; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc04g00460 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc04g00460
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionKRR1 small subunit processome component
Genome locationchr4:331841..336522
RNA-Seq ExpressionMoc04g00460
SyntenyMoc04g00460
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR024166 - Ribosomal RNA assembly KRR1
IPR036612 - K Homology domain, type 1 superfamily
IPR041174 - Krr1, KH1 domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012057.1 mis3 [Cucurbita argyrosperma subsp. argyrosperma]5.1e-18891.4Show/hide
Query:  VEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPY
        +EQQQ K KHKGKHDKPKPWDEDPNIDRWKV+KFDPSWNEGGMLEVSSFSTLFP YREKYLQ+AWP+VKSALKEF +AC+LNLVEGSMTVSTTRKT+DPY
Subjt:  VEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPY

Query:  IIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCML
        IIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLV KK+R VKRR+ LVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE+CM+
Subjt:  IIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCML

Query:  NKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAE
        NKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK+K VKQKK KSK+KKPYTPFPPPQ PS+IDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAE
Subjt:  NKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAE

Query:  NKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK
        NKRKREAAFVPPKEPPKQDT  DGDNNDIATMAKALKEKAKALGKRKAAE+IN E+YIASSS+Q HFKK+SK
Subjt:  NKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK

XP_022148021.1 KRR1 small subunit processome component [Momordica charantia]4.7e-210100Show/hide
Query:  MEENGYVDVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVST
        MEENGYVDVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVST
Subjt:  MEENGYVDVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVST

Query:  TRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVR
        TRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVR
Subjt:  TRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVR

Query:  RIVEDCMLNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQE
        RIVEDCMLNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQE
Subjt:  RIVEDCMLNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQE

Query:  KQAEKTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT
        KQAEKTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT
Subjt:  KQAEKTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT

XP_022952886.1 KRR1 small subunit processome component homolog [Cucurbita moschata]6.7e-18891.15Show/hide
Query:  DVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDP
        ++EQQQ K KHKGKHDKPKPWDEDPNIDRWKV+KFD SWNEGGMLEVSSFSTLFP YREKYLQ+AWP+VKSALKEF +AC+LNLVEGSMTVSTTRKT+DP
Subjt:  DVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDP

Query:  YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCM
        YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLV KK+R VKRR+ LVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE+CM
Subjt:  YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCM

Query:  LNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA
        +NKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK+KTVKQKK KSK+KKPYTPFPPPQ PS+IDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA
Subjt:  LNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA

Query:  ENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK
        ENKRKREAAFVPPKEPPKQDT  DGDNNDIATMAKALKEKAKALGKRKAAE+IN E+YIASSS+Q HFKK+SK
Subjt:  ENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK

XP_022969421.1 KRR1 small subunit processome component homolog [Cucurbita maxima]3.3e-18790.88Show/hide
Query:  DVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDP
        ++EQQQ K KHKGKHDKPKPWDEDPNIDRWKV+KFDPSWNEGGMLEVSSFSTLFP YREKYLQ+AWP+VKSALKEF +ACELNLVEGSMTVSTTRKT+DP
Subjt:  DVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDP

Query:  YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCM
        YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLV KK+R VKRR+ LVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE+CM
Subjt:  YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCM

Query:  LNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA
        +NKMHPVYNIKILMMKKELANDPALA+ENWDRFLPKFK+KTVKQKK KSK+KKPYTPFPPPQ PS+IDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA
Subjt:  LNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA

Query:  ENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK
        ENKRKREA+FVPPKE PKQDTK DGDNNDIATMAKALKEKAKALGKRKAAE+IN E+YIA SS+Q HFKK+SK
Subjt:  ENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK

XP_023511730.1 KRR1 small subunit processome component homolog [Cucurbita pepo subsp. pepo]3.9e-18891.42Show/hide
Query:  DVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDP
        ++EQQQ K KHKGKHDKPKPWDEDPNIDRW V+KFDPSWNEGGMLEVSSFSTLFP YREKYLQ+AWP+VKSALKEF +ACELNLVEGSMTVSTTRKT+DP
Subjt:  DVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDP

Query:  YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCM
        YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLV KK+R VKRR+ LVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE+CM
Subjt:  YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCM

Query:  LNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA
        +NKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK+KTVKQKK KSK+KKPYTPFPPPQ PS+IDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA
Subjt:  LNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA

