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Moc03g32960 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g32960
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionATP synthase subunit beta, chloroplastic-like
Genome locationchr3:23444850..23446526
RNA-Seq ExpressionMoc03g32960
SyntenyMoc03g32960
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0009521 - photosystem (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0043229 - intracellular organelle (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEU96661.1 ATP synthase subunit beta, chloroplastic [Tanacetum cinerariifolium]2.3e-2073.85Show/hide
Query:  EMCLFIEILTRNGSSYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGP
        ++ +++ + ++   SYFTKTCHGKEEGGN+H WRAQYNGELYAAFGKDESLPKRN LILSQLVGP
Subjt:  EMCLFIEILTRNGSSYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGP
KAG8363423.1 hypothetical protein BUALT_Bualt19G0021100 [Buddleja alternifolia]3.3e-1976.47Show/hide
Query:  RNGSSYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGPAQGTWRSEE-DDY
        +  + YFTKTC GKEEGGNKH WRAQYNGELYAAFGKDESLPKRN LILSQL GPA    R EE  DY
Subjt:  RNGSSYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGPAQGTWRSEE-DDY
KAG8367908.1 hypothetical protein BUALT_Bualt16G0121700 [Buddleja alternifolia]2.8e-1875Show/hide
Query:  RNGSSYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGPAQGTWRSEE-DDY
        +  + YFTKTC GKEEG NKH WRAQYNGELYAAFGKDESLPKRN LILSQL GPA    R EE  DY
Subjt:  RNGSSYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGPAQGTWRSEE-DDY
PPR83386.1 hypothetical protein GOBAR_AA37328 [Gossypium barbadense]8.6e-2085Show/hide
Query:  SYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGPAQGTWRSEE
        SYFT TCHGKEEGGNKH WRAQYNGELYAAFGKDESLPKRN LILSQL GPA    R EE
Subjt:  SYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGPAQGTWRSEE
PPS07120.1 hypothetical protein GOBAR_AA13525 [Gossypium barbadense]1.9e-1994.12Show/hide
Query:  SYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGP
        SYFT TCHGKEEGGNKH WRAQYNGELYAAFGKDESLPKRN LILSQLVGP
Subjt:  SYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGP
TrEMBL top hitse value%identityAlignment
A0A2P5VX21 Uncharacterized protein ycf684.2e-2085Show/hide
Query:  SYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGPAQGTWRSEE
        SYFT TCHGKEEGGNKH WRAQYNGELYAAFGKDESLPKRN LILSQL GPA    R EE
Subjt:  SYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGPAQGTWRSEE
A0A2P5XJ56 Uncharacterized protein ycf682.3e-1890.2Show/hide
Query:  SYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGP
        SYFT TCHGKEEGGNKH WR QYNGELYAAFGKDESLPK N LILSQLVGP
Subjt:  SYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGP
A0A2P5XUU9 Uncharacterized protein ycf689.3e-2094.12Show/hide
Query:  SYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGP
        SYFT TCHGKEEGGNKH WRAQYNGELYAAFGKDESLPKRN LILSQLVGP
Subjt:  SYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGP
A0A6N2L1K4 Uncharacterized protein ycf681.0e-1871.83Show/hide
Query:  PDQCNEMCLFIEILTRNGSSYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGPA
        PDQCN MCLFI +LTRNGS             GNKH WRAQY GELYAAFGKDESLPKRN LILSQLVGP+
Subjt:  PDQCNEMCLFIEILTRNGSSYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGPA
A0A6N2N9U7 Uncharacterized protein ycf681.3e-2988.73Show/hide
Query:  PDQCNEMCLFIEILTRNGSSYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGPA
        PDQCN MCLFI +LTRNGSSYF KTCHGKEEGGNKH WRAQY GELYAAFGKDESLPKRN LILSQLVGP+
Subjt:  PDQCNEMCLFIEILTRNGSSYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGPA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTCAAGTGTAGAACTTTGCTCATTTCTTGGTCGTCGACCCCTCAGTCACTCACTACGAACGCCCCCGATCAGTGCAATGAGATGTGTCTATTTATCGAGATCTT
GACTCGAAATGGGAGCAGTTATTTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACATTTGGAGAGCGCAGTACAACGGAGAGTTGTATGCAGCGTTCG
GGAAGGATGAATCGCTCCCGAAAAGGAATCGATTGATTCTCTCCCAATTGGTTGGACCGGCCCAAGGTACGTGGAGATCAGAAGAGGATGATTACCGGGCTTGGCAATGG
GCCGAGCCCGATAATCATCCTCTTTTGATCTCCACGGGCCGAGCCCAGCTCAACGCTGAGCACAGGACGGCTCGATTCAATCCAGTTCTATCGATGACTTCGTTGGTCCT
CTTCTATTCTGATGGCAAGTTTGTTGGGGTGTTCTATGTTATGATCATTAGCATTGGCATGATATCAATTTACAGATGGGTTCATCTCTGTTCACCTTATCCTGCTCTTA
TTTTGCCTGAATATCCCTCTTGGGTTAAGAGGGAATGGCAAAATGCCATTAATTTCATTGGATGTTCTAGAGTTATGCCTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTCAAGTGTAGAACTTTGCTCATTTCTTGGTCGTCGACCCCTCAGTCACTCACTACGAACGCCCCCGATCAGTGCAATGAGATGTGTCTATTTATCGAGATCTT
GACTCGAAATGGGAGCAGTTATTTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACATTTGGAGAGCGCAGTACAACGGAGAGTTGTATGCAGCGTTCG
GGAAGGATGAATCGCTCCCGAAAAGGAATCGATTGATTCTCTCCCAATTGGTTGGACCGGCCCAAGGTACGTGGAGATCAGAAGAGGATGATTACCGGGCTTGGCAATGG
GCCGAGCCCGATAATCATCCTCTTTTGATCTCCACGGGCCGAGCCCAGCTCAACGCTGAGCACAGGACGGCTCGATTCAATCCAGTTCTATCGATGACTTCGTTGGTCCT
CTTCTATTCTGATGGCAAGTTTGTTGGGGTGTTCTATGTTATGATCATTAGCATTGGCATGATATCAATTTACAGATGGGTTCATCTCTGTTCACCTTATCCTGCTCTTA
TTTTGCCTGAATATCCCTCTTGGGTTAAGAGGGAATGGCAAAATGCCATTAATTTCATTGGATGTTCTAGAGTTATGCCTTTGTAA
Protein sequenceShow/hide protein sequence
MEFKCRTLLISWSSTPQSLTTNAPDQCNEMCLFIEILTRNGSSYFTKTCHGKEEGGNKHIWRAQYNGELYAAFGKDESLPKRNRLILSQLVGPAQGTWRSEEDDYRAWQW
AEPDNHPLLISTGRAQLNAEHRTARFNPVLSMTSLVLFYSDGKFVGVFYVMIISIGMISIYRWVHLCSPYPALILPEYPSWVKREWQNAINFIGCSRVMPL