP5 Uncharacterized protein1.3e-1240.83Show/hide
Query:  MVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRILYYGGGFLAVTALFIATAIPY-APYFQTIIFLIYLIF------
        ++  C+SSAI I T SVQI+ +LP  F+ LS+ +LLCF  V F +M + +F  +  ILY  G F+  T  FIATAI Y   +F TI+ ++Y IF      
Subjt:  MVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRILYYGGGFLAVTALFIATAIPY-APYFQTIIFLIYLIF------

Query:  WFLFMLIAHKAPSSSTTTTL
        + +F+ I H  PSS +++ +
Subjt:  WFLFMLIAHKAPSSSTTTTL

A0A0A0LSX4 Uncharacterized protein9.3e-1454.76Show/hide
Query:  MVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRILYYGGGFLAVTALFIATAIPYAPYFQT
        ++ FC+SSAI IATVSV I+ ELP  F+ LS+A+LLCF  V F +M   IF  + +ILY  GG L  ++ FIATAIPYA  F T
Subjt:  MVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRILYYGGGFLAVTALFIATAIPYAPYFQT

A0A7N2R866 Uncharacterized protein5.8e-0841.3Show/hide
Query:  MVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLI
        ++AFCL+SA+ IA +SVQ+  +LP  F   S+A+LL F  V   K   P F R  ++L   G F  VTA FIA  IP+  Y +   +++Y I
Subjt:  MVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGCGTTTTGCCTGTCGTCGGCCATAGCCATAGCCACAGTTTCAGTTCAGATAGAAAAAGAGCTACCTTTTGAGTTTCGGTTTCTATCGGTTGCCCTGTTGCTGTG
TTTTGGATGCGTGGCGTTTGGGAAGATGACAAAGCCCATATTCCATAGAGTTCCGCGAATATTGTATTATGGTGGCGGGTTTTTGGCAGTCACGGCGTTGTTCATAGCCA
CAGCAATTCCATATGCACCATATTTTCAGACCATAATCTTCCTCATTTACTTAATCTTCTGGTTCCTTTTCATGCTCATCGCCCACAAGGCTCCTTCTAGTTCTACCACC
ACTACCCTCTCACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGCGTTTTGCCTGTCGTCGGCCATAGCCATAGCCACAGTTTCAGTTCAGATAGAAAAAGAGCTACCTTTTGAGTTTCGGTTTCTATCGGTTGCCCTGTTGCTGTG
TTTTGGATGCGTGGCGTTTGGGAAGATGACAAAGCCCATATTCCATAGAGTTCCGCGAATATTGTATTATGGTGGCGGGTTTTTGGCAGTCACGGCGTTGTTCATAGCCA
CAGCAATTCCATATGCACCATATTTTCAGACCATAATCTTCCTCATTTACTTAATCTTCTGGTTCCTTTTCATGCTCATCGCCCACAAGGCTCCTTCTAGTTCTACCACC
ACTACCCTCTCACTTTGA
Protein sequenceShow/hide protein sequence
MVAFCLSSAIAIATVSVQIEKELPFEFRFLSVALLLCFGCVAFGKMTKPIFHRVPRILYYGGGFLAVTALFIATAIPYAPYFQTIIFLIYLIFWFLFMLIAHKAPSSSTT
TTLSL