Query:  ENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK
        ENKRKREAAFVPPKEPPKQDT  DGDNNDIATMAKALKEKAKALGKRKAAE+IN E+YIASSS+Q HFKK+SK
Subjt:  ENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK

TrEMBL top hitse value%identityAlignment
A0A0A0K7G6 KRR1 small subunit processome component2.5e-18087.73Show/hide
Query:  DVEQQ-QGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRD
        D+EQQ Q K KHKGKHDKPKPWDEDPNIDRWKV+KFDPSWNE GMLEVSSFSTLFP YREKYL++ WP+VKSALKEF +  ELNL+EGSMTVSTTRKTRD
Subjt:  DVEQQ-QGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRD

Query:  PYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDC
        PYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLV KK+R VKRR+ LVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRR+VE+C
Subjt:  PYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDC

Query:  MLNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKT
        M+NKMHPVYNIKILMM+KELANDPALANENWDRFLPKFK+KTVKQKK KSK KK YTPFPPPQQPS+IDIQLETGEYFL++KKKSAKKWQ+KQEKQAEKT
Subjt:  MLNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKT

Query:  AENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT
        A+NKRKREAAFVPPKE PKQDTK DGD NDIA MAK+LKEKAKA GKRKAAETIN E+YIASSS++P FKK+SKT
Subjt:  AENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT

A0A5D3CP78 KRR1 small subunit processome component2.2e-18188.53Show/hide
Query:  DVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDP
        D+EQQQ K KHKGKHDKPKPWDEDPNIDRWKV+KFDPSWNE GMLEVSSFSTLFP YREKYL++ WP+VKSALKEF +  ELNL+EGSMTVSTTRKTRDP
Subjt:  DVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDP

Query:  YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCM
        YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLV KK+R VKRR+ LVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRR+VE+CM
Subjt:  YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCM

Query:  LNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA
        +NKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK+KTVKQKK KSK KK YTPFPPPQQPS+IDIQLETGEYFL++KKKSAKKWQ+KQEKQAEKTA
Subjt:  LNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA

Query:  ENKRKREAAFVPPKEPPK-QDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT
        ENKRKREAAFVPPKE PK QDT+ DGD NDIA MAKALKEKAKA GKRKAAETIN E+YIASSS+QP FKK+SKT
Subjt:  ENKRKREAAFVPPKEPPK-QDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT

A0A6J1D441 KRR1 small subunit processome component2.3e-210100Show/hide
Query:  MEENGYVDVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVST
        MEENGYVDVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVST
Subjt:  MEENGYVDVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVST

Query:  TRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVR
        TRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVR
Subjt:  TRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVR

Query:  RIVEDCMLNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQE
        RIVEDCMLNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQE
Subjt:  RIVEDCMLNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQE

Query:  KQAEKTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT
        KQAEKTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT
Subjt:  KQAEKTAENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT

A0A6J1GLG6 KRR1 small subunit processome component3.2e-18891.15Show/hide
Query:  DVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDP
        ++EQQQ K KHKGKHDKPKPWDEDPNIDRWKV+KFD SWNEGGMLEVSSFSTLFP YREKYLQ+AWP+VKSALKEF +AC+LNLVEGSMTVSTTRKT+DP
Subjt:  DVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDP

Query:  YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCM
        YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLV KK+R VKRR+ LVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE+CM
Subjt:  YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCM

Query:  LNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA
        +NKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK+KTVKQKK KSK+KKPYTPFPPPQ PS+IDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA
Subjt:  LNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA

Query:  ENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK
        ENKRKREAAFVPPKEPPKQDT  DGDNNDIATMAKALKEKAKALGKRKAAE+IN E+YIASSS+Q HFKK+SK
Subjt:  ENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK

A0A6J1HWB5 KRR1 small subunit processome component1.6e-18790.88Show/hide
Query:  DVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDP
        ++EQQQ K KHKGKHDKPKPWDEDPNIDRWKV+KFDPSWNEGGMLEVSSFSTLFP YREKYLQ+AWP+VKSALKEF +ACELNLVEGSMTVSTTRKT+DP
Subjt:  DVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDP

Query:  YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCM
        YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLV KK+R VKRR+ LVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVE+CM
Subjt:  YIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCM

Query:  LNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA
        +NKMHPVYNIKILMMKKELANDPALA+ENWDRFLPKFK+KTVKQKK KSK+KKPYTPFPPPQ PS+IDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA
Subjt:  LNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTA

Query:  ENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK
        ENKRKREA+FVPPKE PKQDTK DGDNNDIATMAKALKEKAKALGKRKAAE+IN E+YIA SS+Q HFKK+SK
Subjt:  ENKRKREAAFVPPKEPPKQDTKSDGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSK

SwissProt top hitse value%identityAlignment
B3LU25 KRR1 small subunit processome component2.8e-9660.78Show/hide
Query:  HDKPKPWDEDPNIDRWKVDKFDPSWNEGG--MLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKARDLIKL
        H++ KPWD D +ID+WK+++F    N  G    E SSF TLFP+YRE YL+  W  V  AL +  +AC L+LVEGSMTV TTRKT DP II+KARDLIKL
Subjt:  HDKPKPWDEDPNIDRWKVDKFDPSWNEGG--MLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKARDLIKL

Query:  LSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPVYNIKI
        L+RSVP PQA+KIL D+M CD+IKIGN V  K+R VKRRQ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDCM N +HP+Y+IK 
Subjt:  LSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPVYNIKI

Query:  LMMKKELANDPALANENWDRFLPKFKRKTV---KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKREAA
        LM+K+ELA  P LANE+W RFLP FK++ V   K KK ++ EKK YTPFPP Q P K+D+++E+GEYFLS ++K  KK  E++EKQ E+  E + +R   
Subjt:  LMMKKELANDPALANENWDRFLPKFKRKTV---KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKREAA

Query:  FVPPKE
        F+ P+E
Subjt:  FVPPKE

B5VEQ2 KRR1 small subunit processome component2.8e-9660.78Show/hide
Query:  HDKPKPWDEDPNIDRWKVDKFDPSWNEGG--MLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKARDLIKL
        H++ KPWD D +ID+WK+++F    N  G    E SSF TLFP+YRE YL+  W  V  AL +  +AC L+LVEGSMTV TTRKT DP II+KARDLIKL
Subjt:  HDKPKPWDEDPNIDRWKVDKFDPSWNEGG--MLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKARDLIKL

Query:  LSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPVYNIKI
        L+RSVP PQA+KIL D+M CD+IKIGN V  K+R VKRRQ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDCM N +HP+Y+IK 
Subjt:  LSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPVYNIKI

Query:  LMMKKELANDPALANENWDRFLPKFKRKTV---KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKREAA
        LM+K+ELA  P LANE+W RFLP FK++ V   K KK ++ EKK YTPFPP Q P K+D+++E+GEYFLS ++K  KK  E++EKQ E+  E + +R   
Subjt:  LMMKKELANDPALANENWDRFLPKFKRKTV---KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKREAA

Query:  FVPPKE
        F+ P+E
Subjt:  FVPPKE

C8Z430 KRR1 small subunit processome component2.8e-9660.78Show/hide
Query:  HDKPKPWDEDPNIDRWKVDKFDPSWNEGG--MLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKARDLIKL
        H++ KPWD D +ID+WK+++F    N  G    E SSF TLFP+YRE YL+  W  V  AL +  +AC L+LVEGSMTV TTRKT DP II+KARDLIKL
Subjt:  HDKPKPWDEDPNIDRWKVDKFDPSWNEGG--MLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKARDLIKL

Query:  LSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPVYNIKI
        L+RSVP PQA+KIL D+M CD+IKIGN V  K+R VKRRQ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDCM N +HP+Y+IK 
Subjt:  LSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPVYNIKI

Query:  LMMKKELANDPALANENWDRFLPKFKRKTV---KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKREAA
        LM+K+ELA  P LANE+W RFLP FK++ V   K KK ++ EKK YTPFPP Q P K+D+++E+GEYFLS ++K  KK  E++EKQ E+  E + +R   
Subjt:  LMMKKELANDPALANENWDRFLPKFKRKTV---KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKREAA

Query:  FVPPKE
        F+ P+E
Subjt:  FVPPKE

O74777 KRR1 small subunit processome component homolog1.8e-9860.59Show/hide
Query:  KHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKARDLIKLL
        ++ + KPWD D +ID WK++ F    ++   LE SSF+TLFP+YREKYL+E WP V  AL +F + C L+LVEGSMTV TTRKT DPY I+ ARDLIKLL
Subjt:  KHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKARDLIKLL

Query:  SRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPVYNIKIL
        +RSVP PQA+KI+ D + CDIIKIGN++  K+R VKRRQ L+G N  TLKALE+LT CYILVQG TVA MG +KGLK+VRRIVEDCM N +HP+Y+IK L
Subjt:  SRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPVYNIKIL

Query:  MMKKELANDPALANENWDRFLPKFKRKTV-KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKREAAFVP
        M+K+ELA DP LANE+WDRFLP+FK++ V ++K AK +E K YTPFPP Q PSK+D+++E+GEYFL  ++K  KK  EK+E+Q EK  E +++R  AF+P
Subjt:  MMKKELANDPALANENWDRFLPKFKRKTV-KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKREAAFVP

Query:  PKEPPKQ
        P+E  K+
Subjt:  PKEPPKQ

P25586 KRR1 small subunit processome component2.8e-9660.78Show/hide
Query:  HDKPKPWDEDPNIDRWKVDKFDPSWNEGG--MLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKARDLIKL
        H++ KPWD D +ID+WK+++F    N  G    E SSF TLFP+YRE YL+  W  V  AL +  +AC L+LVEGSMTV TTRKT DP II+KARDLIKL
Subjt:  HDKPKPWDEDPNIDRWKVDKFDPSWNEGG--MLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKARDLIKL

Query:  LSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPVYNIKI
        L+RSVP PQA+KIL D+M CD+IKIGN V  K+R VKRRQ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKGLK+VRR+VEDCM N +HP+Y+IK 
Subjt:  LSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPVYNIKI

Query:  LMMKKELANDPALANENWDRFLPKFKRKTV---KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKREAA
        LM+K+ELA  P LANE+W RFLP FK++ V   K KK ++ EKK YTPFPP Q P K+D+++E+GEYFLS ++K  KK  E++EKQ E+  E + +R   
Subjt:  LMMKKELANDPALANENWDRFLPKFKRKTV---KQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKREAA

Query:  FVPPKE
        F+ P+E
Subjt:  FVPPKE

Arabidopsis top hitse value%identityAlignment
AT5G08420.1 RNA-binding KH domain-containing protein3.1e-15174.66Show/hide
Query:  KKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKAR
        ++K KGKH+KPKPWD+DPNIDRW ++KFDP+WN  GM E S+FSTLFP+YREKYLQE WP V+SALKE+ VAC+LNLVEGSMTVSTTRKTRDPYIIVKAR
Subjt:  KKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYIIVKAR

Query:  DLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPV
        DLIKLLSRSVPAPQAIKIL+DE+QCDIIKIGNLV  K+R VKRRQ LVGPNSSTLKALEILT CYILVQG+TVAAMG FKGLKQ+RRIVEDC+ N MHPV
Subjt:  DLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPV

Query:  YNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKRE
        Y+IK LMMKKEL  DPALANE+WDRFLP F++K VKQKK KSKEKKPYTPFPPPQ PSKID+QLE+GEYF+SDKKKS KKWQEKQEKQ+EK+ ENKRKR+
Subjt:  YNIKILMMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKRE

Query:  AAFVPPKEPPKQDT---KSDGDNNDIATMAKALKEKAKALGK-RKAAETINAESYIAS-SSNQPHFKKKSK
        A+F+PP+EP   ++   KS+   NDI  +  +LK K K L K +K  E +NAE YIA  SS+     KKSK
Subjt:  AAFVPPKEPPKQDT---KSDGDNNDIATMAKALKEKAKALGK-RKAAETINAESYIAS-SSNQPHFKKKSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGAATGGCTACGTGGATGTTGAGCAACAGCAAGGGAAAAAGAAGCATAAGGGCAAGCACGACAAGCCGAAGCCATGGGATGAAGATCCTAATATTGACCGCTG
GAAAGTCGACAAGTTTGATCCCTCCTGGAATGAAGGTGGCATGCTCGAAGTCAGCTCCTTCTCTACTCTGTTTCCCGAGTACAGAGAAAAGTATTTGCAAGAAGCATGGC
CGATTGTTAAGTCTGCGTTGAAAGAGTTTCGTGTTGCCTGTGAGCTGAATCTGGTTGAAGGATCAATGACGGTTTCAACAACCAGGAAGACTAGGGATCCATATATTATT
GTCAAGGCAAGGGATCTTATCAAACTCTTGTCAAGAAGCGTACCTGCTCCTCAGGCAATTAAAATACTGGACGATGAAATGCAATGTGATATCATTAAGATTGGGAATTT
GGTAGGCAAGAAGGATCGAATGGTTAAAAGAAGGCAACATCTTGTGGGCCCAAATTCATCAACTTTAAAGGCGCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGG
GCAATACAGTTGCTGCAATGGGTTCATTCAAAGGTTTAAAGCAAGTCAGGAGGATAGTGGAAGACTGTATGCTGAATAAAATGCATCCTGTATACAATATTAAGATTCTC
ATGATGAAGAAAGAGCTTGCTAATGATCCAGCACTCGCAAATGAAAATTGGGATAGGTTTCTTCCAAAATTCAAGAGGAAAACTGTTAAACAAAAGAAGGCCAAGAGTAA
AGAGAAGAAGCCGTATACACCTTTTCCTCCTCCTCAGCAACCTAGCAAGATTGATATACAATTGGAAACTGGAGAATACTTTTTAAGTGACAAAAAGAAGTCAGCAAAGA
AATGGCAGGAGAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGAGAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTAAGGAGCCTCCGAAGCAGGATACCAAATCT
GATGGGGATAACAACGATATAGCCACAATGGCAAAGGCCCTGAAGGAAAAGGCGAAGGCATTAGGGAAACGAAAAGCTGCGGAAACTATCAATGCGGAATCTTATATTGC
CTCATCTAGCAATCAGCCGCATTTCAAAAAGAAATCCAAGACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGAATGGCTACGTGGATGTTGAGCAACAGCAAGGGAAAAAGAAGCATAAGGGCAAGCACGACAAGCCGAAGCCATGGGATGAAGATCCTAATATTGACCGCTG
GAAAGTCGACAAGTTTGATCCCTCCTGGAATGAAGGTGGCATGCTCGAAGTCAGCTCCTTCTCTACTCTGTTTCCCGAGTACAGAGAAAAGTATTTGCAAGAAGCATGGC
CGATTGTTAAGTCTGCGTTGAAAGAGTTTCGTGTTGCCTGTGAGCTGAATCTGGTTGAAGGATCAATGACGGTTTCAACAACCAGGAAGACTAGGGATCCATATATTATT
GTCAAGGCAAGGGATCTTATCAAACTCTTGTCAAGAAGCGTACCTGCTCCTCAGGCAATTAAAATACTGGACGATGAAATGCAATGTGATATCATTAAGATTGGGAATTT
GGTAGGCAAGAAGGATCGAATGGTTAAAAGAAGGCAACATCTTGTGGGCCCAAATTCATCAACTTTAAAGGCGCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGG
GCAATACAGTTGCTGCAATGGGTTCATTCAAAGGTTTAAAGCAAGTCAGGAGGATAGTGGAAGACTGTATGCTGAATAAAATGCATCCTGTATACAATATTAAGATTCTC
ATGATGAAGAAAGAGCTTGCTAATGATCCAGCACTCGCAAATGAAAATTGGGATAGGTTTCTTCCAAAATTCAAGAGGAAAACTGTTAAACAAAAGAAGGCCAAGAGTAA
AGAGAAGAAGCCGTATACACCTTTTCCTCCTCCTCAGCAACCTAGCAAGATTGATATACAATTGGAAACTGGAGAATACTTTTTAAGTGACAAAAAGAAGTCAGCAAAGA
AATGGCAGGAGAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGAGAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTAAGGAGCCTCCGAAGCAGGATACCAAATCT
GATGGGGATAACAACGATATAGCCACAATGGCAAAGGCCCTGAAGGAAAAGGCGAAGGCATTAGGGAAACGAAAAGCTGCGGAAACTATCAATGCGGAATCTTATATTGC
CTCATCTAGCAATCAGCCGCATTTCAAAAAGAAATCCAAGACTTAA
Protein sequenceShow/hide protein sequence
MEENGYVDVEQQQGKKKHKGKHDKPKPWDEDPNIDRWKVDKFDPSWNEGGMLEVSSFSTLFPEYREKYLQEAWPIVKSALKEFRVACELNLVEGSMTVSTTRKTRDPYII
VKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVGKKDRMVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEDCMLNKMHPVYNIKIL
MMKKELANDPALANENWDRFLPKFKRKTVKQKKAKSKEKKPYTPFPPPQQPSKIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKTAENKRKREAAFVPPKEPPKQDTKS
DGDNNDIATMAKALKEKAKALGKRKAAETINAESYIASSSNQPHFKKKSKT